RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C YKL023C-AQ2V2P3 75 aa2.23□□□□□ -2.05
NMD2YHR077C ADH2P00331 348 aaKnown RBP2.22□□□□□ -2.05
NMD2YHR077C MRP49P32388 137 aa2.22□□□□□ -2.05
NMD2YHR077C YKR041WP36134 250 aa2.22□□□□□ -2.05
NMD2YHR077C DCV1P43595 202 aa2.22□□□□□ -2.05
NMD2YHR077C AIM11P87275 137 aa2.22□□□□□ -2.05
NMD2YHR077C YLR042CQ07990 161 aa2.22□□□□□ -2.05
NMD2YHR077C YLR363W-AQ3E747 85 aa2.22□□□□□ -2.05
NMD2YHR077C HTL1Q9URQ5 78 aa2.22□□□□□ -2.05
NMD2YHR077C RPS8AP0CX39 200 aaKnown RBP2.22□□□□□ -2.05
NMD2YHR077C RPS8BP0CX40 200 aaKnown RBP2.22□□□□□ -2.05
NMD2YHR077C YHR212W-AP0CX91 67 aa2.22□□□□□ -2.05
NMD2YHR077C PRY2P36110 329 aa2.22□□□□□ -2.05
NMD2YHR077C AIM34Q03673 198 aa2.22□□□□□ -2.05
NMD2YHR077C RPL42AP0CX27 106 aaKnown RBP2.22□□□□□ -2.05
NMD2YHR077C RPL42BP0CX28 106 aaKnown RBP2.22□□□□□ -2.05
NMD2YHR077C CPR1P14832 162 aaKnown RBP2.22□□□□□ -2.05
NMD2YHR077C CIN5P40917 295 aa2.21□□□□□ -2.06
NMD2YHR077C YIL102C-AQ2V2P5 75 aa2.21□□□□□ -2.06
NMD2YHR077C UBC5P15732 148 aa2.21□□□□□ -2.06
NMD2YHR077C YLR194CQ05777 254 aa2.21□□□□□ -2.06
NMD2YHR077C PRM3Q08931 133 aa2.21□□□□□ -2.06
NMD2YHR077C ATP15P21306 62 aa2.2□□□□□ -2.06
NMD2YHR077C YPL261CQ08976 102 aa2.2□□□□□ -2.06
NMD2YHR077C CDC43P18898 376 aa2.2□□□□□ -2.06
NMD2YHR077C YBR219CP38317 127 aa2.2□□□□□ -2.06
NMD2YHR077C KRE9P39005 276 aa2.2□□□□□ -2.06
NMD2YHR077C AGE2P40529 298 aa2.2□□□□□ -2.06
NMD2YHR077C YOR008C-AQ3E7B9 74 aa2.2□□□□□ -2.06
NMD2YHR077C Q0255P03881 472 aa2.2□□□□□ -2.06
NMD2YHR077C OXA1P39952 402 aa2.2□□□□□ -2.06
NMD2YHR077C TRP1P00912 224 aa2.19□□□□□ -2.06
NMD2YHR077C RPS11AP0CX47 156 aaKnown RBP2.19□□□□□ -2.06
NMD2YHR077C RPS11BP0CX48 156 aaKnown RBP2.19□□□□□ -2.06
NMD2YHR077C RPF1P38805 295 aaKnown RBP2.19□□□□□ -2.06
NMD2YHR077C YEL008WP40001 126 aa2.19□□□□□ -2.06
NMD2YHR077C YOR097CQ12274 175 aaPredicted RBP2.19□□□□□ -2.06
NMD2YHR077C ELF1P36053 145 aa2.19□□□□□ -2.06
NMD2YHR077C YNL190WP53872 204 aa2.19□□□□□ -2.06
NMD2YHR077C CCW14O13547 238 aa2.18□□□□□ -2.06
NMD2YHR077C RPL32P38061 130 aaKnown RBP2.18□□□□□ -2.06
NMD2YHR077C MPC2P38857 129 aa2.18□□□□□ -2.06
NMD2YHR077C URM1P40554 99 aaPredicted RBP2.18□□□□□ -2.06
NMD2YHR077C CWC27Q02770 301 aa2.18□□□□□ -2.06
NMD2YHR077C CYC7P00045 113 aa2.18□□□□□ -2.06
NMD2YHR077C YCH1P42937 148 aa2.18□□□□□ -2.06
NMD2YHR077C KEG1P43614 200 aa2.18□□□□□ -2.06
NMD2YHR077C RPL2AP0CX45 254 aaKnown RBP2.17□□□□□ -2.06
NMD2YHR077C RPL2BP0CX46 254 aaKnown RBP2.17□□□□□ -2.06
NMD2YHR077C YDR274CP87283 123 aa2.17□□□□□ -2.06
NMD2YHR077C IGO2Q9P305 131 aa2.17□□□□□ -2.06
NMD2YHR077C UGX2P32772 223 aa2.17□□□□□ -2.06
NMD2YHR077C NRG2P38082 220 aa2.17□□□□□ -2.06
NMD2YHR077C YER085CP40058 173 aa2.17□□□□□ -2.06
NMD2YHR077C YNL217WP40152 326 aa2.17□□□□□ -2.06
NMD2YHR077C YPS5P53057 165 aa2.17□□□□□ -2.06
NMD2YHR077C YGL088WP53151 121 aa2.17□□□□□ -2.06
NMD2YHR077C ALG13P53178 202 aa2.17□□□□□ -2.06
NMD2YHR077C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
NMD2YHR077C ELC1Q03071 99 aa2.16□□□□□ -2.06
NMD2YHR077C YMR295CQ03559 197 aa2.16□□□□□ -2.06
NMD2YHR077C RPL28P02406 149 aaKnown RBP2.16□□□□□ -2.06
NMD2YHR077C MID2P36027 376 aa2.16□□□□□ -2.06
NMD2YHR077C SHU1P38751 150 aa2.16□□□□□ -2.06
NMD2YHR077C RDS3Q06835 107 aaPredicted RBP2.16□□□□□ -2.06
NMD2YHR077C PAI3P01094 68 aa2.15□□□□□ -2.06
NMD2YHR077C HYP2P23301 157 aaKnown RBP2.15□□□□□ -2.06
NMD2YHR077C AUA1P32450 94 aa2.15□□□□□ -2.07
NMD2YHR077C YBR144CP34215 104 aa2.15□□□□□ -2.07
NMD2YHR077C LSM6Q06406 86 aaKnown RBP2.15□□□□□ -2.07
NMD2YHR077C YBR126W-AQ8TGU7 68 aa2.15□□□□□ -2.07
NMD2YHR077C YPT53P36019 220 aa2.15□□□□□ -2.07
NMD2YHR077C POP7P38291 140 aa2.15□□□□□ -2.07
NMD2YHR077C YER181CP40097 107 aa2.15□□□□□ -2.07
NMD2YHR077C ADH1P00330 348 aaKnown RBP2.14□□□□□ -2.07
NMD2YHR077C AIM29P36154 155 aa2.14□□□□□ -2.07
NMD2YHR077C COX14P39103 70 aa2.14□□□□□ -2.07
NMD2YHR077C PEX17P40155 199 aa2.14□□□□□ -2.07
NMD2YHR077C COX12Q01519 83 aa2.14□□□□□ -2.07
NMD2YHR077C YML079WQ03629 201 aa2.14□□□□□ -2.07
NMD2YHR077C YLL066W-BQ8TGJ7 56 aa2.14□□□□□ -2.07
NMD2YHR077C YAL065CO13511 128 aa2.14□□□□□ -2.07
NMD2YHR077C RPL18AP0CX49 186 aaKnown RBP2.13□□□□□ -2.07
NMD2YHR077C RPL18BP0CX50 186 aaKnown RBP2.13□□□□□ -2.07
NMD2YHR077C YBR209WP38311 105 aa2.13□□□□□ -2.07
NMD2YHR077C ARC15P40518 154 aaRIP-Chip data2.13□□□□□ -2.07not detected
NMD2YHR077C UBC11P52492 156 aa2.13□□□□□ -2.07
NMD2YHR077C RRG8Q06109 277 aa2.13□□□□□ -2.07
NMD2YHR077C YCR001WP25347 104 aa2.13□□□□□ -2.07
NMD2YHR077C YBL081WP38180 368 aaKnown RBP2.13□□□□□ -2.07
NMD2YHR077C YMR122W-AQ3E842 84 aa2.13□□□□□ -2.07
NMD2YHR077C HAL1Q01766 294 aa2.13□□□□□ -2.07
NMD2YHR077C VAM10Q08474 114 aa2.13□□□□□ -2.07
NMD2YHR077C YGR240C-AQ3E786 66 aa2.13□□□□□ -2.07
NMD2YHR077C ARO2P28777 376 aaKnown RBP2.12□□□□□ -2.07
NMD2YHR077C YIA6P40556 373 aa2.12□□□□□ -2.07
NMD2YHR077C COX10P21592 462 aa2.12□□□□□ -2.07
NMD2YHR077C TOA2P32774 122 aa2.12□□□□□ -2.07
NMD2YHR077C PMP3P87284 55 aa2.12□□□□□ -2.07
NMD2YHR077C YDR115WQ04598 105 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms