RNA–Protein interactions for RNA: YKL127W

PGM1, Transcript of Phosphoglucomutase, minor isoform, yeast

Gene PGM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGM1	YKL127W	SPG4	Q04438	115 aa		4.78	□□□□□ -1.64
PGM1	YKL127W	ATP15	P21306	62 aa		4.77	□□□□□ -1.65
PGM1	YKL127W	SOH1	P38633	127 aa		4.77	□□□□□ -1.65
PGM1	YKL127W	URM1	P40554	99 aa	Predicted RBP	4.77	□□□□□ -1.65
PGM1	YKL127W	YOR097C	Q12274	175 aa	Predicted RBP	4.77	□□□□□ -1.65
PGM1	YKL127W	SLO1	Q3E784	85 aa		4.77	□□□□□ -1.65
PGM1	YKL127W	RPL16A	P26784	199 aa	Known RBP	4.77	□□□□□ -1.65
PGM1	YKL127W	VHS2	P40463	436 aa		4.77	□□□□□ -1.65
PGM1	YKL127W	SIM1	P40472	476 aa		4.77	□□□□□ -1.65
PGM1	YKL127W	Q0255	P03881	472 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	RPS8A	P0CX39	200 aa	Known RBP	4.76	□□□□□ -1.65
PGM1	YKL127W	RPS8B	P0CX40	200 aa	Known RBP	4.76	□□□□□ -1.65
PGM1	YKL127W	YPT53	P36019	220 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	MIG3	P39943	394 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	YNL217W	P40152	326 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	CIN5	P40917	295 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	YFR035C	P43608	114 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	YJR146W	P47174	117 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	YLR042C	Q07990	161 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	SRL1	Q08673	210 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	IGO2	Q9P305	131 aa		4.76	□□□□□ -1.65
PGM1	YKL127W	YMR244W	Q04018	355 aa		4.75	□□□□□ -1.65
PGM1	YKL127W	YLR194C	Q05777	254 aa		4.75	□□□□□ -1.65
PGM1	YKL127W	RRG8	Q06109	277 aa		4.75	□□□□□ -1.65
PGM1	YKL127W	PRM3	Q08931	133 aa		4.75	□□□□□ -1.65
PGM1	YKL127W	NUM1	Q00402	2748 aa		4.75	□□□□□ -1.65
PGM1	YKL127W	YER085C	P40058	173 aa		4.75	□□□□□ -1.65
PGM1	YKL127W	YCR041W	P37265	110 aa		4.74	□□□□□ -1.65
PGM1	YKL127W	MRPS8	Q03799	155 aa		4.74	□□□□□ -1.65
PGM1	YKL127W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
PGM1	YKL127W	MRPL23	Q12487	163 aa	Predicted RBP	4.74	□□□□□ -1.65
PGM1	YKL127W	TAR1	Q8TGM6	124 aa		4.74	□□□□□ -1.65
PGM1	YKL127W	LSM6	Q06406	86 aa	Known RBP	4.73	□□□□□ -1.65
PGM1	YKL127W	CYC7	P00045	113 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	RPL18A	P0CX49	186 aa	Known RBP	4.72	□□□□□ -1.65
PGM1	YKL127W	RPL18B	P0CX50	186 aa	Known RBP	4.72	□□□□□ -1.65
PGM1	YKL127W	NHP2	P32495	156 aa	Predicted RBP	4.72	□□□□□ -1.65
PGM1	YKL127W	RRT13	P40042	185 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	CCW14	O13547	238 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	RPL28	P02406	149 aa	Known RBP	4.72	□□□□□ -1.65
PGM1	YKL127W	MID2	P36027	376 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	POP7	P38291	140 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	FIP1	P45976	327 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	YNL190W	P53872	204 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	MET32	Q12041	191 aa		4.72	□□□□□ -1.65
PGM1	YKL127W	YGL088W	P53151	121 aa		4.71	□□□□□ -1.66
PGM1	YKL127W	TRP1	P00912	224 aa		4.7	□□□□□ -1.66
PGM1	YKL127W	YBR209W	P38311	105 aa		4.7	□□□□□ -1.66
PGM1	YKL127W	MRPS12	P53732	153 aa		4.7	□□□□□ -1.66
PGM1	YKL127W	RPB9	P27999	122 aa		4.69	□□□□□ -1.66
PGM1	YKL127W	UGX2	P32772	223 aa		4.69	□□□□□ -1.66
PGM1	YKL127W	DUT1	P33317	147 aa		4.69	□□□□□ -1.66
PGM1	YKL127W	YEL008W	P40001	126 aa		4.69	□□□□□ -1.66
PGM1	YKL127W	PEX17	P40155	199 aa		4.69	□□□□□ -1.66
PGM1	YKL127W	OST2	P46964	130 aa		4.69	□□□□□ -1.66
PGM1	YKL127W	YER145C-A	A0A023PYF4	145 aa		4.67	□□□□□ -1.66
PGM1	YKL127W	RPL43A	P0CX25	92 aa	Known RBP	4.67	□□□□□ -1.66
PGM1	YKL127W	RPL43B	P0CX26	92 aa		4.67	□□□□□ -1.66
PGM1	YKL127W	ATX1	P38636	73 aa		4.67	□□□□□ -1.66
PGM1	YKL127W	SHU1	P38751	150 aa		4.67	□□□□□ -1.66
PGM1	YKL127W	HPA2	Q06592	156 aa		4.67	□□□□□ -1.66
PGM1	YKL127W	RPL15A	P05748	204 aa	Known RBP	4.66	□□□□□ -1.66
PGM1	YKL127W	RPL2A	P0CX45	254 aa	Known RBP	4.66	□□□□□ -1.66
PGM1	YKL127W	RPL2B	P0CX46	254 aa	Known RBP	4.66	□□□□□ -1.66
PGM1	YKL127W	YIL059C	P40520	121 aa		4.66	□□□□□ -1.66
PGM1	YKL127W	YCH1	P42937	148 aa		4.66	□□□□□ -1.66
PGM1	YKL127W	ALG13	P53178	202 aa		4.66	□□□□□ -1.66
PGM1	YKL127W	YCL021W-A	Q96VH3	125 aa		4.66	□□□□□ -1.66
PGM1	YKL127W	RPS11A	P0CX47	156 aa	Known RBP	4.65	□□□□□ -1.67
PGM1	YKL127W	RPS11B	P0CX48	156 aa	Known RBP	4.65	□□□□□ -1.67
PGM1	YKL127W	YHR212W-A	P0CX91	67 aa		4.65	□□□□□ -1.67
PGM1	YKL127W	INO4	P13902	151 aa		4.65	□□□□□ -1.67
PGM1	YKL127W	RPA12	P32529	125 aa	Known RBP	4.65	□□□□□ -1.67
PGM1	YKL127W	UBC5	P15732	148 aa		4.64	□□□□□ -1.67
PGM1	YKL127W	ISD11	Q6Q560	94 aa		4.64	□□□□□ -1.67
PGM1	YKL127W	UTP20	P35194	2493 aa	Known RBP	4.64	□□□□□ -1.67
PGM1	YKL127W	DSE2	P38844	325 aa		4.63	□□□□□ -1.67
PGM1	YKL127W	YIA6	P40556	373 aa		4.63	□□□□□ -1.67
PGM1	YKL127W	YPS5	P53057	165 aa		4.63	□□□□□ -1.67
PGM1	YKL127W	PMP3	P87284	55 aa		4.63	□□□□□ -1.67
PGM1	YKL127W	QCR8	P08525	94 aa		4.63	□□□□□ -1.67
PGM1	YKL127W	KRE9	P39005	276 aa		4.63	□□□□□ -1.67
PGM1	YKL127W	YMR295C	Q03559	197 aa		4.62	□□□□□ -1.67
PGM1	YKL127W	COX10	P21592	462 aa		4.61	□□□□□ -1.67
PGM1	YKL127W	NRG2	P38082	220 aa		4.61	□□□□□ -1.67
PGM1	YKL127W	YBR219C	P38317	127 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	YHR130C	P38834	111 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	MPC2	P38857	129 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	ARC15	P40518	154 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
PGM1	YKL127W	YFL065C	P43539	102 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	ABF2	Q02486	183 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	YPR203W	Q08994	102 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	EOS1	P53938	366 aa		4.6	□□□□□ -1.67
PGM1	YKL127W	COX14	P39103	70 aa		4.58	□□□□□ -1.68
PGM1	YKL127W	YAR029W	P39549	74 aa		4.58	□□□□□ -1.68
PGM1	YKL127W	CWP2	P43497	92 aa		4.58	□□□□□ -1.68
PGM1	YKL127W	YDL186W	P48568	277 aa		4.58	□□□□□ -1.68
PGM1	YKL127W	PPT2	Q12036	173 aa		4.58	□□□□□ -1.68
PGM1	YKL127W	HUR1	P45820	110 aa		4.58	□□□□□ -1.68
PGM1	YKL127W	RGM1	Q00453	211 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms