RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C RPS22BQ3E7Y3 130 aaKnown RBP2.53□□□□□ -2
ATG17YLR423C ROM2P51862 1356 aaKnown RBP2.52□□□□□ -2.01
ATG17YLR423C RPL37BP51402 88 aaKnown RBP2.52□□□□□ -2.01
ATG17YLR423C PRM3Q08931 133 aa2.52□□□□□ -2.01
ATG17YLR423C FIG2P25653 1609 aa2.52□□□□□ -2.01
ATG17YLR423C UTP11P34247 250 aaPredicted RBP2.51□□□□□ -2.01
ATG17YLR423C COA4Q05809 96 aa2.51□□□□□ -2.01
ATG17YLR423C GSC2P40989 1895 aa2.5□□□□□ -2.01
ATG17YLR423C PMD1P32634 1753 aa2.49□□□□□ -2.01
ATG17YLR423C GTT2Q12390 233 aa2.49□□□□□ -2.01
ATG17YLR423C RTC6O14464 93 aa2.48□□□□□ -2.01
ATG17YLR423C VMA7P39111 118 aa2.48□□□□□ -2.01
ATG17YLR423C SAE3P89114 91 aa2.48□□□□□ -2.01
ATG17YLR423C SLH1P53327 1967 aaKnown RBP2.47□□□□□ -2.01
ATG17YLR423C AIM11P87275 137 aa2.47□□□□□ -2.01
ATG17YLR423C ERV14P53173 138 aa2.46□□□□□ -2.02
ATG17YLR423C UTP10P42945 1769 aaKnown RBP2.46□□□□□ -2.02
ATG17YLR423C CUP1-1P0CX80 61 aa2.45□□□□□ -2.02
ATG17YLR423C CUP1-2P0CX81 61 aa2.45□□□□□ -2.02
ATG17YLR423C GSP1P32835 219 aaKnown RBP2.45□□□□□ -2.02
ATG17YLR423C AIM18P38884 321 aa2.45□□□□□ -2.02
ATG17YLR423C YLR118CQ12354 227 aa2.45□□□□□ -2.02
ATG17YLR423C SEC59P20048 519 aa2.44□□□□□ -2.02
ATG17YLR423C YHR213W-BQ8TGK1 99 aa2.44□□□□□ -2.02
ATG17YLR423C HKR1P41809 1802 aa2.43□□□□□ -2.02
ATG17YLR423C RPL36BO14455 100 aaKnown RBP2.43□□□□□ -2.02
ATG17YLR423C RPL36AP05745 100 aaPredicted RBP2.43□□□□□ -2.02
ATG17YLR423C AIM36Q03798 255 aa2.43□□□□□ -2.02
ATG17YLR423C COA6Q3E846 104 aa2.42□□□□□ -2.02
ATG17YLR423C CDC39P25655 2108 aaKnown RBP2.42□□□□□ -2.02
ATG17YLR423C HHY1P39982 102 aa2.41□□□□□ -2.02
ATG17YLR423C FRQ1Q06389 190 aa2.41□□□□□ -2.02
ATG17YLR423C LDB18Q07887 179 aa2.41□□□□□ -2.02
ATG17YLR423C YLR099W-AQ3E798 87 aa2.41□□□□□ -2.02
ATG17YLR423C AIM4P38305 123 aaPredicted RBP2.4□□□□□ -2.03
ATG17YLR423C YKL044WP36092 106 aa2.39□□□□□ -2.03
ATG17YLR423C YSF3P0C074 85 aaPredicted RBP2.37□□□□□ -2.03
ATG17YLR423C TEL1P38110 2787 aa2.37□□□□□ -2.03
ATG17YLR423C FIT3Q08907 204 aa2.36□□□□□ -2.03
ATG17YLR423C YOR376W-AQ3E805 51 aa2.36□□□□□ -2.03
ATG17YLR423C YDR034W-BQ6Q5X2 51 aa2.36□□□□□ -2.03
ATG17YLR423C YLR419WQ06698 1435 aaKnown RBP2.35□□□□□ -2.03
ATG17YLR423C TAO3P40468 2376 aa2.35□□□□□ -2.03
ATG17YLR423C MED11Q99278 115 aa2.35□□□□□ -2.03
ATG17YLR423C APS2Q00381 147 aa2.34□□□□□ -2.03
ATG17YLR423C FCF2Q12035 217 aaPredicted RBP2.34□□□□□ -2.03
ATG17YLR423C WIP1Q2V2P8 89 aa2.34□□□□□ -2.03
ATG17YLR423C HFA1P32874 2273 aa2.34□□□□□ -2.04
ATG17YLR423C ECM29P38737 1868 aa2.33□□□□□ -2.04
ATG17YLR423C YER188C-AP0C0V2 99 aa2.33□□□□□ -2.04
ATG17YLR423C YJL197C-AP0C5P0 93 aa2.33□□□□□ -2.04
ATG17YLR423C RPB11P38902 120 aa2.33□□□□□ -2.04
ATG17YLR423C GPI19Q04082 140 aa2.33□□□□□ -2.04
ATG17YLR423C GCN1P33892 2672 aaKnown RBP2.32□□□□□ -2.04
ATG17YLR423C HPA2Q06592 156 aa2.32□□□□□ -2.04
ATG17YLR423C YBR013CP38215 129 aa2.31□□□□□ -2.04
ATG17YLR423C SNF11P38956 169 aa2.31□□□□□ -2.04
ATG17YLR423C MIC27P50945 234 aa2.31□□□□□ -2.04
ATG17YLR423C TOR2P32600 2474 aaKnown RBP2.31□□□□□ -2.04
ATG17YLR423C RPO41P13433 1351 aaKnown RBP2.3□□□□□ -2.04
ATG17YLR423C FLO1P32768 1537 aa2.29□□□□□ -2.04
ATG17YLR423C YIR021W-AQ3E739 70 aa2.29□□□□□ -2.04
ATG17YLR423C YMR141CP40211 102 aa2.28□□□□□ -2.04
ATG17YLR423C MVB12P42939 101 aa2.28□□□□□ -2.04
ATG17YLR423C YFR035CP43608 114 aa2.28□□□□□ -2.04
ATG17YLR423C SPC24Q04477 213 aa2.28□□□□□ -2.04
ATG17YLR423C YLR194CQ05777 254 aa2.28□□□□□ -2.04
ATG17YLR423C YOR097CQ12274 175 aaPredicted RBP2.28□□□□□ -2.04
ATG17YLR423C HUG1Q6Q5K6 68 aa2.28□□□□□ -2.04
ATG17YLR423C MLP1Q02455 1875 aaKnown RBP2.28□□□□□ -2.04
ATG17YLR423C IRA1P18963 3092 aa2.28□□□□□ -2.05
ATG17YLR423C YCR099CP25657 155 aa2.27□□□□□ -2.05
ATG17YLR423C YIL163CP40448 117 aa2.27□□□□□ -2.05
ATG17YLR423C PRP8P33334 2413 aaKnown RBP2.26□□□□□ -2.05
ATG17YLR423C MOT1P32333 1867 aa2.24□□□□□ -2.05
ATG17YLR423C YIL014C-AQ02598 104 aa2.24□□□□□ -2.05
ATG17YLR423C FMP27Q06179 2628 aa2.24□□□□□ -2.05
ATG17YLR423C IRA2P19158 3079 aa2.23□□□□□ -2.05
ATG17YLR423C LYS2P07702 1392 aa2.23□□□□□ -2.05
ATG17YLR423C MRPL31P14063 131 aaPredicted RBP2.22□□□□□ -2.05
ATG17YLR423C TDA2P40045 126 aa2.22□□□□□ -2.05
ATG17YLR423C ICS3P47034 131 aa2.22□□□□□ -2.05
ATG17YLR423C YPL261CQ08976 102 aa2.22□□□□□ -2.05
ATG17YLR423C OST5Q92316 86 aa2.22□□□□□ -2.05
ATG17YLR423C MYO1P08964 1928 aa2.21□□□□□ -2.06
ATG17YLR423C UTP20P35194 2493 aaKnown RBP2.21□□□□□ -2.06
ATG17YLR423C RPL22AP05749 121 aaKnown RBP2.2□□□□□ -2.06
ATG17YLR423C EMP24P32803 203 aaKnown RBP2.18□□□□□ -2.06
ATG17YLR423C POR2P40478 281 aa2.18□□□□□ -2.06
ATG17YLR423C YAR029WP39549 74 aa2.17□□□□□ -2.06
ATG17YLR423C YER187WP40102 141 aa2.17□□□□□ -2.06
ATG17YLR423C YLR042CQ07990 161 aa2.17□□□□□ -2.06
ATG17YLR423C YHR130CP38834 111 aa2.16□□□□□ -2.06
ATG17YLR423C PAU12P53343 120 aa2.16□□□□□ -2.06
ATG17YLR423C SEN1Q00416 2231 aaKnown RBP2.15□□□□□ -2.06
ATG17YLR423C PAM16P42949 149 aa2.15□□□□□ -2.07
ATG17YLR423C RTR2Q12378 196 aa2.15□□□□□ -2.07
ATG17YLR423C OCA6Q12454 224 aa2.15□□□□□ -2.07
ATG17YLR423C RPL22BP56628 122 aaKnown RBP2.13□□□□□ -2.07
ATG17YLR423C YGL041C-BQ3E750 60 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms