RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 CEP41Q9BYV8 373 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 TRIM15Q9C019 465 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 CCDC134Q9H6E4 229 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 FBXO6Q9NRD1 293 aaPredicted RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 AJAP1Q9UKB5 411 aaPredicted RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 C3orf70A6NLC5 250 aaPredicted RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 NAMPTP43490 491 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 CDK16Q00536 496 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 C16orf89Q6UX73 402 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 ACOT1Q86TX2 421 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 PTPRN2Q92932 1015 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 SAR1AQ9NR31 198 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 TSR3Q9UJK0 312 aaKnown RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 ATXN2Q99700 1313 aaKnown RBP17.23■□□□□ 0.35
SCAP-201ENST00000265565 RASSF9O75901 435 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 RALBP11234 206 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 TLCD1Q96CP7 247 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 VCPIP1Q96JH7 1222 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 ZNF518BQ9C0D4 1074 aa17.23■□□□□ 0.35
SCAP-201ENST00000265565 GLRA3O75311 464 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 TCF7P36402 384 aaPredicted RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 PTGER2P43116 358 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 CLCN3P51790 818 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 NUP93Q8N1F7 819 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 SEMA4DQ92854 862 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 ANKRD27Q96NW4 1050 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 ILKAPQ9H0C8 392 aaPredicted RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 S100BP04271 92 aaPredicted RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 IL10P22301 178 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 BAG6P46379 1132 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 PPM1FP49593 454 aaPredicted RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 TSTA3Q13630 321 aaPredicted RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 ITGA9Q13797 1035 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 C16orf46Q6P387 395 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 ZNF572Q7Z3I7 529 aaPredicted RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 TRABD2AQ86V40 505 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 ECHDC2Q86YB7 292 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 SLC9A9Q8IVB4 645 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 APOPT1Q96IL0 206 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 CNPY3Q9BT09 278 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 PSMG1O95456 288 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 OTOAQ7RTW8 1153 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 CPNE8Q86YQ8 564 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 CDC26Q8NHZ8 85 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 SARS2Q9NP81 518 aaKnown RBP17.22■□□□□ 0.35
SCAP-201ENST00000265565 PXMP2Q9NR77 195 aa17.22■□□□□ 0.35
SCAP-201ENST00000265565 LIASO43766 372 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 ATP4AP20648 1035 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 PGM5Q15124 567 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 FAM131BQ86XD5 332 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 PYDC1Q8WXC3 89 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 MKL1Q969V6 931 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 C12orf65Q9H3J6 166 aaKnown RBP17.21■□□□□ 0.35
SCAP-201ENST00000265565 SOX13Q9UN79 622 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 UBA6A0AVT1 1052 aaPredicted RBP17.21■□□□□ 0.35
SCAP-201ENST00000265565 ITGB5P18084 799 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 PTPN11Q06124 597 aaPredicted RBP17.21■□□□□ 0.35
SCAP-201ENST00000265565 STILQ15468 1287 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 IRGCQ6NXR0 463 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 NCLNQ969V3 563 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAP-201ENST00000265565 PIM2Q9P1W9 311 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 SUPT20HL2P0C7V6 817 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 RARBP10826 455 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 TGM2P21980 687 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 GLRA4Q5JXX5 417 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 TMTC4Q5T4D3 741 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 FAM13CQ8NE31 585 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 TFB1MQ8WVM0 346 aaKnown RBP17.21■□□□□ 0.35
SCAP-201ENST00000265565 TNIP3Q96KP6 325 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.35
SCAP-201ENST00000265565 ZNF184Q99676 751 aaPredicted RBP17.21■□□□□ 0.35
SCAP-201ENST00000265565 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 LZTS1Q9Y250 596 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 ACTL7BQ9Y614 415 aa17.21■□□□□ 0.35
SCAP-201ENST00000265565 SDR42E2A6NKP2 422 aa17.21■□□□□ 0.34
SCAP-201ENST00000265565 EEF2KO00418 725 aaKnown RBP17.21■□□□□ 0.34
SCAP-201ENST00000265565 FKBP6O75344 327 aa17.21■□□□□ 0.34
SCAP-201ENST00000265565 LSM8O95777 96 aaKnown RBP17.21■□□□□ 0.34
SCAP-201ENST00000265565 CYLC2Q14093 348 aaPredicted RBP17.21■□□□□ 0.34
SCAP-201ENST00000265565 PDK1Q15118 436 aa17.21■□□□□ 0.34
SCAP-201ENST00000265565 MAPRE2Q15555 327 aa17.21■□□□□ 0.34
SCAP-201ENST00000265565 NFIL3Q16649 462 aa17.21■□□□□ 0.34
SCAP-201ENST00000265565 N4BP2L1Q5TBK1 243 aaPredicted RBP17.21■□□□□ 0.34
SCAP-201ENST00000265565 CDYLQ9Y232 598 aa17.21■□□□□ 0.34
SCAP-201ENST00000265565 MIPP30301 263 aa17.2■□□□□ 0.34
SCAP-201ENST00000265565 GTF2BQ00403 316 aa17.2■□□□□ 0.34
SCAP-201ENST00000265565 TBCCQ15814 346 aa17.2■□□□□ 0.34
SCAP-201ENST00000265565 SAMD7Q7Z3H4 446 aa17.2■□□□□ 0.34
SCAP-201ENST00000265565 IL31RAQ8NI17 732 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms