RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W DCN1Q12395 269 aa3.98□□□□□ -1.77
PRE3YJL001W DDR48P18899 430 aaKnown RBP3.97□□□□□ -1.77
PRE3YJL001W YEL045CP32616 141 aa3.97□□□□□ -1.77
PRE3YJL001W YBL081WP38180 368 aaKnown RBP3.97□□□□□ -1.77
PRE3YJL001W YHR140WP38842 239 aa3.97□□□□□ -1.77
PRE3YJL001W CSM4Q08955 156 aa3.97□□□□□ -1.77
PRE3YJL001W ARC18Q05933 178 aaKnown RBP3.96□□□□□ -1.78
PRE3YJL001W MRPS9P38120 278 aa3.95□□□□□ -1.78
PRE3YJL001W PEX22P39718 180 aa3.95□□□□□ -1.78
PRE3YJL001W THG1P53215 237 aaKnown RBP3.95□□□□□ -1.78
PRE3YJL001W GPI19Q04082 140 aa3.95□□□□□ -1.78
PRE3YJL001W YDR010CQ12426 110 aa3.95□□□□□ -1.78
PRE3YJL001W RPL27AP0C2H6 136 aaKnown RBP3.94□□□□□ -1.78
PRE3YJL001W YGL010WP25338 174 aa3.94□□□□□ -1.78
PRE3YJL001W NTF2P33331 125 aaKnown RBP3.94□□□□□ -1.78
PRE3YJL001W PAM17P36147 197 aa3.94□□□□□ -1.78
PRE3YJL001W YAL064WP39711 94 aa3.94□□□□□ -1.78
PRE3YJL001W SNA2P56508 79 aa3.94□□□□□ -1.78
PRE3YJL001W TVP18Q04767 167 aa3.94□□□□□ -1.78
PRE3YJL001W YNR034W-AQ3E841 98 aa3.94□□□□□ -1.78
PRE3YJL001W HMRA1P0CY11 126 aa3.93□□□□□ -1.78
PRE3YJL001W HSP10P38910 106 aa3.93□□□□□ -1.78
PRE3YJL001W DCV1P43595 202 aa3.93□□□□□ -1.78
PRE3YJL001W IGD1P43598 195 aa3.93□□□□□ -1.78
PRE3YJL001W GTO3Q04806 366 aa3.93□□□□□ -1.78
PRE3YJL001W PAU7P39545 55 aa3.92□□□□□ -1.78
PRE3YJL001W RPC10P40422 70 aa3.92□□□□□ -1.78
PRE3YJL001W CIN5P40917 295 aa3.92□□□□□ -1.78
PRE3YJL001W PAU5P43575 122 aa3.92□□□□□ -1.78
PRE3YJL001W POM33Q12164 279 aa3.92□□□□□ -1.78
PRE3YJL001W ADH3P07246 375 aaKnown RBP3.91□□□□□ -1.78
PRE3YJL001W NHP6AP11632 93 aaKnown RBP3.91□□□□□ -1.78
PRE3YJL001W YKR032WP36127 104 aa3.91□□□□□ -1.78
PRE3YJL001W SDS23P53172 527 aa3.91□□□□□ -1.78
PRE3YJL001W APS2Q00381 147 aa3.91□□□□□ -1.78
PRE3YJL001W RPL31AP0C2H8 113 aaKnown RBP3.9□□□□□ -1.79
PRE3YJL001W AIM19P40502 157 aa3.9□□□□□ -1.79
PRE3YJL001W YGL088WP53151 121 aa3.9□□□□□ -1.79
PRE3YJL001W MHR1Q06630 226 aa3.9□□□□□ -1.79
PRE3YJL001W YLR118CQ12354 227 aa3.9□□□□□ -1.79
PRE3YJL001W YBR209WP38311 105 aa3.89□□□□□ -1.79
PRE3YJL001W YIA6P40556 373 aa3.89□□□□□ -1.79
PRE3YJL001W VMA21P41806 77 aa3.89□□□□□ -1.79
PRE3YJL001W TIM11P81449 96 aaPredicted RBP3.89□□□□□ -1.79
PRE3YJL001W YBL112CQ3E7Y4 105 aa3.89□□□□□ -1.79
PRE3YJL001W YBR219CP38317 127 aa3.88□□□□□ -1.79
PRE3YJL001W PET8P38921 284 aa3.88□□□□□ -1.79
PRE3YJL001W SEC72P39742 193 aaKnown RBP3.88□□□□□ -1.79
PRE3YJL001W YER076CP40049 302 aa3.88□□□□□ -1.79
PRE3YJL001W OST3P48439 350 aa3.88□□□□□ -1.79
PRE3YJL001W ENV10Q99382 181 aa3.88□□□□□ -1.79
PRE3YJL001W ATG8P38182 117 aaRIP-Chip data3.87□□□□□ -1.79not detected
PRE3YJL001W YER085CP40058 173 aa3.87□□□□□ -1.79
PRE3YJL001W PAU15P40585 124 aa3.87□□□□□ -1.79
PRE3YJL001W FSF1Q12029 327 aaKnown RBP3.87□□□□□ -1.79
PRE3YJL001W HYP2P23301 157 aaKnown RBP3.85□□□□□ -1.79
PRE3YJL001W CNB1P25296 175 aa3.85□□□□□ -1.79
PRE3YJL001W AIM29P36154 155 aa3.85□□□□□ -1.79
PRE3YJL001W YJR146WP47174 117 aa3.85□□□□□ -1.79
PRE3YJL001W DAN1P47178 298 aa3.85□□□□□ -1.79
PRE3YJL001W SEC4P07560 215 aaKnown RBP3.84□□□□□ -1.79
PRE3YJL001W YKR070WP36151 352 aaKnown RBP3.84□□□□□ -1.79
PRE3YJL001W WIP1Q2V2P8 89 aa3.84□□□□□ -1.79
PRE3YJL001W YMR175W-AQ3E766 64 aa3.84□□□□□ -1.79
PRE3YJL001W ECM12O13529 151 aa3.83□□□□□ -1.8
PRE3YJL001W PFY1P07274 126 aa3.83□□□□□ -1.8
PRE3YJL001W SPT4P32914 102 aaPredicted RBP3.83□□□□□ -1.8
PRE3YJL001W YEL008WP40001 126 aa3.83□□□□□ -1.8
PRE3YJL001W YPR014CQ6B0W2 109 aa3.83□□□□□ -1.8
PRE3YJL001W PRE1P22141 198 aaKnown RBP3.82□□□□□ -1.8
PRE3YJL001W VTC1P40046 129 aaRIP-Chip data3.82□□□□□ -1.8not detected
PRE3YJL001W MGR2Q02889 113 aa3.82□□□□□ -1.8
PRE3YJL001W RPS22BQ3E7Y3 130 aaKnown RBP3.82□□□□□ -1.8
PRE3YJL001W POR1P04840 283 aaKnown RBP3.81□□□□□ -1.8
PRE3YJL001W YAR029WP39549 74 aa3.81□□□□□ -1.8
PRE3YJL001W YAR1P46683 200 aa3.81□□□□□ -1.8
PRE3YJL001W YIL014C-AQ02598 104 aa3.81□□□□□ -1.8
PRE3YJL001W PAU19P0CE85 124 aa3.8□□□□□ -1.8
PRE3YJL001W PAU21P0CE86 164 aa3.8□□□□□ -1.8
PRE3YJL001W PAU22P0CE87 164 aa3.8□□□□□ -1.8
PRE3YJL001W PAU3P25610 124 aa3.8□□□□□ -1.8
PRE3YJL001W NSE4P43124 402 aa3.8□□□□□ -1.8
PRE3YJL001W YGL041C-BQ3E750 60 aa3.8□□□□□ -1.8
PRE3YJL001W YOR008C-AQ3E7B9 74 aa3.8□□□□□ -1.8
PRE3YJL001W YAL065CO13511 128 aa3.79□□□□□ -1.8
PRE3YJL001W TOS6P48560 102 aa3.79□□□□□ -1.8
PRE3YJL001W YMR295CQ03559 197 aa3.79□□□□□ -1.8
PRE3YJL001W YGL149WP53116 101 aa3.78□□□□□ -1.8
PRE3YJL001W HHO1P53551 258 aa3.78□□□□□ -1.8
PRE3YJL001W PKR1Q03880 122 aaKnown RBP3.78□□□□□ -1.8
PRE3YJL001W CWP2P43497 92 aa3.77□□□□□ -1.81
PRE3YJL001W CYT2Q00873 224 aa3.76□□□□□ -1.81
PRE3YJL001W YDL241WQ07738 123 aa3.76□□□□□ -1.81
PRE3YJL001W ADH1P00330 348 aaKnown RBP3.75□□□□□ -1.81
PRE3YJL001W HMRA2P0CY13 119 aa3.75□□□□□ -1.81
PRE3YJL001W APS1P35181 156 aa3.75□□□□□ -1.81
PRE3YJL001W YGL118CP53132 145 aa3.75□□□□□ -1.81
PRE3YJL001W ERV14P53173 138 aa3.75□□□□□ -1.81
PRE3YJL001W ZEO1Q08245 113 aa3.75□□□□□ -1.81
PRE3YJL001W COA3Q3E7B2 85 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms