RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	SMP1	P38128	452 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	RRT1	P38192	103 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NRD1	YNL251C	PIR5	P46999	287 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	AIM34	Q03673	198 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	GLO1	P50107	326 aa		4.17	□□□□□ -1.74
NRD1	YNL251C	YOR008C-A	Q3E7B9	74 aa		4.17	□□□□□ -1.74
NRD1	YNL251C	YKR045C	P36138	183 aa		4.16	□□□□□ -1.74
NRD1	YNL251C	GLE2	P40066	365 aa		4.16	□□□□□ -1.74
NRD1	YNL251C	PRM7	Q12459	698 aa		4.16	□□□□□ -1.74
NRD1	YNL251C	YDR381C-A	Q3E6R5	114 aa		4.16	□□□□□ -1.74
NRD1	YNL251C	YPL038W-A	Q3E7B4	63 aa		4.16	□□□□□ -1.74
NRD1	YNL251C	FAB1	P34756	2278 aa		4.16	□□□□□ -1.74
NRD1	YNL251C	YBR121C-A	P0C5L4	52 aa		4.15	□□□□□ -1.74
NRD1	YNL251C	PBI2	P0CT04	75 aa	Known RBP	4.15	□□□□□ -1.74
NRD1	YNL251C	INO2	P26798	304 aa		4.15	□□□□□ -1.74
NRD1	YNL251C	TOM6	P33448	61 aa		4.15	□□□□□ -1.74
NRD1	YNL251C	CCW14	O13547	238 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	RPS28B	P0C0X0	67 aa	Known RBP	4.15	□□□□□ -1.75
NRD1	YNL251C	LDB16	P25587	256 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	AIM19	P40502	157 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	URM1	P40554	99 aa	Predicted RBP	4.15	□□□□□ -1.75
NRD1	YNL251C	SIP18	P50263	79 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	YDR209C	Q03480	137 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	SHH4	Q06236	168 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	IRC23	Q08416	157 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	RNH203	Q12338	110 aa		4.15	□□□□□ -1.75
NRD1	YNL251C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.15	□□□□□ -1.75
NRD1	YNL251C	ATP15	P21306	62 aa		4.14	□□□□□ -1.75
NRD1	YNL251C	YOR029W	Q12243	111 aa		4.14	□□□□□ -1.75
NRD1	YNL251C	YMR105W-A	Q8TGS8	64 aa		4.14	□□□□□ -1.75
NRD1	YNL251C	RPL28	P02406	149 aa	Known RBP	4.13	□□□□□ -1.75
NRD1	YNL251C	YJL027C	P47063	138 aa	Predicted RBP	4.13	□□□□□ -1.75
NRD1	YNL251C	SBH1	P52870	82 aa		4.13	□□□□□ -1.75
NRD1	YNL251C	YNL190W	P53872	204 aa		4.13	□□□□□ -1.75
NRD1	YNL251C	PBA1	Q05778	276 aa		4.13	□□□□□ -1.75
NRD1	YNL251C	COX17	Q12287	69 aa		4.13	□□□□□ -1.75
NRD1	YNL251C	SEN1	Q00416	2231 aa	Known RBP	4.13	□□□□□ -1.75
NRD1	YNL251C	RPL2A	P0CX45	254 aa	Known RBP	4.12	□□□□□ -1.75
NRD1	YNL251C	RPL2B	P0CX46	254 aa	Known RBP	4.12	□□□□□ -1.75
NRD1	YNL251C	MRPS12	P53732	153 aa		4.12	□□□□□ -1.75
NRD1	YNL251C	RPL42A	P0CX27	106 aa	Known RBP	4.12	□□□□□ -1.75
NRD1	YNL251C	RPL42B	P0CX28	106 aa	Known RBP	4.12	□□□□□ -1.75
NRD1	YNL251C	RPL18A	P0CX49	186 aa	Known RBP	4.11	□□□□□ -1.75
NRD1	YNL251C	RPL18B	P0CX50	186 aa	Known RBP	4.11	□□□□□ -1.75
NRD1	YNL251C	YCR050C	P25630	102 aa		4.11	□□□□□ -1.75
NRD1	YNL251C	YOL160W	Q08321	113 aa		4.11	□□□□□ -1.75
NRD1	YNL251C	EMC6	Q12431	108 aa		4.11	□□□□□ -1.75
NRD1	YNL251C	YBR126W-A	Q8TGU7	68 aa		4.11	□□□□□ -1.75
NRD1	YNL251C	RPL39	P04650	51 aa		4.1	□□□□□ -1.75
NRD1	YNL251C	PEX17	P40155	199 aa		4.1	□□□□□ -1.75
NRD1	YNL251C	SIM1	P40472	476 aa		4.1	□□□□□ -1.75
NRD1	YNL251C	YHL018W	P38744	120 aa	Predicted RBP	4.09	□□□□□ -1.75
NRD1	YNL251C	MPC2	P38857	129 aa		4.09	□□□□□ -1.75
NRD1	YNL251C	DCV1	P43595	202 aa		4.09	□□□□□ -1.75
NRD1	YNL251C	YLR122C	Q12312	125 aa		4.09	□□□□□ -1.75
NRD1	YNL251C	KTI11	Q3E840	82 aa		4.09	□□□□□ -1.75
NRD1	YNL251C	MSA2	P36157	363 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	ADH5	P38113	351 aa	Known RBP	4.09	□□□□□ -1.76
NRD1	YNL251C	YSY6	P38374	65 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	ERG28	P40030	148 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	HUR1	P45820	110 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	YJR146W	P47174	117 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	UBC11	P52492	156 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	GAT3	Q07928	141 aa		4.09	□□□□□ -1.76
NRD1	YNL251C	TRP1	P00912	224 aa		4.08	□□□□□ -1.76
NRD1	YNL251C	SVP26	P38869	228 aa		4.08	□□□□□ -1.76
NRD1	YNL251C	RPS23A	P0CX29	145 aa	Known RBP	4.07	□□□□□ -1.76
NRD1	YNL251C	RPS23B	P0CX30	145 aa		4.07	□□□□□ -1.76
NRD1	YNL251C	RPL16A	P26784	199 aa	Known RBP	4.07	□□□□□ -1.76
NRD1	YNL251C	MRPL38	P35996	138 aa	Predicted RBP	4.07	□□□□□ -1.76
NRD1	YNL251C	RRT13	P40042	185 aa		4.07	□□□□□ -1.76
NRD1	YNL251C	ALG13	P53178	202 aa		4.07	□□□□□ -1.76
NRD1	YNL251C	YNL234W	P53857	426 aa		4.07	□□□□□ -1.76
NRD1	YNL251C	SHU1	P38751	150 aa		4.07	□□□□□ -1.76
NRD1	YNL251C	YGR219W	P53307	113 aa		4.07	□□□□□ -1.76
NRD1	YNL251C	QCR8	P08525	94 aa		4.06	□□□□□ -1.76
NRD1	YNL251C	RPL16B	P26785	198 aa	Known RBP	4.06	□□□□□ -1.76
NRD1	YNL251C	YER187W	P40102	141 aa		4.06	□□□□□ -1.76
NRD1	YNL251C	RPL15A	P05748	204 aa	Known RBP	4.05	□□□□□ -1.76
NRD1	YNL251C	IES6	P32617	166 aa		4.05	□□□□□ -1.76
NRD1	YNL251C	POR2	P40478	281 aa		4.05	□□□□□ -1.76
NRD1	YNL251C	PBP4	Q07362	185 aa	Known RBP	4.05	□□□□□ -1.76
NRD1	YNL251C	YLR042C	Q07990	161 aa		4.05	□□□□□ -1.76
NRD1	YNL251C	YBR200W-A	Q3E755	54 aa		4.05	□□□□□ -1.76
NRD1	YNL251C	CTR2	P38865	189 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	KEG1	P43614	200 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	YBR209W	P38311	105 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	YNL194C	P40169	301 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	YGR025W	P53216	100 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	PPT2	Q12036	173 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	YDL009C	Q12210	107 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	YMR175W-A	Q3E766	64 aa		4.04	□□□□□ -1.76
NRD1	YNL251C	UTH1	P36135	365 aa		4.03	□□□□□ -1.76
NRD1	YNL251C	KRE9	P39005	276 aa		4.03	□□□□□ -1.76
NRD1	YNL251C	RGM1	Q00453	211 aa		4.03	□□□□□ -1.76
NRD1	YNL251C	YLR412C-A	Q3E742	68 aa		4.03	□□□□□ -1.76
NRD1	YNL251C	YLR285C-A	Q3E771	56 aa		4.03	□□□□□ -1.76
NRD1	YNL251C	YOL085C	Q99345	113 aa		4.03	□□□□□ -1.76
NRD1	YNL251C	IRA2	P19158	3079 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms