RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C RPL22AP05749 121 aaKnown RBP2.05□□□□□ -2.08
HRD1YOL013C FUN14P18411 198 aa2.05□□□□□ -2.08
HRD1YOL013C YHR130CP38834 111 aa2.05□□□□□ -2.08
HRD1YOL013C YLR365WQ7LIF2 110 aa2.05□□□□□ -2.08
HRD1YOL013C FLO9P39712 1322 aa2.04□□□□□ -2.08
HRD1YOL013C RPB7P34087 171 aa2.04□□□□□ -2.08
HRD1YOL013C MRPL15P36523 253 aa2.04□□□□□ -2.08
HRD1YOL013C ECM31P38122 312 aa2.04□□□□□ -2.08
HRD1YOL013C DSE2P38844 325 aa2.04□□□□□ -2.08
HRD1YOL013C PAU12P53343 120 aa2.04□□□□□ -2.08
HRD1YOL013C HRT1Q08273 121 aa2.04□□□□□ -2.08
HRD1YOL013C PRM7Q12459 698 aa2.04□□□□□ -2.08
HRD1YOL013C YCR075W-AQ3E830 75 aa2.04□□□□□ -2.08
HRD1YOL013C MIC10Q96VH5 97 aa2.04□□□□□ -2.08
HRD1YOL013C YGL149WP53116 101 aa2.03□□□□□ -2.08
HRD1YOL013C YER187WP40102 141 aa2.02□□□□□ -2.09
HRD1YOL013C GPI11Q06636 219 aa2.02□□□□□ -2.09
HRD1YOL013C YHR007C-AQ07074 71 aa2.02□□□□□ -2.09
HRD1YOL013C NAT5Q08689 176 aa2.02□□□□□ -2.09
HRD1YOL013C UBC4P15731 148 aa2.02□□□□□ -2.09
HRD1YOL013C HSP10P38910 106 aa2.02□□□□□ -2.09
HRD1YOL013C SMX2P40204 77 aaKnown RBP2.02□□□□□ -2.09
HRD1YOL013C YPL067CQ02754 198 aa2.02□□□□□ -2.09
HRD1YOL013C SCP1Q08873 200 aa2.02□□□□□ -2.09
HRD1YOL013C YDR524C-BQ3E6R4 66 aa2.02□□□□□ -2.09
HRD1YOL013C KSH1Q8TGJ3 72 aa2.02□□□□□ -2.09
HRD1YOL013C TAR1Q8TGM6 124 aa2.02□□□□□ -2.09
HRD1YOL013C YPR096CO13587 100 aa2.01□□□□□ -2.09
HRD1YOL013C PAU2P32612 120 aa2.01□□□□□ -2.09
HRD1YOL013C YEL008WP40001 126 aa2.01□□□□□ -2.09
HRD1YOL013C IGO1P53897 168 aa2.01□□□□□ -2.09
HRD1YOL013C MET31Q03081 177 aa2.01□□□□□ -2.09
HRD1YOL013C YMR090WQ04304 227 aaKnown RBP2.01□□□□□ -2.09
HRD1YOL013C YGL194C-AQ2V2P6 80 aa2.01□□□□□ -2.09
HRD1YOL013C YPL261CQ08976 102 aa2□□□□□ -2.09
HRD1YOL013C YHR086W-AQ3E746 53 aa2□□□□□ -2.09
HRD1YOL013C PEP8P40335 379 aa1.99□□□□□ -2.09
HRD1YOL013C YIL014C-AQ02598 104 aa1.99□□□□□ -2.09
HRD1YOL013C FIT1Q04433 528 aa1.99□□□□□ -2.09
HRD1YOL013C FAB1P34756 2278 aa1.99□□□□□ -2.09
HRD1YOL013C PAU24P38155 120 aa1.99□□□□□ -2.09
HRD1YOL013C YBR032WP38223 100 aa1.99□□□□□ -2.09
HRD1YOL013C YIR020CP40575 100 aa1.99□□□□□ -2.09
HRD1YOL013C YJL197C-AP0C5P0 93 aa1.98□□□□□ -2.09
HRD1YOL013C GTT1P40582 234 aa1.98□□□□□ -2.09
HRD1YOL013C YLR194CQ05777 254 aa1.98□□□□□ -2.09
HRD1YOL013C YOS1Q3E834 85 aa1.98□□□□□ -2.09
HRD1YOL013C OST5Q92316 86 aa1.98□□□□□ -2.09
HRD1YOL013C YBR219CP38317 127 aa1.97□□□□□ -2.09
HRD1YOL013C HUR1P45820 110 aa1.97□□□□□ -2.09
HRD1YOL013C YLR296WQ05898 108 aa1.97□□□□□ -2.09
HRD1YOL013C YLR162WQ06235 118 aa1.97□□□□□ -2.09
HRD1YOL013C STT4P37297 1900 aa1.97□□□□□ -2.09
HRD1YOL013C QCR8P08525 94 aa1.96□□□□□ -2.1
HRD1YOL013C MRPL11P36521 249 aaPredicted RBP1.96□□□□□ -2.1
HRD1YOL013C YBR242WP38331 238 aa1.96□□□□□ -2.1
HRD1YOL013C RGM1Q00453 211 aa1.96□□□□□ -2.1
HRD1YOL013C SWC7Q06707 132 aa1.96□□□□□ -2.1
HRD1YOL013C YGL010WP25338 174 aa1.96□□□□□ -2.1
HRD1YOL013C YCL042WP25572 119 aa1.96□□□□□ -2.1
HRD1YOL013C NHP10Q03435 203 aa1.96□□□□□ -2.1
HRD1YOL013C DAD1Q12248 94 aa1.96□□□□□ -2.1
HRD1YOL013C COX23P38824 151 aa1.95□□□□□ -2.1
HRD1YOL013C SNU13P39990 126 aaKnown RBP1.95□□□□□ -2.1
HRD1YOL013C FIT3Q08907 204 aa1.95□□□□□ -2.1
HRD1YOL013C RRT15Q3E811 62 aa1.95□□□□□ -2.1
HRD1YOL013C PCC1Q3E833 88 aa1.95□□□□□ -2.1
HRD1YOL013C MHF1Q3E835 90 aa1.95□□□□□ -2.1
HRD1YOL013C YGL014C-AP0C5N1 53 aa1.94□□□□□ -2.1
HRD1YOL013C PAU19P0CE85 124 aa1.94□□□□□ -2.1
HRD1YOL013C YHR213WP0CI67 198 aa1.94□□□□□ -2.1
HRD1YOL013C PRE1P22141 198 aaKnown RBP1.94□□□□□ -2.1
HRD1YOL013C PAU3P25610 124 aa1.94□□□□□ -2.1
HRD1YOL013C NRG2P38082 220 aa1.94□□□□□ -2.1
HRD1YOL013C AIM4P38305 123 aaPredicted RBP1.94□□□□□ -2.1
HRD1YOL013C YDR034W-BQ6Q5X2 51 aa1.94□□□□□ -2.1
HRD1YOL013C PDX3P38075 228 aaKnown RBP1.93□□□□□ -2.1
HRD1YOL013C YBR027CP38220 110 aa1.93□□□□□ -2.1
HRD1YOL013C RPL36BO14455 100 aaKnown RBP1.93□□□□□ -2.1
HRD1YOL013C RPL36AP05745 100 aaPredicted RBP1.93□□□□□ -2.1
HRD1YOL013C ATG8P38182 117 aaRIP-Chip data1.93□□□□□ -2.1not detected
HRD1YOL013C LST8P41318 303 aa1.93□□□□□ -2.1
HRD1YOL013C RSM19P53733 91 aaPredicted RBP1.93□□□□□ -2.1
HRD1YOL013C RPL22BP56628 122 aaKnown RBP1.93□□□□□ -2.1
HRD1YOL013C SED1Q01589 338 aa1.93□□□□□ -2.1
HRD1YOL013C MIX14Q04341 121 aa1.93□□□□□ -2.1
HRD1YOL013C SEN15Q04675 128 aa1.93□□□□□ -2.1
HRD1YOL013C YDR029WQ12111 104 aa1.93□□□□□ -2.1
HRD1YOL013C SRX1P36077 127 aa1.92□□□□□ -2.1
HRD1YOL013C SNN1P48232 102 aa1.92□□□□□ -2.1
HRD1YOL013C YMR082CQ04276 118 aa1.92□□□□□ -2.1
HRD1YOL013C YKL018C-AQ3E7A7 99 aa1.92□□□□□ -2.1
HRD1YOL013C COA3Q3E7B2 85 aa1.92□□□□□ -2.1
HRD1YOL013C COA6Q3E846 104 aa1.92□□□□□ -2.1
HRD1YOL013C PAU16P35994 123 aa1.91□□□□□ -2.1
HRD1YOL013C EMC5P40540 141 aa1.91□□□□□ -2.1
HRD1YOL013C PAU15P40585 124 aa1.91□□□□□ -2.1
HRD1YOL013C VAM10Q08474 114 aa1.91□□□□□ -2.1
HRD1YOL013C PRM3Q08931 133 aa1.91□□□□□ -2.1
HRD1YOL013C YNL146C-AQ3E7Z1 64 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms