RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W VTC1P40046 129 aaRIP-Chip data3.33□□□□□ -1.88not detected
PEP5YMR231W FIP1P45976 327 aa3.33□□□□□ -1.88
PEP5YMR231W YAR1P46683 200 aa3.33□□□□□ -1.88
PEP5YMR231W YNL234WP53857 426 aa3.33□□□□□ -1.88
PEP5YMR231W PHO85P17157 305 aa3.33□□□□□ -1.88
PEP5YMR231W TOM6P33448 61 aa3.33□□□□□ -1.88
PEP5YMR231W DCV1P43595 202 aa3.33□□□□□ -1.88
PEP5YMR231W ATP23P53722 227 aa3.33□□□□□ -1.88
PEP5YMR231W YPL038W-AQ3E7B4 63 aa3.33□□□□□ -1.88
PEP5YMR231W ENV10Q99382 181 aa3.33□□□□□ -1.88
PEP5YMR231W INO2P26798 304 aa3.33□□□□□ -1.88
PEP5YMR231W NRG2P38082 220 aa3.33□□□□□ -1.88
PEP5YMR231W SBH2P52871 88 aa3.33□□□□□ -1.88
PEP5YMR231W BRR2P32639 2163 aaKnown RBP3.33□□□□□ -1.88
PEP5YMR231W YLR236CA0A023PZG4 107 aa3.32□□□□□ -1.88
PEP5YMR231W HUA1P40325 198 aa3.32□□□□□ -1.88
PEP5YMR231W NCE103P53615 221 aa3.32□□□□□ -1.88
PEP5YMR231W YCL021W-AQ96VH3 125 aa3.32□□□□□ -1.88
PEP5YMR231W YHL042WP38729 150 aa3.31□□□□□ -1.88
PEP5YMR231W SHU1P38751 150 aa3.31□□□□□ -1.88
PEP5YMR231W YIA6P40556 373 aa3.31□□□□□ -1.88
PEP5YMR231W YMR181CQ03231 154 aa3.31□□□□□ -1.88
PEP5YMR231W TOM1Q03280 3268 aa3.31□□□□□ -1.88
PEP5YMR231W RPL16AP26784 199 aaKnown RBP3.3□□□□□ -1.88
PEP5YMR231W CTR2P38865 189 aa3.3□□□□□ -1.88
PEP5YMR231W UBC11P52492 156 aa3.3□□□□□ -1.88
PEP5YMR231W UBC5P15732 148 aa3.3□□□□□ -1.88
PEP5YMR231W YFR057WP43625 151 aa3.3□□□□□ -1.88
PEP5YMR231W RGM1Q00453 211 aa3.3□□□□□ -1.88
PEP5YMR231W YDL009CQ12210 107 aa3.3□□□□□ -1.88
PEP5YMR231W RPL15BP54780 204 aaPredicted RBP3.3□□□□□ -1.88
PEP5YMR231W BEM2P39960 2167 aaKnown RBP3.3□□□□□ -1.88
PEP5YMR231W SEN1Q00416 2231 aaKnown RBP3.29□□□□□ -1.88
PEP5YMR231W VMA11P32842 164 aa3.29□□□□□ -1.88
PEP5YMR231W MPC2P38857 129 aa3.29□□□□□ -1.88
PEP5YMR231W YER085CP40058 173 aa3.29□□□□□ -1.88
PEP5YMR231W SMP1P38128 452 aa3.29□□□□□ -1.88
PEP5YMR231W SVP26P38869 228 aa3.29□□□□□ -1.88
PEP5YMR231W RNH203Q12338 110 aa3.29□□□□□ -1.88
PEP5YMR231W RPR2P40571 144 aa3.28□□□□□ -1.88
PEP5YMR231W BLM10P43583 2143 aa3.28□□□□□ -1.88
PEP5YMR231W SEC16P48415 2195 aaKnown RBP3.28□□□□□ -1.88
PEP5YMR231W RRT13P40042 185 aa3.28□□□□□ -1.88
PEP5YMR231W YDL241WQ07738 123 aa3.28□□□□□ -1.88
PEP5YMR231W COX17Q12287 69 aa3.28□□□□□ -1.88
PEP5YMR231W YHR139C-AO13536 103 aa3.28□□□□□ -1.89
PEP5YMR231W RPL29P05747 59 aaPredicted RBP3.28□□□□□ -1.89
PEP5YMR231W VHS2P40463 436 aa3.28□□□□□ -1.89
PEP5YMR231W KEG1P43614 200 aa3.28□□□□□ -1.89
PEP5YMR231W RDS3Q06835 107 aaPredicted RBP3.28□□□□□ -1.89
PEP5YMR231W YPL278CQ08990 100 aa3.28□□□□□ -1.89
PEP5YMR231W ATP15P21306 62 aa3.27□□□□□ -1.89
PEP5YMR231W TOA2P32774 122 aa3.27□□□□□ -1.89
PEP5YMR231W COX14P39103 70 aa3.27□□□□□ -1.89
PEP5YMR231W SIM1P40472 476 aa3.27□□□□□ -1.89
PEP5YMR231W YLR361C-AQ3E795 98 aa3.27□□□□□ -1.89
PEP5YMR231W PPT2Q12036 173 aa3.27□□□□□ -1.89
PEP5YMR231W MIG3P39943 394 aa3.26□□□□□ -1.89
PEP5YMR231W ACC1Q00955 2233 aaKnown RBP3.26□□□□□ -1.89
PEP5YMR231W RPL16BP26785 198 aaKnown RBP3.26□□□□□ -1.89
PEP5YMR231W ARC15P40518 154 aaRIP-Chip data3.26□□□□□ -1.89not detected
PEP5YMR231W MRPS8Q03799 155 aa3.26□□□□□ -1.89
PEP5YMR231W YCL048W-AQ2V2Q2 79 aa3.26□□□□□ -1.89
PEP5YMR231W RPS28BP0C0X0 67 aaKnown RBP3.25□□□□□ -1.89
PEP5YMR231W VPS55P47111 140 aa3.25□□□□□ -1.89
PEP5YMR231W YLR042CQ07990 161 aa3.25□□□□□ -1.89
PEP5YMR231W YPR013CQ12145 317 aa3.25□□□□□ -1.89
PEP5YMR231W RPS28AQ3E7X9 67 aaPredicted RBP3.25□□□□□ -1.89
PEP5YMR231W VPS13Q07878 3144 aa3.25□□□□□ -1.89
PEP5YMR231W YSY6P38374 65 aa3.25□□□□□ -1.89
PEP5YMR231W YEL008WP40001 126 aa3.25□□□□□ -1.89
PEP5YMR231W YGR164WP53291 111 aa3.25□□□□□ -1.89
PEP5YMR231W POL2P21951 2222 aaKnown RBP3.25□□□□□ -1.89
PEP5YMR231W CWP2P43497 92 aa3.25□□□□□ -1.89
PEP5YMR231W HUR1P45820 110 aa3.25□□□□□ -1.89
PEP5YMR231W YMR244WQ04018 355 aa3.25□□□□□ -1.89
PEP5YMR231W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PEP5YMR231W PRM7Q12459 698 aa3.24□□□□□ -1.89
PEP5YMR231W MSN1P22148 382 aa3.24□□□□□ -1.89
PEP5YMR231W YIR020CP40575 100 aa3.24□□□□□ -1.89
PEP5YMR231W YLR412C-AQ3E742 68 aa3.24□□□□□ -1.89
PEP5YMR231W YBR126W-AQ8TGU7 68 aa3.24□□□□□ -1.89
PEP5YMR231W CAX4P53223 239 aa3.23□□□□□ -1.89
PEP5YMR231W RSM19P53733 91 aaPredicted RBP3.23□□□□□ -1.89
PEP5YMR231W MET32Q12041 191 aa3.23□□□□□ -1.89
PEP5YMR231W ECM12O13529 151 aa3.23□□□□□ -1.89
PEP5YMR231W RPL28P02406 149 aaKnown RBP3.23□□□□□ -1.89
PEP5YMR231W WWM1P43582 211 aaKnown RBP3.23□□□□□ -1.89
PEP5YMR231W RPS11AP0CX47 156 aaKnown RBP3.23□□□□□ -1.89
PEP5YMR231W RPS11BP0CX48 156 aaKnown RBP3.23□□□□□ -1.89
PEP5YMR231W RPL18AP0CX49 186 aaKnown RBP3.23□□□□□ -1.89
PEP5YMR231W RPL18BP0CX50 186 aaKnown RBP3.23□□□□□ -1.89
PEP5YMR231W YGR039WP53225 103 aa3.23□□□□□ -1.89
PEP5YMR231W HOR7Q05827 59 aa3.23□□□□□ -1.89
PEP5YMR231W SPO24Q3E752 67 aa3.23□□□□□ -1.89
PEP5YMR231W YDR246W-AQ3E763 66 aa3.23□□□□□ -1.89
PEP5YMR231W YMR175W-AQ3E766 64 aa3.23□□□□□ -1.89
PEP5YMR231W YER121WP40076 114 aa3.22□□□□□ -1.89
PEP5YMR231W YER145C-AA0A023PYF4 145 aa3.22□□□□□ -1.89
PEP5YMR231W ICY1Q04329 127 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 103 ms