RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	YER084W	P40057	128 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	YFL065C	P43539	102 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	YLR296W	Q05898	108 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	YPR203W	Q08994	102 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	ATG41	Q12048	136 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	SLH1	P53327	1967 aa	Known RBP	2.5	□□□□□ -2.01
TMA108	YIL137C	YEL045C	P32616	141 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	CMC4	Q3E7A9	73 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	COA6	Q3E846	104 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	YIL086C	P40503	102 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	SPG1	P50088	95 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	YMR082C	Q04276	118 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	FIT1	Q04433	528 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	YMR230W-A	Q3E7B5	62 aa		2.5	□□□□□ -2.01
TMA108	YIL137C	DAD4	P69851	72 aa		2.49	□□□□□ -2.01
TMA108	YIL137C	PAU21	P0CE86	164 aa		2.49	□□□□□ -2.01
TMA108	YIL137C	PAU22	P0CE87	164 aa		2.49	□□□□□ -2.01
TMA108	YIL137C	CYB5	P40312	120 aa		2.49	□□□□□ -2.01
TMA108	YIL137C	CYR1	P08678	2026 aa	Known RBP	2.48	□□□□□ -2.01
TMA108	YIL137C	RTC6	O14464	93 aa		2.48	□□□□□ -2.01
TMA108	YIL137C	YFL051C	P43552	160 aa		2.48	□□□□□ -2.01
TMA108	YIL137C	YGR164W	P53291	111 aa		2.48	□□□□□ -2.01
TMA108	YIL137C	MRPS16	Q02608	121 aa		2.48	□□□□□ -2.01
TMA108	YIL137C	HFA1	P32874	2273 aa		2.48	□□□□□ -2.01
TMA108	YIL137C	IRA2	P19158	3079 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	ATG8	P38182	117 aa	RIP-Chip data	2.47	□□□□□ -2.01	not detected
TMA108	YIL137C	HSP10	P38910	106 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	YLR236C	A0A023PZG4	107 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	YPR096C	O13587	100 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	RPS23A	P0CX29	145 aa	Known RBP	2.47	□□□□□ -2.01
TMA108	YIL137C	RPS23B	P0CX30	145 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	FUN14	P18411	198 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	ECM34	P38728	170 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	YEL067C	P39978	195 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	PAU5	P43575	122 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	POP3	P53833	195 aa	Predicted RBP	2.47	□□□□□ -2.01
TMA108	YIL137C	IGO1	P53897	168 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	ELP6	Q04868	273 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	YPL261C	Q08976	102 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	DAD1	Q12248	94 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	PCC1	Q3E833	88 aa		2.47	□□□□□ -2.01
TMA108	YIL137C	DAN1	P47178	298 aa		2.46	□□□□□ -2.01
TMA108	YIL137C	YNL162W-A	Q3E7A8	72 aa		2.46	□□□□□ -2.01
TMA108	YIL137C	CSF1	Q12150	2958 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	MRPS9	P38120	278 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	YLR194C	Q05777	254 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	PPT2	Q12036	173 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	YHL018W	P38744	120 aa	Predicted RBP	2.46	□□□□□ -2.02
TMA108	YIL137C	DCV1	P43595	202 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	GRX5	Q02784	150 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	NMA1	Q06178	401 aa	Known RBP	2.46	□□□□□ -2.02
TMA108	YIL137C	YPR013C	Q12145	317 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	YKL018C-A	Q3E7A7	99 aa		2.46	□□□□□ -2.02
TMA108	YIL137C	YBR056W-A	I2HB52	66 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	RPS22A	P0C0W1	130 aa	Known RBP	2.45	□□□□□ -2.02
TMA108	YIL137C	HMRA2	P0CY13	119 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	RPS27A	P35997	82 aa	Known RBP	2.45	□□□□□ -2.02
TMA108	YIL137C	YBR013C	P38215	129 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	RPS27B	P38711	82 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	YER187W	P40102	141 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	YML122C	Q03207	126 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	YFR010W-A	P0C5N0	62 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	KRE1	P17260	313 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	PAU16	P35994	123 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	YGR269W	P40326	108 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	PAU15	P40585	124 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	YJR146W	P47174	117 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	YHR213W-A	Q8TGT4	77 aa		2.45	□□□□□ -2.02
TMA108	YIL137C	GCV3	P39726	170 aa	Predicted RBP	2.44	□□□□□ -2.02
TMA108	YIL137C	MHF1	Q3E835	90 aa		2.44	□□□□□ -2.02
TMA108	YIL137C	COX23	P38824	151 aa		2.44	□□□□□ -2.02
TMA108	YIL137C	YDR042C	Q03205	200 aa		2.44	□□□□□ -2.02
TMA108	YIL137C	POC4	Q12245	148 aa	Predicted RBP	2.44	□□□□□ -2.02
TMA108	YIL137C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.44	□□□□□ -2.02
TMA108	YIL137C	SNN1	P48232	102 aa		2.43	□□□□□ -2.02
TMA108	YIL137C	ATP19	P81451	68 aa		2.43	□□□□□ -2.02
TMA108	YIL137C	SEC11	P15367	167 aa		2.43	□□□□□ -2.02
TMA108	YIL137C	MET31	Q03081	177 aa		2.43	□□□□□ -2.02
TMA108	YIL137C	EMC6	Q12431	108 aa		2.43	□□□□□ -2.02
TMA108	YIL137C	YPR145C-A	Q2V2P0	78 aa		2.43	□□□□□ -2.02
TMA108	YIL137C	IRA1	P18963	3092 aa		2.42	□□□□□ -2.02
TMA108	YIL137C	RPL33B	P41056	107 aa	Known RBP	2.42	□□□□□ -2.02
TMA108	YIL137C	YML079W	Q03629	201 aa		2.42	□□□□□ -2.02
TMA108	YIL137C	YOL131W	Q08270	108 aa		2.42	□□□□□ -2.02
TMA108	YIL137C	SUS1	Q6WNK7	96 aa		2.42	□□□□□ -2.02
TMA108	YIL137C	RPL26A	P05743	127 aa	Known RBP	2.41	□□□□□ -2.02
TMA108	YIL137C	YCR085W	P25650	117 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	YKR032W	P36127	104 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	YKR045C	P36138	183 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	LST8	P41318	303 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	YPI1	P43587	155 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	RPL26B	P53221	127 aa	Known RBP	2.41	□□□□□ -2.02
TMA108	YIL137C	YPR195C	Q06594	109 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	COX8	P04039	78 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	RPA12	P32529	125 aa	Known RBP	2.41	□□□□□ -2.02
TMA108	YIL137C	HUR1	P45820	110 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	YOR032W-A	Q8TGS1	66 aa		2.41	□□□□□ -2.02
TMA108	YIL137C	GCN1	P33892	2672 aa	Known RBP	2.41	□□□□□ -2.02
TMA108	YIL137C	PRP8	P33334	2413 aa	Known RBP	2.41	□□□□□ -2.02
TMA108	YIL137C	YHR213W	P0CI67	198 aa		2.41	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms