RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	UTR5	P32630	166 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	CLB6	P32943	380 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YHL018W	P38744	120 aa	Predicted RBP	1.06	□□□□□ -2.24
SKI3	YPR189W	YIL086C	P40503	102 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	KNH1	P50112	268 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	POP3	P53833	195 aa	Predicted RBP	1.06	□□□□□ -2.24
SKI3	YPR189W	DAD4	P69851	72 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	RCE1	Q03530	315 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	SOM1	Q05676	74 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	RTR2	Q12378	196 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YBR090C	P38253	122 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YAE1	P47118	141 aa	Predicted RBP	1.06	□□□□□ -2.24
SKI3	YPR189W	YPR096C	O13587	100 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	COX8	P04039	78 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	FMT1	P32785	401 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	CCS1	P40202	249 aa	Known RBP	1.06	□□□□□ -2.24
SKI3	YPR189W	ATP19	P81451	68 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YML079W	Q03629	201 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	COA4	Q05809	96 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	UBC5	P15732	148 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	FYV5	P25585	152 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YKL044W	P36092	106 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	QCR10	P37299	77 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	SVP26	P38869	228 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YGR269W	P40326	108 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	MIX17	Q03667	156 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YMR103C	Q04436	120 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	FIT2	Q08906	153 aa		1.06	□□□□□ -2.24
SKI3	YPR189W	YGL041W-A	P0C5N3	154 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	SNF11	P38956	169 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	GNA1	P43577	159 aa	Predicted RBP	1.05	□□□□□ -2.24
SKI3	YPR189W	YMR082C	Q04276	118 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	RPL13A	Q12690	199 aa	Predicted RBP	1.05	□□□□□ -2.24
SKI3	YPR189W	MED11	Q99278	115 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	YCR099C	P25657	155 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	KEI1	Q06346	221 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	HAP3	P13434	144 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	SIP18	P50263	79 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	CYT2	Q00873	224 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	ELP6	Q04868	273 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	NMA1	Q06178	401 aa	Known RBP	1.05	□□□□□ -2.24
SKI3	YPR189W	PRM7	Q12459	698 aa		1.05	□□□□□ -2.24
SKI3	YPR189W	SEC59	P20048	519 aa		1.04	□□□□□ -2.24
SKI3	YPR189W	YHR022C	P38763	256 aa		1.04	□□□□□ -2.24
SKI3	YPR189W	YEA6	P39953	335 aa		1.04	□□□□□ -2.24
SKI3	YPR189W	EMC5	P40540	141 aa		1.04	□□□□□ -2.24
SKI3	YPR189W	MPC1	P53157	130 aa	Known RBP	1.04	□□□□□ -2.24
SKI3	YPR189W	ERV14	P53173	138 aa		1.04	□□□□□ -2.24
SKI3	YPR189W	HPA3	P39979	161 aa		1.04	□□□□□ -2.24
SKI3	YPR189W	EMP24	P32803	203 aa	Known RBP	1.03	□□□□□ -2.24
SKI3	YPR189W	AIM18	P38884	321 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	TDA2	P40045	126 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	VPS55	P47111	140 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	YGR164W	P53291	111 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	GPI19	Q04082	140 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	YDL157C	Q12082	118 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	EMC6	Q12431	108 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	YKR045C	P36138	183 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	YJL144W	P47009	104 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	YGL041C-B	Q3E750	60 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	RPB7	P34087	171 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	ERI1	P62651	68 aa	Known RBP	1.03	□□□□□ -2.24
SKI3	YPR189W	YKL068W-A	Q3E826	78 aa		1.03	□□□□□ -2.24
SKI3	YPR189W	MRPL44	P19956	98 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	AVO2	Q04749	426 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	YPR153W	Q06537	140 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	SCP1	Q08873	200 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	YOR192C-C	Q3E736	78 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	YMR030W-A	Q3E760	96 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	YLR365W	Q7LIF2	110 aa		1.03	□□□□□ -2.25
SKI3	YPR189W	RPS25B	P0C0T4	108 aa	Known RBP	1.02	□□□□□ -2.25
SKI3	YPR189W	PAU21	P0CE86	164 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	PAU22	P0CE87	164 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	YHR130C	P38834	111 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	DCV1	P43595	202 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	RPS25A	Q3E792	108 aa	Predicted RBP	1.02	□□□□□ -2.25
SKI3	YPR189W	HSP150	P32478	413 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	HSP10	P38910	106 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	YGL149W	P53116	101 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	MET31	Q03081	177 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	MIC10	Q96VH5	97 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	FUN14	P18411	198 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	IPT1	P38954	527 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	YEL014C	P39999	101 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	YFL051C	P43552	160 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	BRP1	P53194	125 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	PAU12	P53343	120 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	NAT5	Q08689	176 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	YGL194C-A	Q2V2P6	80 aa		1.02	□□□□□ -2.25
SKI3	YPR189W	YMR090W	Q04304	227 aa	Known RBP	1.01	□□□□□ -2.25
SKI3	YPR189W	HOR7	Q05827	59 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	YHR007C-A	Q07074	71 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	YMR175W-A	Q3E766	64 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	KSH1	Q8TGJ3	72 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	YBR242W	P38331	238 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	HYR1	P40581	163 aa	Known RBP	1.01	□□□□□ -2.25
SKI3	YPR189W	GPI11	Q06636	219 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	RTC6	O14464	93 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	COX7	P10174	60 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	UBC4	P15731	148 aa		1.01	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms