RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C PFY1P07274 126 aa4.51□□□□□ -1.69
SFB3YHR098C KTI12P34253 313 aaKnown RBP4.51□□□□□ -1.69
SFB3YHR098C YMR181CQ03231 154 aa4.51□□□□□ -1.69
SFB3YHR098C PRM7Q12459 698 aa4.51□□□□□ -1.69
SFB3YHR098C YPL038W-AQ3E7B4 63 aa4.51□□□□□ -1.69
SFB3YHR098C YER145C-AA0A023PYF4 145 aa4.5□□□□□ -1.69
SFB3YHR098C YCR050CP25630 102 aa4.5□□□□□ -1.69
SFB3YHR098C REE1P40893 198 aa4.5□□□□□ -1.69
SFB3YHR098C AIM11P87275 137 aa4.5□□□□□ -1.69
SFB3YHR098C PBI2P0CT04 75 aaKnown RBP4.5□□□□□ -1.69
SFB3YHR098C TOM6P33448 61 aa4.5□□□□□ -1.69
SFB3YHR098C YDR381C-AQ3E6R5 114 aa4.5□□□□□ -1.69
SFB3YHR098C GON7P46984 123 aa4.49□□□□□ -1.69
SFB3YHR098C PGU1P47180 361 aa4.49□□□□□ -1.69
SFB3YHR098C YLR194CQ05777 254 aa4.49□□□□□ -1.69
SFB3YHR098C IRC23Q08416 157 aa4.49□□□□□ -1.69
SFB3YHR098C YFL015CP43578 164 aa4.49□□□□□ -1.69
SFB3YHR098C YNL190WP53872 204 aa4.49□□□□□ -1.69
SFB3YHR098C TOS6P48560 102 aa4.48□□□□□ -1.69
SFB3YHR098C YKR073CP36153 106 aa4.48□□□□□ -1.69
SFB3YHR098C YDR209CQ03480 137 aa4.48□□□□□ -1.69
SFB3YHR098C AIM19P40502 157 aa4.48□□□□□ -1.69
SFB3YHR098C YLR042CQ07990 161 aa4.48□□□□□ -1.69
SFB3YHR098C VPS13Q07878 3144 aa4.47□□□□□ -1.69
SFB3YHR098C RPL28P02406 149 aaKnown RBP4.47□□□□□ -1.69
SFB3YHR098C RPL42AP0CX27 106 aaKnown RBP4.47□□□□□ -1.69
SFB3YHR098C RPL42BP0CX28 106 aaKnown RBP4.47□□□□□ -1.69
SFB3YHR098C YHR214C-DP0CX93 97 aa4.47□□□□□ -1.69
SFB3YHR098C YHL018WP38744 120 aaPredicted RBP4.47□□□□□ -1.69
SFB3YHR098C SDC1Q03323 175 aa4.47□□□□□ -1.69
SFB3YHR098C DAP1Q12091 152 aa4.47□□□□□ -1.69
SFB3YHR098C GLE2P40066 365 aa4.47□□□□□ -1.69
SFB3YHR098C PBA1Q05778 276 aa4.47□□□□□ -1.69
SFB3YHR098C RRS1Q08746 203 aaKnown RBP4.47□□□□□ -1.69
SFB3YHR098C FAS1P07149 2051 aaKnown RBP4.46□□□□□ -1.69
SFB3YHR098C YHR213WP0CI67 198 aa4.46□□□□□ -1.7
SFB3YHR098C SPI1P40092 148 aa4.46□□□□□ -1.7
SFB3YHR098C YIL086CP40503 102 aa4.46□□□□□ -1.7
SFB3YHR098C ATP15P21306 62 aa4.46□□□□□ -1.7
SFB3YHR098C IES6P32617 166 aa4.46□□□□□ -1.7
SFB3YHR098C YLR342W-AQ3E810 57 aa4.46□□□□□ -1.7
SFB3YHR098C RRT13P40042 185 aa4.45□□□□□ -1.7
SFB3YHR098C IMP2P46972 177 aa4.45□□□□□ -1.7
SFB3YHR098C SVP26P38869 228 aa4.45□□□□□ -1.7
SFB3YHR098C RPS14AP06367 137 aaKnown RBP4.44□□□□□ -1.7
SFB3YHR098C YMR320WQ04897 101 aa4.44□□□□□ -1.7
SFB3YHR098C GAT3Q07928 141 aa4.44□□□□□ -1.7
SFB3YHR098C YIL046W-AQ3E7Z4 54 aa4.44□□□□□ -1.7
SFB3YHR098C YRA2P36036 203 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SFB3YHR098C TRP1P00912 224 aa4.43□□□□□ -1.7
SFB3YHR098C MRPS12P53732 153 aa4.43□□□□□ -1.7
SFB3YHR098C SHH4Q06236 168 aa4.43□□□□□ -1.7
SFB3YHR098C LDB16P25587 256 aa4.43□□□□□ -1.7
SFB3YHR098C YBR209WP38311 105 aa4.43□□□□□ -1.7
SFB3YHR098C YKR045CP36138 183 aa4.42□□□□□ -1.7
SFB3YHR098C MTC6P38849 526 aa4.42□□□□□ -1.7
SFB3YHR098C YSY6P38374 65 aa4.42□□□□□ -1.7
SFB3YHR098C YER084WP40057 128 aa4.42□□□□□ -1.7
SFB3YHR098C NRM1P53718 249 aa4.42□□□□□ -1.7
SFB3YHR098C YMR175W-AQ3E766 64 aa4.42□□□□□ -1.7
SFB3YHR098C YOR008C-AQ3E7B9 74 aa4.42□□□□□ -1.7
SFB3YHR098C KTI11Q3E840 82 aa4.42□□□□□ -1.7
SFB3YHR098C TOS8P53147 276 aa4.42□□□□□ -1.7
SFB3YHR098C EMC6Q12431 108 aa4.42□□□□□ -1.7
SFB3YHR098C KSH1Q8TGJ3 72 aa4.42□□□□□ -1.7
SFB3YHR098C RPS14BP39516 138 aaKnown RBP4.41□□□□□ -1.7
SFB3YHR098C PIR5P46999 287 aa4.41□□□□□ -1.7
SFB3YHR098C MPC2P38857 129 aa4.41□□□□□ -1.7
SFB3YHR098C YER187WP40102 141 aa4.41□□□□□ -1.7
SFB3YHR098C RRT1P38192 103 aa4.4□□□□□ -1.71
SFB3YHR098C PBP4Q07362 185 aaKnown RBP4.4□□□□□ -1.71
SFB3YHR098C YDL009CQ12210 107 aa4.4□□□□□ -1.71
SFB3YHR098C YJL027CP47063 138 aaPredicted RBP4.39□□□□□ -1.71
SFB3YHR098C PPT2Q12036 173 aa4.39□□□□□ -1.71
SFB3YHR098C BET1P22804 142 aa4.39□□□□□ -1.71
SFB3YHR098C HUR1P45820 110 aa4.39□□□□□ -1.71
SFB3YHR098C DCV1P43595 202 aa4.38□□□□□ -1.71
SFB3YHR098C RPL15AP05748 204 aaKnown RBP4.38□□□□□ -1.71
SFB3YHR098C RPL16BP26785 198 aaKnown RBP4.38□□□□□ -1.71
SFB3YHR098C MSA2P36157 363 aa4.38□□□□□ -1.71
SFB3YHR098C YLR412C-AQ3E742 68 aa4.38□□□□□ -1.71
SFB3YHR098C YLR281CQ05863 155 aa4.37□□□□□ -1.71
SFB3YHR098C CCW14O13547 238 aa4.37□□□□□ -1.71
SFB3YHR098C YOL160WQ08321 113 aa4.37□□□□□ -1.71
SFB3YHR098C YDR246W-AQ3E763 66 aa4.37□□□□□ -1.71
SFB3YHR098C KRE9P39005 276 aa4.36□□□□□ -1.71
SFB3YHR098C YGR025WP53216 100 aa4.36□□□□□ -1.71
SFB3YHR098C YML122CQ03207 126 aa4.36□□□□□ -1.71
SFB3YHR098C YOR034C-AQ3E735 80 aa4.36□□□□□ -1.71
SFB3YHR098C YMR105W-AQ8TGS8 64 aa4.36□□□□□ -1.71
SFB3YHR098C IRA2P19158 3079 aa4.36□□□□□ -1.71
SFB3YHR098C RPL16AP26784 199 aaKnown RBP4.36□□□□□ -1.71
SFB3YHR098C SFT1P43682 97 aa4.36□□□□□ -1.71
SFB3YHR098C YLR285C-AQ3E771 56 aa4.36□□□□□ -1.71
SFB3YHR098C SEN1Q00416 2231 aaKnown RBP4.36□□□□□ -1.71
SFB3YHR098C FAB1P34756 2278 aa4.36□□□□□ -1.71
SFB3YHR098C RPL39P04650 51 aa4.35□□□□□ -1.71
SFB3YHR098C MRPL39P36533 70 aa4.35□□□□□ -1.71
SFB3YHR098C PEX17P40155 199 aa4.35□□□□□ -1.71
SFB3YHR098C YJR146WP47174 117 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms