RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CPA6Q8N4T0 437 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 FBXO32Q969P5 355 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 EXOC4Q96A65 974 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 KCNK16Q96T55 309 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 FAM49BQ9NUQ9 324 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 TMEM30AQ9NV96 361 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 DUS2Q9NX74 493 aaKnown RBP18.66■□□□□ 0.58
NUP50-208ENST00000430547 GCNT4Q9P109 453 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 HMGXB4Q9UGU5 601 aa18.66■□□□□ 0.58
NUP50-208ENST00000430547 ZNF840PA6NDX5 716 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 CD58P19256 250 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 CCR3P51677 355 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 INCA1Q0VD86 236 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 WDR44Q5JSH3 913 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 ANKRD40Q6AI12 368 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 ISM2Q6H9L7 571 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 ELOA2Q8IYF1 753 aaPredicted RBP18.65■□□□□ 0.58
NUP50-208ENST00000430547 FUKQ8N0W3 1084 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 CRYBG2Q8N1P7 616 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 FBXL13Q8NEE6 735 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 SLC2A14Q8TDB8 520 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 SH3RF2Q8TEC5 729 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 OSCP1Q8WVF1 389 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 OVCA2Q8WZ82 227 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 ATP2A3Q93084 1043 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 NT5C1AQ9BXI3 368 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 HPS4Q9NQG7 708 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
NUP50-208ENST00000430547 TRIM49BA6NDI0 452 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 LMNAP02545 664 aaKnown RBP18.64■□□□□ 0.57
NUP50-208ENST00000430547 FAM200BP0CF97 657 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 ARSAP15289 507 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 ADORA2BP29275 332 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 SLC5A3P53794 718 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 PAQR9Q6ZVX9 377 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 RIN3Q8TB24 985 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 ATRIPQ8WXE1 791 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 APOBEC3GQ9HC16 384 aaKnown RBP18.64■□□□□ 0.57
NUP50-208ENST00000430547 PRMT8Q9NR22 394 aaPredicted RBP18.64■□□□□ 0.57
NUP50-208ENST00000430547 RBM12Q9NTZ6 932 aaKnown RBP18.64■□□□□ 0.57
NUP50-208ENST00000430547 RAB20Q9NX57 234 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 WNT6Q9Y6F9 365 aa18.64■□□□□ 0.57
NUP50-208ENST00000430547 TCF3P15923 654 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 GRSF1Q12849 480 aaKnown RBP eCLIP18.63■□□□□ 0.57
NUP50-208ENST00000430547 NR1H3Q13133 447 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 TSSK4Q6SA08 328 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 SPEM1Q8N4L4 309 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 TTC39CQ8N584 583 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 C12orf29Q8N999 325 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 DHTKD1Q96HY7 919 aaPredicted RBP18.63■□□□□ 0.57
NUP50-208ENST00000430547 FAM126AQ9BYI3 521 aaPredicted RBP18.63■□□□□ 0.57
NUP50-208ENST00000430547 ECT2Q9H8V3 914 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 COMMD8Q9NX08 183 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 ZSCAN32Q9NX65 697 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 ARMCX3Q9UH62 379 aaPredicted RBP18.63■□□□□ 0.57
NUP50-208ENST00000430547 MAN1B1Q9UKM7 699 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 PCDHGA2Q9Y5H1 932 aa18.63■□□□□ 0.57
NUP50-208ENST00000430547 LEFTY2O00292 366 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
NUP50-208ENST00000430547 NFATC1O95644 943 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 OAS1P00973 400 aaKnown RBP18.62■□□□□ 0.57
NUP50-208ENST00000430547 MBL2P11226 248 aaPredicted RBP18.62■□□□□ 0.57
NUP50-208ENST00000430547 CXCL12P48061 93 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 PMS1P54277 932 aaKnown RBP18.62■□□□□ 0.57
NUP50-208ENST00000430547 NRLP54845 237 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 MAP3K7CLP57077 242 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 SLC7A9P82251 487 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 KLHL10Q6JEL2 608 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 MAMSTRQ6ZN01 415 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 DDX42Q86XP3 938 aaKnown RBP eCLIP18.62■□□□□ 0.57
NUP50-208ENST00000430547 ZC3H3Q8IXZ2 948 aaKnown RBP18.62■□□□□ 0.57
NUP50-208ENST00000430547 SYNPOQ8N3V7 929 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 SCAMP5Q8TAC9 235 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 CYFIP2Q96F07 1278 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 FAXDC2Q96IV6 333 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 TWNKQ96RR1 684 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 SMOQ99835 787 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 NACA2Q9H009 215 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 FBXO44Q9H4M3 255 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 METTL14Q9HCE5 456 aaKnown RBP18.62■□□□□ 0.57
NUP50-208ENST00000430547 SMPD4Q9NXE4 827 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 CPQQ9Y646 472 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 ATG2BQ96BY7 2078 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 FAM186AA6NE01 2351 aa18.62■□□□□ 0.57
NUP50-208ENST00000430547 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 OTOL1A6NHN0 477 aaPredicted RBP18.61■□□□□ 0.57
NUP50-208ENST00000430547 TNFRSF10BO14763 440 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 CILPO75339 1184 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 MCCD1P59942 119 aaPredicted RBP18.61■□□□□ 0.57
NUP50-208ENST00000430547 CCINQ13939 588 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 EML3Q32P44 896 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 CCDC40Q4G0X9 1142 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 ZNF394Q53GI3 561 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 SEMA4DQ92854 862 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 JAKMIP2Q96AA8 810 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 HNRNPABQ99729 332 aaKnown RBP18.61■□□□□ 0.57
NUP50-208ENST00000430547 HINFPQ9BQA5 517 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 RNF38Q9H0F5 515 aa18.61■□□□□ 0.57
NUP50-208ENST00000430547 CSNK1G1Q9HCP0 422 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms