RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	ICS3	P47034	131 aa		5.68	□□□□□ -1.5
MSB3	YNL293W	YMR295C	Q03559	197 aa		5.68	□□□□□ -1.5
MSB3	YNL293W	API2	Q04413	109 aa		5.68	□□□□□ -1.5
MSB3	YNL293W	NCA3	P46955	337 aa		5.67	□□□□□ -1.5
MSB3	YNL293W	YGL034C	P53186	121 aa		5.67	□□□□□ -1.5
MSB3	YNL293W	YMR181C	Q03231	154 aa		5.67	□□□□□ -1.5
MSB3	YNL293W	RPC11	Q04307	110 aa	Predicted RBP	5.67	□□□□□ -1.5
MSB3	YNL293W	YHR214C-D	P0CX93	97 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	YBR144C	P34215	104 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	YKR045C	P36138	183 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	CTR2	P38865	189 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	YFR035C	P43608	114 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	YKR032W	P36127	104 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	RSM18	P40033	138 aa		5.66	□□□□□ -1.5
MSB3	YNL293W	RPS14A	P06367	137 aa	Known RBP	5.65	□□□□□ -1.51
MSB3	YNL293W	SPS100	P13130	326 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	HSP12	P22943	109 aa	Known RBP	5.65	□□□□□ -1.51
MSB3	YNL293W	RPB9	P27999	122 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	MTC6	P38849	526 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	YNL208W	P40159	199 aa	Known RBP	5.65	□□□□□ -1.51
MSB3	YNL293W	HNT2	P49775	206 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	TOS8	P53147	276 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	TOM7	P53507	60 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	YML122C	Q03207	126 aa		5.65	□□□□□ -1.51
MSB3	YNL293W	YOR192C-C	Q3E736	78 aa		5.64	□□□□□ -1.51
MSB3	YNL293W	TSC3	Q3E790	80 aa		5.64	□□□□□ -1.51
MSB3	YNL293W	AIM4	P38305	123 aa	Predicted RBP	5.64	□□□□□ -1.51
MSB3	YNL293W	MPC2	P38857	129 aa		5.64	□□□□□ -1.51
MSB3	YNL293W	SPI1	P40092	148 aa		5.64	□□□□□ -1.51
MSB3	YNL293W	YDR274C	P87283	123 aa		5.64	□□□□□ -1.51
MSB3	YNL293W	YLR012C	Q07927	99 aa		5.63	□□□□□ -1.51
MSB3	YNL293W	FIT2	Q08906	153 aa		5.63	□□□□□ -1.51
MSB3	YNL293W	MGR2	Q02889	113 aa		5.62	□□□□□ -1.51
MSB3	YNL293W	ISF1	P32488	338 aa		5.62	□□□□□ -1.51
MSB3	YNL293W	ERI1	P62651	68 aa	Known RBP	5.62	□□□□□ -1.51
MSB3	YNL293W	YLR194C	Q05777	254 aa		5.62	□□□□□ -1.51
MSB3	YNL293W	YDL009C	Q12210	107 aa		5.62	□□□□□ -1.51
MSB3	YNL293W	RPL26A	P05743	127 aa	Known RBP	5.61	□□□□□ -1.51
MSB3	YNL293W	HMRA2	P0CY13	119 aa		5.61	□□□□□ -1.51
MSB3	YNL293W	YHR022C	P38763	256 aa		5.61	□□□□□ -1.51
MSB3	YNL293W	YOL118C	Q08259	102 aa		5.61	□□□□□ -1.51
MSB3	YNL293W	YOL160W	Q08321	113 aa		5.61	□□□□□ -1.51
MSB3	YNL293W	LDB16	P25587	256 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	TDA2	P40045	126 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	DCV1	P43595	202 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	ECO1	P43605	281 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	YGL193C	P53097	103 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	YLR285C-A	Q3E771	56 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	COA3	Q3E7B2	85 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	YML100W-A	Q8TGT0	57 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	YAL065C	O13511	128 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	SUT1	P53032	299 aa	Known RBP	5.6	□□□□□ -1.51
MSB3	YNL293W	AIR2	Q12476	344 aa	Known RBP	5.6	□□□□□ -1.51
MSB3	YNL293W	YOR381W-A	Q3E804	55 aa		5.6	□□□□□ -1.51
MSB3	YNL293W	HHF1	P02309	103 aa	Known RBP	5.59	□□□□□ -1.51
MSB3	YNL293W	YHP1	Q04116	353 aa		5.59	□□□□□ -1.51
MSB3	YNL293W	YEL045C	P32616	141 aa		5.58	□□□□□ -1.52
MSB3	YNL293W	MIG3	P39943	394 aa		5.58	□□□□□ -1.52
MSB3	YNL293W	HUR1	P45820	110 aa		5.58	□□□□□ -1.52
MSB3	YNL293W	AGA1	P32323	725 aa		5.58	□□□□□ -1.52
MSB3	YNL293W	YOR314W	Q12506	109 aa		5.58	□□□□□ -1.52
MSB3	YNL293W	CYR1	P08678	2026 aa	Known RBP	5.58	□□□□□ -1.52
MSB3	YNL293W	ARF2	P19146	181 aa	Known RBP	5.57	□□□□□ -1.52
MSB3	YNL293W	RPB10	P22139	70 aa		5.57	□□□□□ -1.52
MSB3	YNL293W	MSA2	P36157	363 aa		5.57	□□□□□ -1.52
MSB3	YNL293W	IMP2	P46972	177 aa		5.57	□□□□□ -1.52
MSB3	YNL293W	PCP1	P53259	346 aa		5.57	□□□□□ -1.52
MSB3	YNL293W	ATP20	Q12233	115 aa		5.57	□□□□□ -1.52
MSB3	YNL293W	YOR343C	Q12484	108 aa		5.57	□□□□□ -1.52
MSB3	YNL293W	SAP30	P38429	201 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	VPS68	Q12016	184 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	RPL15A	P05748	204 aa	Known RBP	5.56	□□□□□ -1.52
MSB3	YNL293W	YLR156W	P0CE96	114 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	YLR159W	P0CE97	114 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	YLR161W	P0CE98	114 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	YGL088W	P53151	121 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	RPL15B	P54780	204 aa	Predicted RBP	5.56	□□□□□ -1.52
MSB3	YNL293W	DAD4	P69851	72 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	YLR162W	Q06235	118 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	CRC1	Q12289	327 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	YGR121W-A	Q3E816	71 aa		5.56	□□□□□ -1.52
MSB3	YNL293W	CDC39	P25655	2108 aa	Known RBP	5.55	□□□□□ -1.52
MSB3	YNL293W	MDM35	O60200	86 aa		5.55	□□□□□ -1.52
MSB3	YNL293W	TOS6	P48560	102 aa		5.55	□□□□□ -1.52
MSB3	YNL293W	YMR321C	Q04898	105 aa		5.54	□□□□□ -1.52
MSB3	YNL293W	RPS14B	P39516	138 aa	Known RBP	5.54	□□□□□ -1.52
MSB3	YNL293W	YAL064W	P39711	94 aa		5.54	□□□□□ -1.52
MSB3	YNL293W	NCE102	Q12207	173 aa	RIP-Chip data	5.54	□□□□□ -1.52	not detected
MSB3	YNL293W	ARF1	P11076	181 aa	Known RBP	5.53	□□□□□ -1.52
MSB3	YNL293W	YHL005C	P38752	130 aa		5.53	□□□□□ -1.52
MSB3	YNL293W	PRM7	Q12459	698 aa		5.53	□□□□□ -1.52
MSB3	YNL293W	YDR461C-A	Q2V2P7	80 aa		5.53	□□□□□ -1.52
MSB3	YNL293W	YGL258W-A	Q3E740	77 aa		5.53	□□□□□ -1.52
MSB3	YNL293W	YMR141C	P40211	102 aa		5.52	□□□□□ -1.53
MSB3	YNL293W	SPG1	P50088	95 aa		5.52	□□□□□ -1.53
MSB3	YNL293W	YNL190W	P53872	204 aa		5.52	□□□□□ -1.53
MSB3	YNL293W	YHR214C-E	Q8TGK0	99 aa		5.52	□□□□□ -1.53
MSB3	YNL293W	EDC1	P53080	175 aa	Predicted RBP	5.52	□□□□□ -1.53
MSB3	YNL293W	RPL26B	P53221	127 aa	Known RBP	5.52	□□□□□ -1.53
MSB3	YNL293W	RNH203	Q12338	110 aa		5.5	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms