RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeastyeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB4YOL112W YOR008C-AQ3E7B9 74 aa6.64□□□□□ -1.35
MSB4YOL112W YER085CP40058 173 aa6.63□□□□□ -1.35
MSB4YOL112W MED7Q08278 222 aa6.63□□□□□ -1.35
MSB4YOL112W TRP1P00912 224 aa6.62□□□□□ -1.35
MSB4YOL112W HMRA2P0CY13 119 aa6.62□□□□□ -1.35
MSB4YOL112W YEL008WP40001 126 aa6.62□□□□□ -1.35
MSB4YOL112W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
MSB4YOL112W YPR010C-AA5Z2X5 72 aa6.6□□□□□ -1.35
MSB4YOL112W ANB1P19211 157 aa6.6□□□□□ -1.35
MSB4YOL112W GAT4P40569 121 aa6.6□□□□□ -1.35
MSB4YOL112W ERV14P53173 138 aa6.6□□□□□ -1.35
MSB4YOL112W POP3P53833 195 aaPredicted RBP6.6□□□□□ -1.35
MSB4YOL112W YDR042CQ03205 200 aa6.6□□□□□ -1.35
MSB4YOL112W COA3Q3E7B2 85 aa6.6□□□□□ -1.35
MSB4YOL112W YBR219CP38317 127 aa6.6□□□□□ -1.35
MSB4YOL112W URM1P40554 99 aaPredicted RBP6.6□□□□□ -1.35
MSB4YOL112W PKR1Q03880 122 aaKnown RBP6.6□□□□□ -1.35
MSB4YOL112W YLR112WQ12130 139 aa6.6□□□□□ -1.35
MSB4YOL112W ERG28P40030 148 aa6.59□□□□□ -1.36
MSB4YOL112W SEN15Q04675 128 aa6.59□□□□□ -1.36
MSB4YOL112W TPT1Q12272 230 aaKnown RBP6.59□□□□□ -1.36
MSB4YOL112W YCL021W-AQ96VH3 125 aa6.59□□□□□ -1.36
MSB4YOL112W SSS1P35179 80 aa6.58□□□□□ -1.36
MSB4YOL112W OST3P48439 350 aa6.57□□□□□ -1.36
MSB4YOL112W CUE4Q04201 117 aaPredicted RBP6.57□□□□□ -1.36
MSB4YOL112W HTL1Q9URQ5 78 aa6.56□□□□□ -1.36
MSB4YOL112W YBL081WP38180 368 aaKnown RBP6.55□□□□□ -1.36
MSB4YOL112W FYV4P38783 130 aaPredicted RBP6.55□□□□□ -1.36
MSB4YOL112W YAR023CD6VPM8 179 aa6.54□□□□□ -1.36
MSB4YOL112W RPL27BP0C2H7 136 aaKnown RBP6.54□□□□□ -1.36
MSB4YOL112W YMR103CQ04436 120 aa6.54□□□□□ -1.36
MSB4YOL112W LCL2Q08045 131 aa6.54□□□□□ -1.36
MSB4YOL112W ATP15P21306 62 aa6.53□□□□□ -1.36
MSB4YOL112W YAL064WP39711 94 aa6.53□□□□□ -1.36
MSB4YOL112W ATP16Q12165 160 aa6.53□□□□□ -1.36
MSB4YOL112W RPL31AP0C2H8 113 aaKnown RBP6.53□□□□□ -1.36
MSB4YOL112W YMR295CQ03559 197 aa6.53□□□□□ -1.36
MSB4YOL112W BET5Q03630 159 aa6.53□□□□□ -1.36
MSB4YOL112W YIL134C-AQ45U18 67 aa6.53□□□□□ -1.36
MSB4YOL112W ENV10Q99382 181 aa6.53□□□□□ -1.36
MSB4YOL112W RPC10P40422 70 aa6.52□□□□□ -1.37
MSB4YOL112W YKL070WP36087 169 aa6.51□□□□□ -1.37
MSB4YOL112W YPL229WQ99395 206 aa6.51□□□□□ -1.37
MSB4YOL112W MRPL11P36521 249 aaPredicted RBP6.5□□□□□ -1.37
MSB4YOL112W GIS2P53849 153 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37 RIP-Chip
MSB4YOL112W APS1P35181 156 aa6.49□□□□□ -1.37
MSB4YOL112W PAU16P35994 123 aa6.49□□□□□ -1.37
MSB4YOL112W YAR029WP39549 74 aa6.49□□□□□ -1.37
MSB4YOL112W NUP42P49686 430 aaKnown RBP6.49□□□□□ -1.37
MSB4YOL112W YLR194CQ05777 254 aa6.49□□□□□ -1.37
MSB4YOL112W CMC2Q3E7A4 109 aa6.49□□□□□ -1.37
MSB4YOL112W MRP10O75012 95 aa6.48□□□□□ -1.37
MSB4YOL112W YDR034C-AP0C289 58 aa6.48□□□□□ -1.37
MSB4YOL112W ISU2Q12056 156 aa6.48□□□□□ -1.37
MSB4YOL112W SCS22Q6Q595 175 aa6.48□□□□□ -1.37
MSB4YOL112W YDL022C-AP0C5L6 82 aa6.47□□□□□ -1.37
MSB4YOL112W DFM1Q12743 341 aaKnown RBP6.47□□□□□ -1.37
MSB4YOL112W AIM11P87275 137 aa6.47□□□□□ -1.37
MSB4YOL112W YMR175W-AQ3E766 64 aa6.47□□□□□ -1.37
MSB4YOL112W CIN5P40917 295 aa6.46□□□□□ -1.38
MSB4YOL112W YAL065CO13511 128 aa6.45□□□□□ -1.38
MSB4YOL112W CNL1Q06333 122 aa6.45□□□□□ -1.38
MSB4YOL112W SNA2P56508 79 aa6.44□□□□□ -1.38
MSB4YOL112W YLR050CQ12155 161 aaKnown RBP6.44□□□□□ -1.38
MSB4YOL112W SMP1P38128 452 aa6.43□□□□□ -1.38
MSB4YOL112W SHU1P38751 150 aa6.43□□□□□ -1.38
MSB4YOL112W YPL261CQ08976 102 aa6.43□□□□□ -1.38
MSB4YOL112W YDR029WQ12111 104 aa6.43□□□□□ -1.38
MSB4YOL112W COA6Q3E846 104 aa6.43□□□□□ -1.38
MSB4YOL112W SEC11P15367 167 aa6.42□□□□□ -1.38
MSB4YOL112W COX14P39103 70 aa6.41□□□□□ -1.38
MSB4YOL112W HAC1P41546 238 aa6.41□□□□□ -1.38
MSB4YOL112W RPL18AP0CX49 186 aaKnown RBP6.41□□□□□ -1.38
MSB4YOL112W RPL18BP0CX50 186 aaKnown RBP6.41□□□□□ -1.38
MSB4YOL112W YKR041WP36134 250 aa6.4□□□□□ -1.39
MSB4YOL112W RPL32P38061 130 aaKnown RBP6.4□□□□□ -1.39
MSB4YOL112W YEL067CP39978 195 aa6.4□□□□□ -1.39
MSB4YOL112W VTC1P40046 129 aaRIP-Chip data6.4□□□□□ -1.39not detected
MSB4YOL112W MRPL44P19956 98 aa6.38□□□□□ -1.39
MSB4YOL112W TOA2P32774 122 aa6.38□□□□□ -1.39
MSB4YOL112W PEX17P40155 199 aa6.38□□□□□ -1.39
MSB4YOL112W YGL230CP53074 147 aa6.38□□□□□ -1.39
MSB4YOL112W MRPS12P53732 153 aa6.37□□□□□ -1.39
MSB4YOL112W YDL241WQ07738 123 aa6.37□□□□□ -1.39
MSB4YOL112W MSL1P40567 111 aaPredicted RBP6.36□□□□□ -1.39
MSB4YOL112W PPT2Q12036 173 aa6.36□□□□□ -1.39
MSB4YOL112W RPL28P02406 149 aaKnown RBP6.35□□□□□ -1.39
MSB4YOL112W YKL044WP36092 106 aa6.35□□□□□ -1.39
MSB4YOL112W PEX22P39718 180 aa6.35□□□□□ -1.39
MSB4YOL112W YDL157CQ12082 118 aa6.35□□□□□ -1.39
MSB4YOL112W ADH1P00330 348 aaKnown RBP6.34□□□□□ -1.39
MSB4YOL112W AQY2P0CD90 149 aa6.34□□□□□ -1.4
MSB4YOL112W YPL073CP40323 161 aa6.34□□□□□ -1.4
MSB4YOL112W YNR077CP53758 84 aa6.34□□□□□ -1.4
MSB4YOL112W YLR307C-AQ3E825 87 aa6.34□□□□□ -1.4
MSB4YOL112W YNL190WP53872 204 aa6.33□□□□□ -1.4
MSB4YOL112W QCR8P08525 94 aa6.32□□□□□ -1.4
MSB4YOL112W OXA1P39952 402 aa6.32□□□□□ -1.4
MSB4YOL112W SMD1Q02260 146 aaPredicted RBP6.32□□□□□ -1.4
MSB4YOL112W NAT5Q08689 176 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms