RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI2	YLR398C	YHL018W	P38744	120 aa	Predicted RBP	5.03	□□□□□ -1.6
SKI2	YLR398C	YNL217W	P40152	326 aa		5.03	□□□□□ -1.6
SKI2	YLR398C	YER084W	P40057	128 aa		5.03	□□□□□ -1.6
SKI2	YLR398C	SUN4	P53616	420 aa		5.03	□□□□□ -1.6
SKI2	YLR398C	YMR295C	Q03559	197 aa		5.03	□□□□□ -1.6
SKI2	YLR398C	YLR422W	Q06409	1932 aa		5.03	□□□□□ -1.6
SKI2	YLR398C	RPL16A	P26784	199 aa	Known RBP	5.02	□□□□□ -1.61
SKI2	YLR398C	RPL16B	P26785	198 aa	Known RBP	5.02	□□□□□ -1.61
SKI2	YLR398C	YAR029W	P39549	74 aa		5.02	□□□□□ -1.61
SKI2	YLR398C	YLR358C	O13565	187 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	YKL102C	P34249	101 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	YGR045C	P53229	120 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	YFL041W-A	Q3E817	63 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	YBL029C-A	Q3E756	94 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	TSC3	Q3E790	80 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	MOH1	P38191	138 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	PCP1	P53259	346 aa		5.01	□□□□□ -1.61
SKI2	YLR398C	RPL34A	P87262	121 aa	Predicted RBP	5.01	□□□□□ -1.61
SKI2	YLR398C	KRE1	P17260	313 aa		5	□□□□□ -1.61
SKI2	YLR398C	YER039C-A	P0CD97	72 aa		5	□□□□□ -1.61
SKI2	YLR398C	RPL2A	P0CX45	254 aa	Known RBP	5	□□□□□ -1.61
SKI2	YLR398C	RPL2B	P0CX46	254 aa	Known RBP	5	□□□□□ -1.61
SKI2	YLR398C	TDA2	P40045	126 aa		5	□□□□□ -1.61
SKI2	YLR398C	YSY6	P38374	65 aa		5	□□□□□ -1.61
SKI2	YLR398C	YPR053C	Q6Q5F3	151 aa		4.99	□□□□□ -1.61
SKI2	YLR398C	RPL34B	P40525	121 aa	Known RBP	4.99	□□□□□ -1.61
SKI2	YLR398C	RPB10	P22139	70 aa		4.99	□□□□□ -1.61
SKI2	YLR398C	MRPL39	P36533	70 aa		4.99	□□□□□ -1.61
SKI2	YLR398C	DCV1	P43595	202 aa		4.99	□□□□□ -1.61
SKI2	YLR398C	YLR296W	Q05898	108 aa		4.98	□□□□□ -1.61
SKI2	YLR398C	YTH1	Q06102	208 aa	Predicted RBP	4.98	□□□□□ -1.61
SKI2	YLR398C	BRP1	P53194	125 aa		4.98	□□□□□ -1.61
SKI2	YLR398C	YCR006C	P25350	157 aa		4.98	□□□□□ -1.61
SKI2	YLR398C	SMP1	P38128	452 aa		4.98	□□□□□ -1.61
SKI2	YLR398C	YFL019C	P43576	117 aa		4.98	□□□□□ -1.61
SKI2	YLR398C	YMR317W	Q04893	1140 aa		4.98	□□□□□ -1.61
SKI2	YLR398C	YBR121C-A	P0C5L4	52 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	PGU1	P47180	361 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	RPL42A	P0CX27	106 aa	Known RBP	4.97	□□□□□ -1.61
SKI2	YLR398C	RPL42B	P0CX28	106 aa	Known RBP	4.97	□□□□□ -1.61
SKI2	YLR398C	SPC1	P46965	94 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	ALG13	P53178	202 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	SHU1	P38751	150 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	SIM1	P40472	476 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	CYT1	P07143	309 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	YDL186W	P48568	277 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	SBH1	P52870	82 aa		4.97	□□□□□ -1.61
SKI2	YLR398C	SPG4	Q04438	115 aa		4.96	□□□□□ -1.62
SKI2	YLR398C	YER187W	P40102	141 aa		4.96	□□□□□ -1.62
SKI2	YLR398C	YIR020C	P40575	100 aa		4.96	□□□□□ -1.62
SKI2	YLR398C	YMR31	P19955	123 aa		4.96	□□□□□ -1.62
SKI2	YLR398C	ICY1	Q04329	127 aa		4.95	□□□□□ -1.62
SKI2	YLR398C	GAT3	Q07928	141 aa		4.95	□□□□□ -1.62
SKI2	YLR398C	YOL160W	Q08321	113 aa		4.95	□□□□□ -1.62
SKI2	YLR398C	YCL048W-A	Q2V2Q2	79 aa		4.94	□□□□□ -1.62
SKI2	YLR398C	YCR022C	P25620	114 aa		4.94	□□□□□ -1.62
SKI2	YLR398C	KRE9	P39005	276 aa		4.94	□□□□□ -1.62
SKI2	YLR398C	AIM4	P38305	123 aa	Predicted RBP	4.94	□□□□□ -1.62
SKI2	YLR398C	UTH1	P36135	365 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	YNR077C	P53758	84 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	YJR107C-A	P0CT86	78 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	YNL234W	P53857	426 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	YOR029W	Q12243	111 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	HOT13	P36078	116 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	PEX17	P40155	199 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	YIL086C	P40503	102 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	YGR025W	P53216	100 aa		4.93	□□□□□ -1.62
SKI2	YLR398C	TOS8	P53147	276 aa		4.92	□□□□□ -1.62
SKI2	YLR398C	RPS23A	P0CX29	145 aa	Known RBP	4.92	□□□□□ -1.62
SKI2	YLR398C	RPS23B	P0CX30	145 aa		4.92	□□□□□ -1.62
SKI2	YLR398C	POR2	P40478	281 aa		4.92	□□□□□ -1.62
SKI2	YLR398C	UBC11	P52492	156 aa		4.92	□□□□□ -1.62
SKI2	YLR398C	YML122C	Q03207	126 aa		4.92	□□□□□ -1.62
SKI2	YLR398C	PBP4	Q07362	185 aa	Known RBP	4.92	□□□□□ -1.62
SKI2	YLR398C	RPS8A	P0CX39	200 aa	Known RBP	4.92	□□□□□ -1.62
SKI2	YLR398C	RPS8B	P0CX40	200 aa	Known RBP	4.92	□□□□□ -1.62
SKI2	YLR398C	MMS2	P53152	137 aa		4.92	□□□□□ -1.62
SKI2	YLR398C	LDB16	P25587	256 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	AGA1	P32323	725 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	ARC15	P40518	154 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
SKI2	YLR398C	MOT3	P54785	490 aa	Known RBP	4.91	□□□□□ -1.62
SKI2	YLR398C	PPT2	Q12036	173 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	YDL022C-A	P0C5L6	82 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	GCN1	P33892	2672 aa	Known RBP	4.91	□□□□□ -1.62
SKI2	YLR398C	YLR156W	P0CE96	114 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	YLR159W	P0CE97	114 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	YLR161W	P0CE98	114 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	YGR018C	P53211	109 aa		4.91	□□□□□ -1.62
SKI2	YLR398C	RSM19	P53733	91 aa	Predicted RBP	4.91	□□□□□ -1.62
SKI2	YLR398C	PFY1	P07274	126 aa		4.9	□□□□□ -1.62
SKI2	YLR398C	YEL067C	P39978	195 aa		4.9	□□□□□ -1.62
SKI2	YLR398C	YOR381W-A	Q3E804	55 aa		4.9	□□□□□ -1.62
SKI2	YLR398C	SVP26	P38869	228 aa		4.9	□□□□□ -1.63
SKI2	YLR398C	YKL183C-A	Q3E765	70 aa		4.9	□□□□□ -1.63
SKI2	YLR398C	YMR105W-A	Q8TGS8	64 aa		4.9	□□□□□ -1.63
SKI2	YLR398C	FPR1	P20081	114 aa	Known RBP	4.9	□□□□□ -1.63
SKI2	YLR398C	MPC2	P38857	129 aa		4.9	□□□□□ -1.63
SKI2	YLR398C	PMP3	P87284	55 aa		4.9	□□□□□ -1.63
SKI2	YLR398C	YOR268C	Q08734	132 aa		4.9	□□□□□ -1.63
SKI2	YLR398C	COA3	Q3E7B2	85 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms