RNA–Protein interactions for RNA: YNL216W

RAP1, Transcript of Essential DNA-binding transcription regulator that binds many loci, yeast

Gene RAP1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAP1	YNL216W	RRT13	P40042	185 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	GLE2	P40066	365 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	YMR181C	Q03231	154 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	PFY1	P07274	126 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	AIM19	P40502	157 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	YGR018C	P53211	109 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	YLR194C	Q05777	254 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	PBA1	Q05778	276 aa		4.98	□□□□□ -1.61
RAP1	YNL216W	IES6	P32617	166 aa		4.97	□□□□□ -1.61
RAP1	YNL216W	YNL190W	P53872	204 aa		4.97	□□□□□ -1.61
RAP1	YNL216W	SVP26	P38869	228 aa		4.97	□□□□□ -1.61
RAP1	YNL216W	KSH1	Q8TGJ3	72 aa		4.97	□□□□□ -1.61
RAP1	YNL216W	MED6	P38782	295 aa		4.96	□□□□□ -1.62
RAP1	YNL216W	PCP1	P53259	346 aa		4.96	□□□□□ -1.62
RAP1	YNL216W	RPL18A	P0CX49	186 aa	Known RBP	4.96	□□□□□ -1.62
RAP1	YNL216W	RPL18B	P0CX50	186 aa	Known RBP	4.96	□□□□□ -1.62
RAP1	YNL216W	YBL071C	P38185	102 aa		4.96	□□□□□ -1.62
RAP1	YNL216W	YDR114C	Q04597	100 aa		4.96	□□□□□ -1.62
RAP1	YNL216W	HNT3	Q08702	217 aa		4.96	□□□□□ -1.62
RAP1	YNL216W	YBR209W	P38311	105 aa		4.95	□□□□□ -1.62
RAP1	YNL216W	SIM1	P40472	476 aa		4.95	□□□□□ -1.62
RAP1	YNL216W	TOS6	P48560	102 aa		4.95	□□□□□ -1.62
RAP1	YNL216W	RPL28	P02406	149 aa	Known RBP	4.95	□□□□□ -1.62
RAP1	YNL216W	RPS14A	P06367	137 aa	Known RBP	4.95	□□□□□ -1.62
RAP1	YNL216W	RRS1	Q08746	203 aa	Known RBP	4.95	□□□□□ -1.62
RAP1	YNL216W	YMR175W-A	Q3E766	64 aa		4.95	□□□□□ -1.62
RAP1	YNL216W	YER187W	P40102	141 aa		4.94	□□□□□ -1.62
RAP1	YNL216W	SHH4	Q06236	168 aa		4.94	□□□□□ -1.62
RAP1	YNL216W	ATP15	P21306	62 aa		4.93	□□□□□ -1.62
RAP1	YNL216W	YSY6	P38374	65 aa		4.93	□□□□□ -1.62
RAP1	YNL216W	NRM1	P53718	249 aa		4.93	□□□□□ -1.62
RAP1	YNL216W	YLR412C-A	Q3E742	68 aa		4.93	□□□□□ -1.62
RAP1	YNL216W	BET1	P22804	142 aa		4.92	□□□□□ -1.62
RAP1	YNL216W	YNL194C	P40169	301 aa		4.92	□□□□□ -1.62
RAP1	YNL216W	SFT1	P43682	97 aa		4.92	□□□□□ -1.62
RAP1	YNL216W	EMC6	Q12431	108 aa		4.92	□□□□□ -1.62
RAP1	YNL216W	YKL183C-A	Q3E765	70 aa		4.92	□□□□□ -1.62
RAP1	YNL216W	SPI1	P40092	148 aa		4.92	□□□□□ -1.62
RAP1	YNL216W	REE1	P40893	198 aa		4.91	□□□□□ -1.62
RAP1	YNL216W	YLR281C	Q05863	155 aa		4.91	□□□□□ -1.62
RAP1	YNL216W	LDB16	P25587	256 aa		4.91	□□□□□ -1.62
RAP1	YNL216W	YFL015C	P43578	164 aa		4.91	□□□□□ -1.62
RAP1	YNL216W	YHR213W	P0CI67	198 aa		4.9	□□□□□ -1.62
RAP1	YNL216W	GAT3	Q07928	141 aa		4.9	□□□□□ -1.62
RAP1	YNL216W	YOR029W	Q12243	111 aa		4.9	□□□□□ -1.62
RAP1	YNL216W	FPR1	P20081	114 aa	Known RBP	4.9	□□□□□ -1.63
RAP1	YNL216W	RPL16B	P26785	198 aa	Known RBP	4.9	□□□□□ -1.63
RAP1	YNL216W	YGR219W	P53307	113 aa		4.9	□□□□□ -1.63
RAP1	YNL216W	MRPS12	P53732	153 aa		4.9	□□□□□ -1.63
RAP1	YNL216W	TDA7	P53882	636 aa	Predicted RBP	4.9	□□□□□ -1.63
RAP1	YNL216W	SDC1	Q03323	175 aa		4.9	□□□□□ -1.63
RAP1	YNL216W	GLT1	Q12680	2145 aa	Known RBP	4.9	□□□□□ -1.63
RAP1	YNL216W	YLR342W-A	Q3E810	57 aa		4.9	□□□□□ -1.63
RAP1	YNL216W	YKR073C	P36153	106 aa		4.89	□□□□□ -1.63
RAP1	YNL216W	YAR029W	P39549	74 aa		4.89	□□□□□ -1.63
RAP1	YNL216W	YOR008C-A	Q3E7B9	74 aa		4.89	□□□□□ -1.63
RAP1	YNL216W	PGU1	P47180	361 aa		4.89	□□□□□ -1.63
RAP1	YNL216W	YHR214C-D	P0CX93	97 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	MTC6	P38849	526 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	MPC2	P38857	129 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	HAL1	Q01766	294 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	VPS13	Q07878	3144 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	YFL019C	P43576	117 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	IMP2	P46972	177 aa		4.88	□□□□□ -1.63
RAP1	YNL216W	FAS1	P07149	2051 aa	Known RBP	4.88	□□□□□ -1.63
RAP1	YNL216W	YGR164W	P53291	111 aa		4.87	□□□□□ -1.63
RAP1	YNL216W	YML122C	Q03207	126 aa		4.87	□□□□□ -1.63
RAP1	YNL216W	RRT15	Q3E811	62 aa		4.87	□□□□□ -1.63
RAP1	YNL216W	YER175W-A	Q8TGU4	54 aa		4.87	□□□□□ -1.63
RAP1	YNL216W	HUR1	P45820	110 aa		4.87	□□□□□ -1.63
RAP1	YNL216W	YLR285C-A	Q3E771	56 aa		4.87	□□□□□ -1.63
RAP1	YNL216W	DCV1	P43595	202 aa		4.86	□□□□□ -1.63
RAP1	YNL216W	PPT2	Q12036	173 aa		4.86	□□□□□ -1.63
RAP1	YNL216W	YDR246W-A	Q3E763	66 aa		4.86	□□□□□ -1.63
RAP1	YNL216W	YNL277W-A	Q3E7Z0	62 aa		4.86	□□□□□ -1.63
RAP1	YNL216W	UBC4	P15731	148 aa		4.86	□□□□□ -1.63
RAP1	YNL216W	YKR045C	P36138	183 aa		4.86	□□□□□ -1.63
RAP1	YNL216W	YBR144C	P34215	104 aa		4.85	□□□□□ -1.63
RAP1	YNL216W	MSA2	P36157	363 aa		4.85	□□□□□ -1.63
RAP1	YNL216W	RPL15A	P05748	204 aa	Known RBP	4.84	□□□□□ -1.63
RAP1	YNL216W	KRE9	P39005	276 aa		4.84	□□□□□ -1.63
RAP1	YNL216W	YIL086C	P40503	102 aa		4.84	□□□□□ -1.63
RAP1	YNL216W	IRA2	P19158	3079 aa		4.84	□□□□□ -1.63
RAP1	YNL216W	BPH1	P25356	2167 aa		4.84	□□□□□ -1.63
RAP1	YNL216W	YOR034C-A	Q3E735	80 aa		4.84	□□□□□ -1.64
RAP1	YNL216W	TDA8	Q6B2U8	126 aa		4.84	□□□□□ -1.64
RAP1	YNL216W	YER084W	P40057	128 aa		4.83	□□□□□ -1.64
RAP1	YNL216W	PIR5	P46999	287 aa		4.83	□□□□□ -1.64
RAP1	YNL216W	YOR268C	Q08734	132 aa		4.83	□□□□□ -1.64
RAP1	YNL216W	CCW14	O13547	238 aa		4.83	□□□□□ -1.64
RAP1	YNL216W	RRT1	P38192	103 aa		4.83	□□□□□ -1.64
RAP1	YNL216W	RPS14B	P39516	138 aa	Known RBP	4.83	□□□□□ -1.64
RAP1	YNL216W	YLR156W	P0CE96	114 aa		4.82	□□□□□ -1.64
RAP1	YNL216W	YLR159W	P0CE97	114 aa		4.82	□□□□□ -1.64
RAP1	YNL216W	YLR161W	P0CE98	114 aa		4.82	□□□□□ -1.64
RAP1	YNL216W	YHR022C	P38763	256 aa		4.82	□□□□□ -1.64
RAP1	YNL216W	YJL027C	P47063	138 aa	Predicted RBP	4.82	□□□□□ -1.64
RAP1	YNL216W	RNH203	Q12338	110 aa		4.82	□□□□□ -1.64
RAP1	YNL216W	YIL046W-A	Q3E7Z4	54 aa		4.82	□□□□□ -1.64
RAP1	YNL216W	AIM4	P38305	123 aa	Predicted RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms