RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W YLR042CQ07990 161 aa1.28□□□□□ -2.2
SSF1YHR066W FCF2Q12035 217 aaPredicted RBP1.28□□□□□ -2.2
SSF1YHR066W YOR376W-AQ3E805 51 aa1.28□□□□□ -2.2
SSF1YHR066W BPH1P25356 2167 aa1.28□□□□□ -2.2
SSF1YHR066W QCR8P08525 94 aa1.27□□□□□ -2.21
SSF1YHR066W NMT1P14743 455 aa1.27□□□□□ -2.21
SSF1YHR066W SRL3P36167 246 aa1.27□□□□□ -2.21
SSF1YHR066W IPT1P38954 527 aa1.27□□□□□ -2.21
SSF1YHR066W RPL13BP40212 199 aaKnown RBP1.27□□□□□ -2.21
SSF1YHR066W MPC1P53157 130 aaKnown RBP1.27□□□□□ -2.21
SSF1YHR066W GPI11Q06636 219 aa1.27□□□□□ -2.21
SSF1YHR066W RPL13AQ12690 199 aaPredicted RBP1.27□□□□□ -2.21
SSF1YHR066W YNL146C-AQ3E7Z1 64 aa1.27□□□□□ -2.21
SSF1YHR066W ANB1P19211 157 aa1.26□□□□□ -2.21
SSF1YHR066W MRPL44P19956 98 aa1.26□□□□□ -2.21
SSF1YHR066W YGL010WP25338 174 aa1.26□□□□□ -2.21
SSF1YHR066W NAT5Q08689 176 aa1.26□□□□□ -2.21
SSF1YHR066W KTI11Q3E840 82 aa1.26□□□□□ -2.21
SSF1YHR066W YBR056W-AI2HB52 66 aa1.25□□□□□ -2.21
SSF1YHR066W YER039C-AP0CD97 72 aa1.25□□□□□ -2.21
SSF1YHR066W FUN14P18411 198 aa1.25□□□□□ -2.21
SSF1YHR066W SEC59P20048 519 aa1.25□□□□□ -2.21
SSF1YHR066W YAR029WP39549 74 aa1.25□□□□□ -2.21
SSF1YHR066W RGI1P40043 161 aaPredicted RBP1.25□□□□□ -2.21
SSF1YHR066W YFL065CP43539 102 aa1.25□□□□□ -2.21
SSF1YHR066W DCV1P43595 202 aa1.25□□□□□ -2.21
SSF1YHR066W YGL230CP53074 147 aa1.25□□□□□ -2.21
SSF1YHR066W YGL149WP53116 101 aa1.25□□□□□ -2.21
SSF1YHR066W ERV14P53173 138 aa1.25□□□□□ -2.21
SSF1YHR066W COA3Q3E7B2 85 aa1.25□□□□□ -2.21
SSF1YHR066W GSP1P32835 219 aaKnown RBP1.24□□□□□ -2.21
SSF1YHR066W ECM31P38122 312 aa1.24□□□□□ -2.21
SSF1YHR066W YBR242WP38331 238 aa1.24□□□□□ -2.21
SSF1YHR066W HSP10P38910 106 aa1.24□□□□□ -2.21
SSF1YHR066W SNF11P38956 169 aa1.24□□□□□ -2.21
SSF1YHR066W YFL051CP43552 160 aa1.24□□□□□ -2.21
SSF1YHR066W BRP1P53194 125 aa1.24□□□□□ -2.21
SSF1YHR066W YPL067CQ02754 198 aa1.24□□□□□ -2.21
SSF1YHR066W GTT2Q12390 233 aa1.24□□□□□ -2.21
SSF1YHR066W MHF1Q3E835 90 aa1.24□□□□□ -2.21
SSF1YHR066W PAU21P0CE86 164 aa1.23□□□□□ -2.21
SSF1YHR066W PAU22P0CE87 164 aa1.23□□□□□ -2.21
SSF1YHR066W YKL044WP36092 106 aa1.23□□□□□ -2.21
SSF1YHR066W PAM16P42949 149 aa1.23□□□□□ -2.21
SSF1YHR066W GPI19Q04082 140 aa1.23□□□□□ -2.21
SSF1YHR066W RTR2Q12378 196 aa1.23□□□□□ -2.21
SSF1YHR066W PRE1P22141 198 aaKnown RBP1.22□□□□□ -2.21
SSF1YHR066W YCR099CP25657 155 aa1.22□□□□□ -2.21
SSF1YHR066W ATG8P38182 117 aaRIP-Chip data1.22□□□□□ -2.21not detected
SSF1YHR066W YFR035CP43608 114 aa1.22□□□□□ -2.21
SSF1YHR066W RPS12P48589 143 aaKnown RBP1.22□□□□□ -2.21
SSF1YHR066W FYV7Q12247 151 aa1.22□□□□□ -2.21
SSF1YHR066W RTC6O14464 93 aa1.21□□□□□ -2.21
SSF1YHR066W YBR027CP38220 110 aa1.21□□□□□ -2.21
SSF1YHR066W TDA2P40045 126 aa1.21□□□□□ -2.21
SSF1YHR066W VAR1P02381 398 aa1.21□□□□□ -2.22
SSF1YHR066W HAP3P13434 144 aa1.21□□□□□ -2.22
SSF1YHR066W HYP2P23301 157 aaKnown RBP1.21□□□□□ -2.22
SSF1YHR066W YCR101CP25607 182 aa1.21□□□□□ -2.22
SSF1YHR066W MRPL11P36521 249 aaPredicted RBP1.21□□□□□ -2.22
SSF1YHR066W MRPL15P36523 253 aa1.21□□□□□ -2.22
SSF1YHR066W YPR203WQ08994 102 aa1.21□□□□□ -2.22
SSF1YHR066W MDN1Q12019 4910 aaKnown RBP1.2□□□□□ -2.22
SSF1YHR066W YGL014C-AP0C5N1 53 aa1.2□□□□□ -2.22
SSF1YHR066W AQY2P0CD90 149 aa1.2□□□□□ -2.22
SSF1YHR066W EMP24P32803 203 aaKnown RBP1.2□□□□□ -2.22
SSF1YHR066W UTP11P34247 250 aaPredicted RBP1.2□□□□□ -2.22
SSF1YHR066W YHR130CP38834 111 aa1.2□□□□□ -2.22
SSF1YHR066W PAU12P53343 120 aa1.2□□□□□ -2.22
SSF1YHR066W SED1Q01589 338 aa1.2□□□□□ -2.22
SSF1YHR066W FIT1Q04433 528 aa1.2□□□□□ -2.22
SSF1YHR066W VAM10Q08474 114 aa1.2□□□□□ -2.22
SSF1YHR066W YPL225WQ08971 146 aaKnown RBP1.2□□□□□ -2.22
SSF1YHR066W OCA6Q12454 224 aa1.2□□□□□ -2.22
SSF1YHR066W YHR213WP0CI67 198 aa1.19□□□□□ -2.22
SSF1YHR066W AIM18P38884 321 aa1.19□□□□□ -2.22
SSF1YHR066W LST8P41318 303 aa1.19□□□□□ -2.22
SSF1YHR066W SEN15Q04675 128 aa1.19□□□□□ -2.22
SSF1YHR066W MED11Q99278 115 aa1.19□□□□□ -2.22
SSF1YHR066W RPL36BO14455 100 aaKnown RBP1.18□□□□□ -2.22
SSF1YHR066W RPL33AP05744 107 aaKnown RBP1.18□□□□□ -2.22
SSF1YHR066W RPL36AP05745 100 aaPredicted RBP1.18□□□□□ -2.22
SSF1YHR066W YHR212W-AP0CX91 67 aa1.18□□□□□ -2.22
SSF1YHR066W GNA1P43577 159 aaPredicted RBP1.18□□□□□ -2.22
SSF1YHR066W YIL014C-AQ02598 104 aa1.18□□□□□ -2.22
SSF1YHR066W YMR122CQ03879 124 aa1.18□□□□□ -2.22
SSF1YHR066W YMR103CQ04436 120 aa1.18□□□□□ -2.22
SSF1YHR066W YLR296WQ05898 108 aa1.18□□□□□ -2.22
SSF1YHR066W YPL261CQ08976 102 aa1.18□□□□□ -2.22
SSF1YHR066W YLR365WQ7LIF2 110 aa1.18□□□□□ -2.22
SSF1YHR066W YBR090CP38253 122 aa1.17□□□□□ -2.22
SSF1YHR066W AIM4P38305 123 aaPredicted RBP1.17□□□□□ -2.22
SSF1YHR066W YHL037CP38733 133 aa1.17□□□□□ -2.22
SSF1YHR066W YEA6P39953 335 aa1.17□□□□□ -2.22
SSF1YHR066W YGR164WP53291 111 aa1.17□□□□□ -2.22
SSF1YHR066W YLR194CQ05777 254 aa1.17□□□□□ -2.22
SSF1YHR066W HPA2Q06592 156 aa1.17□□□□□ -2.22
SSF1YHR066W PRM3Q08931 133 aa1.17□□□□□ -2.22
SSF1YHR066W OST5Q92316 86 aa1.17□□□□□ -2.22
SSF1YHR066W PAU2P32612 120 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms