RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W VHS2P40463 436 aa5.78□□□□□ -1.48
PEX28YHR150W URM1P40554 99 aaPredicted RBP5.78□□□□□ -1.48
PEX28YHR150W CAX4P53223 239 aa5.78□□□□□ -1.48
PEX28YHR150W AIM11P87275 137 aa5.78□□□□□ -1.48
PEX28YHR150W RRG8Q06109 277 aa5.78□□□□□ -1.48
PEX28YHR150W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PEX28YHR150W CCW12Q12127 133 aa5.78□□□□□ -1.48
PEX28YHR150W YCL042WP25572 119 aa5.77□□□□□ -1.49
PEX28YHR150W YPT53P36019 220 aa5.77□□□□□ -1.49
PEX28YHR150W VTC1P40046 129 aaRIP-Chip data5.77□□□□□ -1.49not detected
PEX28YHR150W DCV1P43595 202 aa5.77□□□□□ -1.49
PEX28YHR150W YER145C-AA0A023PYF4 145 aa5.77□□□□□ -1.49
PEX28YHR150W ATP15P21306 62 aa5.77□□□□□ -1.49
PEX28YHR150W YNL194CP40169 301 aa5.77□□□□□ -1.49
PEX28YHR150W IGO2Q9P305 131 aa5.77□□□□□ -1.49
PEX28YHR150W VAR1P02381 398 aa5.76□□□□□ -1.49
PEX28YHR150W YER135CP40082 130 aa5.76□□□□□ -1.49
PEX28YHR150W YOR097CQ12274 175 aaPredicted RBP5.76□□□□□ -1.49
PEX28YHR150W YNL146C-AQ3E7Z1 64 aa5.76□□□□□ -1.49
PEX28YHR150W CYC7P00045 113 aa5.75□□□□□ -1.49
PEX28YHR150W RPL16BP26785 198 aaKnown RBP5.75□□□□□ -1.49
PEX28YHR150W CIN5P40917 295 aa5.75□□□□□ -1.49
PEX28YHR150W Q0255P03881 472 aa5.74□□□□□ -1.49
PEX28YHR150W RPS8AP0CX39 200 aaKnown RBP5.74□□□□□ -1.49
PEX28YHR150W RPS8BP0CX40 200 aaKnown RBP5.74□□□□□ -1.49
PEX28YHR150W NHP2P32495 156 aaPredicted RBP5.74□□□□□ -1.49
PEX28YHR150W YER085CP40058 173 aa5.74□□□□□ -1.49
PEX28YHR150W PRM3Q08931 133 aa5.74□□□□□ -1.49
PEX28YHR150W CCW14O13547 238 aa5.74□□□□□ -1.49
PEX28YHR150W RPL15AP05748 204 aaKnown RBP5.74□□□□□ -1.49
PEX28YHR150W YNL217WP40152 326 aa5.74□□□□□ -1.49
PEX28YHR150W YLR194CQ05777 254 aa5.74□□□□□ -1.49
PEX28YHR150W RPL16AP26784 199 aaKnown RBP5.73□□□□□ -1.49
PEX28YHR150W SIM1P40472 476 aa5.73□□□□□ -1.49
PEX28YHR150W YJR146WP47174 117 aa5.73□□□□□ -1.49
PEX28YHR150W MET32Q12041 191 aa5.73□□□□□ -1.49
PEX28YHR150W MID2P36027 376 aa5.72□□□□□ -1.49
PEX28YHR150W POP7P38291 140 aa5.72□□□□□ -1.49
PEX28YHR150W YDL186WP48568 277 aa5.72□□□□□ -1.49
PEX28YHR150W LSM6Q06406 86 aaKnown RBP5.72□□□□□ -1.49
PEX28YHR150W YLR042CQ07990 161 aa5.72□□□□□ -1.49
PEX28YHR150W MIG3P39943 394 aa5.71□□□□□ -1.49
PEX28YHR150W RPL28P02406 149 aaKnown RBP5.71□□□□□ -1.5
PEX28YHR150W YMR244WQ04018 355 aa5.71□□□□□ -1.5
PEX28YHR150W MRPL23Q12487 163 aaPredicted RBP5.71□□□□□ -1.5
PEX28YHR150W YBR209WP38311 105 aa5.7□□□□□ -1.5
PEX28YHR150W ATX1P38636 73 aa5.7□□□□□ -1.5
PEX28YHR150W OST2P46964 130 aa5.7□□□□□ -1.5
PEX28YHR150W YGL088WP53151 121 aa5.7□□□□□ -1.5
PEX28YHR150W RPL18AP0CX49 186 aaKnown RBP5.69□□□□□ -1.5
PEX28YHR150W RPL18BP0CX50 186 aaKnown RBP5.69□□□□□ -1.5
PEX28YHR150W YFR035CP43608 114 aa5.69□□□□□ -1.5
PEX28YHR150W FIP1P45976 327 aa5.69□□□□□ -1.5
PEX28YHR150W YNL190WP53872 204 aa5.69□□□□□ -1.5
PEX28YHR150W HPA2Q06592 156 aa5.69□□□□□ -1.5
PEX28YHR150W RRT13P40042 185 aa5.68□□□□□ -1.5
PEX28YHR150W MRPS12P53732 153 aa5.68□□□□□ -1.5
PEX28YHR150W MRPS8Q03799 155 aa5.68□□□□□ -1.5
PEX28YHR150W INO4P13902 151 aa5.67□□□□□ -1.5
PEX28YHR150W DUT1P33317 147 aa5.67□□□□□ -1.5
PEX28YHR150W TAR1Q8TGM6 124 aa5.67□□□□□ -1.5
PEX28YHR150W TRP1P00912 224 aa5.66□□□□□ -1.5
PEX28YHR150W YHR212W-AP0CX91 67 aa5.66□□□□□ -1.5
PEX28YHR150W UGX2P32772 223 aa5.66□□□□□ -1.5
PEX28YHR150W ALG13P53178 202 aa5.66□□□□□ -1.5
PEX28YHR150W PEX17P40155 199 aa5.65□□□□□ -1.5
PEX28YHR150W ISD11Q6Q560 94 aa5.65□□□□□ -1.5
PEX28YHR150W SHU1P38751 150 aa5.65□□□□□ -1.51
PEX28YHR150W YEL008WP40001 126 aa5.64□□□□□ -1.51
PEX28YHR150W RPA12P32529 125 aaKnown RBP5.63□□□□□ -1.51
PEX28YHR150W YIL059CP40520 121 aa5.63□□□□□ -1.51
PEX28YHR150W YCL021W-AQ96VH3 125 aa5.63□□□□□ -1.51
PEX28YHR150W YGR035W-AQ45U48 73 aa5.62□□□□□ -1.51
PEX28YHR150W DSE2P38844 325 aa5.62□□□□□ -1.51
PEX28YHR150W YBR144CP34215 104 aa5.61□□□□□ -1.51
PEX28YHR150W YCH1P42937 148 aa5.61□□□□□ -1.51
PEX28YHR150W NUM1Q00402 2748 aa5.61□□□□□ -1.51
PEX28YHR150W MPC2P38857 129 aa5.6□□□□□ -1.51
PEX28YHR150W YIA6P40556 373 aa5.6□□□□□ -1.51
PEX28YHR150W YFL065CP43539 102 aa5.6□□□□□ -1.51
PEX28YHR150W PMP3P87284 55 aa5.6□□□□□ -1.51
PEX28YHR150W ABF2Q02486 183 aa5.6□□□□□ -1.51
PEX28YHR150W YPR203WQ08994 102 aa5.6□□□□□ -1.51
PEX28YHR150W YKL069WP36088 180 aa5.6□□□□□ -1.51
PEX28YHR150W QCR8P08525 94 aa5.58□□□□□ -1.52
PEX28YHR150W RPL2AP0CX45 254 aaKnown RBP5.58□□□□□ -1.52
PEX28YHR150W RPL2BP0CX46 254 aaKnown RBP5.58□□□□□ -1.52
PEX28YHR150W RPS11AP0CX47 156 aaKnown RBP5.58□□□□□ -1.52
PEX28YHR150W RPS11BP0CX48 156 aaKnown RBP5.58□□□□□ -1.52
PEX28YHR150W UBC5P15732 148 aa5.58□□□□□ -1.52
PEX28YHR150W COX10P21592 462 aa5.58□□□□□ -1.52
PEX28YHR150W NRG2P38082 220 aa5.58□□□□□ -1.52
PEX28YHR150W YHR130CP38834 111 aa5.58□□□□□ -1.52
PEX28YHR150W EOS1P53938 366 aa5.58□□□□□ -1.52
PEX28YHR150W YNL184CP53876 108 aa5.57□□□□□ -1.52
PEX28YHR150W YMR295CQ03559 197 aa5.57□□□□□ -1.52
PEX28YHR150W YPS5P53057 165 aa5.56□□□□□ -1.52
PEX28YHR150W YCR075W-AQ3E830 75 aa5.56□□□□□ -1.52
PEX28YHR150W KRE9P39005 276 aa5.55□□□□□ -1.52
PEX28YHR150W ARC15P40518 154 aaRIP-Chip data5.54□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms