RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B STT4P37297 1900 aa-1.97□□□□□ -2.72
snR39BsnR39B BUD4P47136 1447 aa-1.97□□□□□ -2.72
snR39BsnR39B TIM11P81449 96 aaPredicted RBP-1.97□□□□□ -2.72
snR39BsnR39B YDR029WQ12111 104 aa-1.97□□□□□ -2.72
snR39BsnR39B PBI2P0CT04 75 aaKnown RBP-1.98□□□□□ -2.73
snR39BsnR39B SUI1P32911 108 aaKnown RBP-1.98□□□□□ -2.73
snR39BsnR39B RSM18P40033 138 aa-1.98□□□□□ -2.73
snR39BsnR39B TOS6P48560 102 aa-1.98□□□□□ -2.73
snR39BsnR39B DNA2P38859 1522 aa-1.98□□□□□ -2.73
snR39BsnR39B SPO14P36126 1683 aa-1.99□□□□□ -2.73
snR39BsnR39B YJL197C-AP0C5P0 93 aa-1.99□□□□□ -2.73
snR39BsnR39B PET54P10834 293 aa-1.99□□□□□ -2.73
snR39BsnR39B YCR101CP25607 182 aa-1.99□□□□□ -2.73
snR39BsnR39B DER1P38307 211 aa-1.99□□□□□ -2.73
snR39BsnR39B SIP18P50263 79 aa-1.99□□□□□ -2.73
snR39BsnR39B MAK3Q03503 176 aa-1.99□□□□□ -2.73
snR39BsnR39B TRM732Q03496 1420 aa-2□□□□□ -2.73
snR39BsnR39B HMRA2P0CY13 119 aa-2□□□□□ -2.73
snR39BsnR39B YOR289WQ12012 251 aaPredicted RBP-2□□□□□ -2.73
snR39BsnR39B COX7P10174 60 aa-2.01□□□□□ -2.73
snR39BsnR39B IMP2P46972 177 aa-2.01□□□□□ -2.73
snR39BsnR39B PAU12P53343 120 aa-2.01□□□□□ -2.73
snR39BsnR39B YLL006W-AQ3E814 58 aa-2.01□□□□□ -2.73
snR39BsnR39B VTH1P40438 1549 aa-2.01□□□□□ -2.73
snR39BsnR39B VTH2P40890 1549 aa-2.01□□□□□ -2.73
snR39BsnR39B TY1B-NL2Q99337 1749 aaKnown RBP-2.02□□□□□ -2.73
snR39BsnR39B EDC1P53080 175 aaPredicted RBP-2.02□□□□□ -2.73
snR39BsnR39B IRA2P19158 3079 aa-2.02□□□□□ -2.73
snR39BsnR39B TY2B-LR1P0C2J3 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-FP0CX63 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-GR2P0CX64 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-CP25384 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-DR2Q03494 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-DR3Q07791 1770 aaKnown RBP-2.03□□□□□ -2.73
snR39BsnR39B TY2B-OR1Q12113 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-DR1Q12472 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-BQ12491 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B TY2B-OR2Q12501 1770 aa-2.03□□□□□ -2.73
snR39BsnR39B YGL204CP53089 101 aa-2.03□□□□□ -2.73
snR39BsnR39B ERV14P53173 138 aa-2.03□□□□□ -2.73
snR39BsnR39B YGL258W-AQ3E740 77 aa-2.03□□□□□ -2.73
snR39BsnR39B SDH6Q3E785 79 aa-2.03□□□□□ -2.73
snR39BsnR39B YPL038W-AQ3E7B4 63 aa-2.03□□□□□ -2.73
snR39BsnR39B Q0017Q9ZZX8 53 aa-2.03□□□□□ -2.73
snR39BsnR39B RPL14AP36105 138 aaKnown RBP-2.04□□□□□ -2.74
snR39BsnR39B YBR292CP38357 123 aa-2.04□□□□□ -2.74
snR39BsnR39B YGR042WP53227 271 aa-2.04□□□□□ -2.74
snR39BsnR39B MRX7P53869 86 aa-2.04□□□□□ -2.74
snR39BsnR39B ICY1Q04329 127 aa-2.04□□□□□ -2.74
snR39BsnR39B YDR119W-AQ2V2P9 66 aa-2.04□□□□□ -2.74
snR39BsnR39B YLR363W-AQ3E747 85 aa-2.04□□□□□ -2.74
snR39BsnR39B YRF1-1P0CX20 1796 aa-2.05□□□□□ -2.74
snR39BsnR39B YRF1-5P0CX21 1796 aa-2.05□□□□□ -2.74
snR39BsnR39B YRF1-8P0CX22 1796 aa-2.05□□□□□ -2.74
snR39BsnR39B PAU20Q08322 120 aa-2.05□□□□□ -2.74
snR39BsnR39B RTR2Q12378 196 aa-2.05□□□□□ -2.74
snR39BsnR39B SLO1Q3E784 85 aa-2.05□□□□□ -2.74
snR39BsnR39B Q0032Q9ZZX7 96 aa-2.05□□□□□ -2.74
snR39BsnR39B TY1B-BRQ12193 1756 aa-2.05□□□□□ -2.74
snR39BsnR39B APS2Q00381 147 aa-2.06□□□□□ -2.74
snR39BsnR39B YMR320WQ04897 101 aa-2.06□□□□□ -2.74
snR39BsnR39B COA2Q3E823 68 aa-2.06□□□□□ -2.74
snR39BsnR39B AME1P38313 324 aa-2.07□□□□□ -2.74
snR39BsnR39B RPL14BP38754 138 aaKnown RBP-2.07□□□□□ -2.74
snR39BsnR39B COX12Q01519 83 aa-2.07□□□□□ -2.74
snR39BsnR39B YDR210WQ03482 75 aa-2.07□□□□□ -2.74
snR39BsnR39B GPI19Q04082 140 aa-2.07□□□□□ -2.74
snR39BsnR39B CNL1Q06333 122 aa-2.07□□□□□ -2.74
snR39BsnR39B YIR021W-AQ3E739 70 aa-2.07□□□□□ -2.74
snR39BsnR39B PCC1Q3E833 88 aa-2.07□□□□□ -2.74
snR39BsnR39B TOM6P33448 61 aa-2.08□□□□□ -2.74
snR39BsnR39B TVP18Q04767 167 aa-2.08□□□□□ -2.74
snR39BsnR39B YLR361C-AQ3E795 98 aa-2.08□□□□□ -2.74
snR39BsnR39B ACP1P32463 125 aa-2.09□□□□□ -2.74
snR39BsnR39B YHR130CP38834 111 aa-2.09□□□□□ -2.74
snR39BsnR39B ELC1Q03071 99 aa-2.09□□□□□ -2.74
snR39BsnR39B GRX3Q03835 250 aa-2.09□□□□□ -2.74
snR39BsnR39B LSM6Q06406 86 aaKnown RBP-2.09□□□□□ -2.74
snR39BsnR39B YOL118CQ08259 102 aa-2.09□□□□□ -2.74
snR39BsnR39B YDR524C-BQ3E6R4 66 aa-2.09□□□□□ -2.74
snR39BsnR39B TY1B-ER2Q03619 1755 aa-2.09□□□□□ -2.74
snR39BsnR39B TY1B-MR1Q04214 1755 aa-2.09□□□□□ -2.74
snR39BsnR39B TY1B-LR1Q12088 1755 aaKnown RBP-2.09□□□□□ -2.74
snR39BsnR39B TY1B-NL1Q12112 1755 aa-2.09□□□□□ -2.74
snR39BsnR39B TY1B-GR3Q12316 1755 aa-2.09□□□□□ -2.74
snR39BsnR39B PAU24P38155 120 aa-2.1□□□□□ -2.75
snR39BsnR39B YDR366CP87287 132 aa-2.1□□□□□ -2.75
snR39BsnR39B YBR201C-AQ2V2Q3 67 aa-2.1□□□□□ -2.75
snR39BsnR39B OST5Q92316 86 aa-2.1□□□□□ -2.75
snR39BsnR39B YBR032WP38223 100 aa-2.11□□□□□ -2.75
snR39BsnR39B BSC4P53841 131 aa-2.11□□□□□ -2.75
snR39BsnR39B RPL22BP56628 122 aaKnown RBP-2.11□□□□□ -2.75
snR39BsnR39B SPC3Q12133 184 aa-2.11□□□□□ -2.75
snR39BsnR39B YPR108W-AQ3E7B3 70 aa-2.11□□□□□ -2.75
snR39BsnR39B YNL042W-BQ3E7Z2 85 aa-2.11□□□□□ -2.75
snR39BsnR39B ECM29P38737 1868 aa-2.11□□□□□ -2.75
snR39BsnR39B YIR020CP40575 100 aa-2.12□□□□□ -2.75
snR39BsnR39B GTT1P40582 234 aa-2.12□□□□□ -2.75
snR39BsnR39B YOR192C-CQ3E736 78 aa-2.12□□□□□ -2.75
snR39BsnR39B YOR376W-AQ3E805 51 aa-2.12□□□□□ -2.75
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms