RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TGS1Q96RS0 853 aaKnown RBP16.12■□□□□ 0.17
CPSF7-202ENST00000394888 TSPAN16Q9UKR8 245 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 RASA4BC9J798 803 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 RASA4O43374 803 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 PDIA2Q13087 525 aaKnown RBP16.12■□□□□ 0.17
CPSF7-202ENST00000394888 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 KBTBD7Q8WVZ9 684 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 CFAP57Q96MR6 1250 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 SLC4A5Q9BY07 1137 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 EIF2AQ9BY44 585 aaKnown RBP16.12■□□□□ 0.17
CPSF7-202ENST00000394888 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
CPSF7-202ENST00000394888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.11■□□□□ 0.17
CPSF7-202ENST00000394888 M0QYV0 167 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 SGK1O00141 431 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 VIMP08670 466 aaKnown RBP16.11■□□□□ 0.17
CPSF7-202ENST00000394888 VDRP11473 427 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 IGFBP6P24592 240 aaPredicted RBP16.11■□□□□ 0.17
CPSF7-202ENST00000394888 OTUD1Q5VV17 481 aaPredicted RBP16.11■□□□□ 0.17
CPSF7-202ENST00000394888 PPIL6Q8IXY8 311 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 DPEP3Q9H4B8 488 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 VGLL3A8MV65 326 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 ALADP13716 330 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 KCNJ2P63252 427 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 SWT1Q5T5J6 900 aaKnown RBP16.11■□□□□ 0.17
CPSF7-202ENST00000394888 ICE2Q659A1 982 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 FAM71DQ8N9W8 422 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 CLEC4CQ8WTT0 213 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 LRRN4Q8WUT4 740 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 USP6NLQ92738 828 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 ITGA11Q9UKX5 1188 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 TRIM33Q9UPN9 1127 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 USP3Q9Y6I4 520 aa16.11■□□□□ 0.17
CPSF7-202ENST00000394888 EXOC1LA0A1B0GW35 172 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 FAM47DPA6NHR8 397 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 MED7O43513 233 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 CD19P15391 556 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 MAGEA3P43357 314 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 PHKA2P46019 1235 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 HDAC4P56524 1084 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 SLC10A2Q12908 348 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-202ENST00000394888 ACAP1Q15027 740 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 NUGGCQ68CJ6 796 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 SLC9A4Q6AI14 798 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 ACSS3Q9H6R3 686 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 RNF19AQ9NV58 838 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 DPP3Q9NY33 737 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 PAPSS1O43252 624 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-202ENST00000394888 KRT7P08729 469 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 CCNB1P14635 433 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 GRM5P41594 1212 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 ADAM17P78536 824 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 PCDH19Q8TAB3 1148 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 RXFP2Q8WXD0 754 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 SGSM3Q96HU1 749 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 SNX27Q96L92 541 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 TTC25Q96NG3 672 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 FRMD8P1Q9BZ68 369 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-202ENST00000394888 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 SPTLC1O15269 473 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 AVILO75366 819 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 MMP3P08254 477 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 MAGEA6P43360 314 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 LAMC2Q13753 1193 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 TMEM132DQ14C87 1099 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 RNF43Q68DV7 783 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 BNIPLQ7Z465 357 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 SPATA21Q7Z572 469 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 TAX1BP1Q86VP1 789 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 C4orf33Q8N1A6 199 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 C18orf25Q96B23 403 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-202ENST00000394888 B3GNT5Q9BYG0 378 aa16.1■□□□□ 0.17
CPSF7-202ENST00000394888 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 ETV4P43268 484 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 ATXN1P54253 815 aaKnown RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 HIF1AQ16665 826 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 CAPN12Q6ZSI9 719 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 PRPF39Q86UA1 669 aaKnown RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 CAND1Q86VP6 1230 aaKnown RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 FBXO36Q8NEA4 188 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 TMEM40Q8WWA1 233 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 CENPIQ92674 756 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 PTPRN2Q92932 1015 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 RNF181Q9P0P0 153 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 DHRS4L1P0CG22 281 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 PDK4Q16654 411 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 BANPQ8N9N5 519 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 HSPH1Q92598 858 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 TRABDQ9H4I3 376 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 SSU72Q9NP77 194 aaKnown RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 SMYD2Q9NRG4 433 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 SLC24A2Q9UI40 661 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 GRAP2O75791 330 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 IGHA2P01877 340 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 ZKSCAN8Q15776 578 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 C10orf82Q8WW14 230 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms