RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YOL160WQ08321 113 aa1.82□□□□□ -2.12
VPS13YLL040C RPL32P38061 130 aaKnown RBP1.82□□□□□ -2.12
VPS13YLL040C YMR175W-AQ3E766 64 aa1.82□□□□□ -2.12
VPS13YLL040C PCL1P24867 279 aa1.82□□□□□ -2.12
VPS13YLL040C YFL051CP43552 160 aa1.81□□□□□ -2.12
VPS13YLL040C SPG4Q04438 115 aa1.81□□□□□ -2.12
VPS13YLL040C VPS13Q07878 3144 aa1.81□□□□□ -2.12
VPS13YLL040C YDL022C-AP0C5L6 82 aa1.81□□□□□ -2.12
VPS13YLL040C YSY6P38374 65 aa1.81□□□□□ -2.12
VPS13YLL040C YHL042WP38729 150 aa1.81□□□□□ -2.12
VPS13YLL040C YDR119W-AQ2V2P9 66 aa1.81□□□□□ -2.12
VPS13YLL040C SVP26P38869 228 aa1.81□□□□□ -2.12
VPS13YLL040C SKI6P46948 246 aaPredicted RBP1.81□□□□□ -2.12
VPS13YLL040C OST2P46964 130 aa1.81□□□□□ -2.12
VPS13YLL040C FOL3Q12676 427 aaPredicted RBP1.81□□□□□ -2.12
VPS13YLL040C YAL063C-AQ3E791 96 aa1.81□□□□□ -2.12
VPS13YLL040C CWP2P43497 92 aa1.81□□□□□ -2.12
VPS13YLL040C YDR182W-AQ3E796 67 aa1.81□□□□□ -2.12
VPS13YLL040C MRPL38P35996 138 aaPredicted RBP1.81□□□□□ -2.12
VPS13YLL040C YGR039WP53225 103 aa1.81□□□□□ -2.12
VPS13YLL040C MRPS8Q03799 155 aa1.81□□□□□ -2.12
VPS13YLL040C SIM1P40472 476 aa1.8□□□□□ -2.12
VPS13YLL040C ATX1P38636 73 aa1.8□□□□□ -2.12
VPS13YLL040C YLR302CO13544 120 aa1.8□□□□□ -2.12
VPS13YLL040C RPS11AP0CX47 156 aaKnown RBP1.8□□□□□ -2.12
VPS13YLL040C RPS11BP0CX48 156 aaKnown RBP1.8□□□□□ -2.12
VPS13YLL040C YBR090CP38253 122 aa1.8□□□□□ -2.12
VPS13YLL040C YOS1Q3E834 85 aa1.8□□□□□ -2.12
VPS13YLL040C OXA1P39952 402 aa1.8□□□□□ -2.12
VPS13YLL040C TOM7P53507 60 aa1.8□□□□□ -2.12
VPS13YLL040C RDL1Q12305 139 aaKnown RBP1.8□□□□□ -2.12
VPS13YLL040C HOT13P36078 116 aa1.8□□□□□ -2.12
VPS13YLL040C MPC2P38857 129 aa1.8□□□□□ -2.12
VPS13YLL040C YIR020CP40575 100 aa1.8□□□□□ -2.12
VPS13YLL040C KEG1P43614 200 aa1.8□□□□□ -2.12
VPS13YLL040C GLO1P50107 326 aa1.8□□□□□ -2.12
VPS13YLL040C AIM11P87275 137 aa1.8□□□□□ -2.12
VPS13YLL040C YML122CQ03207 126 aa1.8□□□□□ -2.12
VPS13YLL040C JID1Q12350 301 aa1.8□□□□□ -2.12
VPS13YLL040C YMR244WQ04018 355 aa1.8□□□□□ -2.12
VPS13YLL040C RPL16AP26784 199 aaKnown RBP1.8□□□□□ -2.12
VPS13YLL040C RRT13P40042 185 aa1.8□□□□□ -2.12
VPS13YLL040C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
VPS13YLL040C YAL065CO13511 128 aa1.79□□□□□ -2.12
VPS13YLL040C MIG3P39943 394 aa1.79□□□□□ -2.12
VPS13YLL040C YMR141CP40211 102 aa1.79□□□□□ -2.12
VPS13YLL040C YLR412C-AQ3E742 68 aa1.79□□□□□ -2.12
VPS13YLL040C SHU1P38751 150 aa1.79□□□□□ -2.12
VPS13YLL040C YAR1P46683 200 aa1.79□□□□□ -2.12
VPS13YLL040C CCH1P50077 2039 aa1.79□□□□□ -2.12
VPS13YLL040C RPS28BP0C0X0 67 aaKnown RBP1.79□□□□□ -2.12
VPS13YLL040C YFL065CP43539 102 aa1.79□□□□□ -2.12
VPS13YLL040C YPS5P53057 165 aa1.79□□□□□ -2.12
VPS13YLL040C YPR203WQ08994 102 aa1.79□□□□□ -2.12
VPS13YLL040C YOR029WQ12243 111 aa1.79□□□□□ -2.12
VPS13YLL040C RPS28AQ3E7X9 67 aaPredicted RBP1.79□□□□□ -2.12
VPS13YLL040C VPS55P47111 140 aa1.79□□□□□ -2.12
VPS13YLL040C YPL261CQ08976 102 aa1.79□□□□□ -2.12
VPS13YLL040C ENV10Q99382 181 aa1.79□□□□□ -2.12
VPS13YLL040C YPL229WQ99395 206 aa1.79□□□□□ -2.12
VPS13YLL040C VMA11P32842 164 aa1.79□□□□□ -2.12
VPS13YLL040C YEL067CP39978 195 aa1.79□□□□□ -2.12
VPS13YLL040C ICY1Q04329 127 aa1.79□□□□□ -2.12
VPS13YLL040C CYR1P08678 2026 aaKnown RBP1.78□□□□□ -2.12
VPS13YLL040C SPC29P33419 253 aa1.78□□□□□ -2.12
VPS13YLL040C YEL008WP40001 126 aa1.78□□□□□ -2.12
VPS13YLL040C KTI11Q3E840 82 aa1.78□□□□□ -2.12
VPS13YLL040C RPC10P40422 70 aa1.78□□□□□ -2.12
VPS13YLL040C PEX22P39718 180 aa1.78□□□□□ -2.12
VPS13YLL040C YPL080CQ02826 108 aa1.78□□□□□ -2.12
VPS13YLL040C VAM10Q08474 114 aa1.78□□□□□ -2.12
VPS13YLL040C YKL183C-AQ3E765 70 aa1.78□□□□□ -2.13
VPS13YLL040C FAS1P07149 2051 aaKnown RBP1.78□□□□□ -2.13
VPS13YLL040C ATP23P53722 227 aa1.77□□□□□ -2.13
VPS13YLL040C PMP3P87284 55 aa1.77□□□□□ -2.13
VPS13YLL040C BEM2P39960 2167 aaKnown RBP1.77□□□□□ -2.13
VPS13YLL040C MID2P36027 376 aa1.77□□□□□ -2.13
VPS13YLL040C YCR075W-AQ3E830 75 aa1.77□□□□□ -2.13
VPS13YLL040C YIA6P40556 373 aa1.77□□□□□ -2.13
VPS13YLL040C ALG13P53178 202 aa1.77□□□□□ -2.13
VPS13YLL040C CDC43P18898 376 aa1.77□□□□□ -2.13
VPS13YLL040C YPR013CQ12145 317 aa1.77□□□□□ -2.13
VPS13YLL040C MET32Q12041 191 aa1.77□□□□□ -2.13
VPS13YLL040C RPL39P04650 51 aa1.77□□□□□ -2.13
VPS13YLL040C YCR050CP25630 102 aa1.77□□□□□ -2.13
VPS13YLL040C HUR1P45820 110 aa1.77□□□□□ -2.13
VPS13YLL040C FIP1P45976 327 aa1.77□□□□□ -2.13
VPS13YLL040C YNL234WP53857 426 aa1.77□□□□□ -2.13
VPS13YLL040C YPR053CQ6Q5F3 151 aa1.77□□□□□ -2.13
VPS13YLL040C YRA2P36036 203 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
VPS13YLL040C KRE9P39005 276 aa1.76□□□□□ -2.13
VPS13YLL040C VTC1P40046 129 aaRIP-Chip data1.76□□□□□ -2.13not detected
VPS13YLL040C ECM12O13529 151 aa1.76□□□□□ -2.13
VPS13YLL040C MLF3P32047 452 aa1.76□□□□□ -2.13
VPS13YLL040C RPL16BP26785 198 aaKnown RBP1.76□□□□□ -2.13
VPS13YLL040C ARC15P40518 154 aaRIP-Chip data1.76□□□□□ -2.13not detected
VPS13YLL040C TMA7Q3E764 64 aaKnown RBP1.76□□□□□ -2.13
VPS13YLL040C UBC4P15731 148 aa1.76□□□□□ -2.13
VPS13YLL040C YCL021W-AQ96VH3 125 aa1.76□□□□□ -2.13
VPS13YLL040C ACC1Q00955 2233 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms