RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C PFY1P07274 126 aa4.64□□□□□ -1.67
PUP2YGR253C EOS1P53938 366 aa4.64□□□□□ -1.67
PUP2YGR253C NHP6AP11632 93 aaKnown RBP4.63□□□□□ -1.67
PUP2YGR253C YOP1Q12402 180 aa4.63□□□□□ -1.67
PUP2YGR253C ERG27Q12452 347 aaKnown RBP4.63□□□□□ -1.67
PUP2YGR253C YOR008C-AQ3E7B9 74 aa4.63□□□□□ -1.67
PUP2YGR253C YKL070WP36087 169 aa4.62□□□□□ -1.67
PUP2YGR253C YAR029WP39549 74 aa4.62□□□□□ -1.67
PUP2YGR253C HAC1P41546 238 aa4.62□□□□□ -1.67
PUP2YGR253C YMR295CQ03559 197 aa4.62□□□□□ -1.67
PUP2YGR253C YGL041C-BQ3E750 60 aa4.62□□□□□ -1.67
PUP2YGR253C YPR014CQ6B0W2 109 aa4.62□□□□□ -1.67
PUP2YGR253C MGR2Q02889 113 aa4.61□□□□□ -1.67
PUP2YGR253C PKR1Q03880 122 aaKnown RBP4.61□□□□□ -1.67
PUP2YGR253C TPT1Q12272 230 aaKnown RBP4.61□□□□□ -1.67
PUP2YGR253C YAL065CO13511 128 aa4.6□□□□□ -1.67
PUP2YGR253C ADH3P07246 375 aaKnown RBP4.6□□□□□ -1.67
PUP2YGR253C TY1A-LR4P0C2I8 440 aaKnown RBP4.6□□□□□ -1.67
PUP2YGR253C TY1A-DR6P0CX70 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-ER1P0CX71 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-LR2P0CX72 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-PLP0CX73 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-JR1P0CX74 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-LR3P0CX75 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-ML2P0CX76 440 aa4.6□□□□□ -1.67
PUP2YGR253C PRE1P22141 198 aaKnown RBP4.6□□□□□ -1.67
PUP2YGR253C APS1P35181 156 aa4.6□□□□□ -1.67
PUP2YGR253C URM1P40554 99 aaPredicted RBP4.6□□□□□ -1.67
PUP2YGR253C CWP2P43497 92 aa4.6□□□□□ -1.67
PUP2YGR253C MED7Q08278 222 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-GR1Q12085 440 aa4.6□□□□□ -1.67
PUP2YGR253C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.6□□□□□ -1.67
PUP2YGR253C POR1P04840 283 aaKnown RBP4.59□□□□□ -1.67
PUP2YGR253C AQY1P0CD91 305 aa4.59□□□□□ -1.67
PUP2YGR253C SEC4P07560 215 aaKnown RBP4.58□□□□□ -1.68
PUP2YGR253C PCL2P25693 308 aa4.58□□□□□ -1.68
PUP2YGR253C RPF1P38805 295 aaKnown RBP4.58□□□□□ -1.68
PUP2YGR253C TOS6P48560 102 aa4.58□□□□□ -1.68
PUP2YGR253C YGL149WP53116 101 aa4.58□□□□□ -1.68
PUP2YGR253C YIL014C-AQ02598 104 aa4.58□□□□□ -1.68
PUP2YGR253C PAU19P0CE85 124 aa4.57□□□□□ -1.68
PUP2YGR253C PAU21P0CE86 164 aa4.57□□□□□ -1.68
PUP2YGR253C PAU22P0CE87 164 aa4.57□□□□□ -1.68
PUP2YGR253C PAU3P25610 124 aa4.57□□□□□ -1.68
PUP2YGR253C PAU15P40585 124 aa4.57□□□□□ -1.68
PUP2YGR253C YDL241WQ07738 123 aa4.57□□□□□ -1.68
PUP2YGR253C AQY2P0CD90 149 aa4.56□□□□□ -1.68
PUP2YGR253C RPS22BQ3E7Y3 130 aaKnown RBP4.56□□□□□ -1.68
PUP2YGR253C VMA21P41806 77 aa4.55□□□□□ -1.68
PUP2YGR253C YCR024C-BQ3E7Z8 88 aa4.55□□□□□ -1.68
PUP2YGR253C YLR415CO13578 112 aa4.54□□□□□ -1.68
PUP2YGR253C HMRA2P0CY13 119 aa4.54□□□□□ -1.68
PUP2YGR253C SMD1Q02260 146 aaPredicted RBP4.54□□□□□ -1.68
PUP2YGR253C Q0032Q9ZZX7 96 aa4.54□□□□□ -1.68
PUP2YGR253C RPL31AP0C2H8 113 aaKnown RBP4.53□□□□□ -1.68
PUP2YGR253C OXA1P39952 402 aa4.52□□□□□ -1.69
PUP2YGR253C STF1P01098 86 aa4.51□□□□□ -1.69
PUP2YGR253C CNB1P25296 175 aa4.51□□□□□ -1.69
PUP2YGR253C ATG8P38182 117 aaRIP-Chip data4.51□□□□□ -1.69not detected
PUP2YGR253C ERV14P53173 138 aa4.51□□□□□ -1.69
PUP2YGR253C CMC2Q3E7A4 109 aa4.51□□□□□ -1.69
PUP2YGR253C YLR156WP0CE96 114 aa4.5□□□□□ -1.69
PUP2YGR253C YLR159WP0CE97 114 aa4.5□□□□□ -1.69
PUP2YGR253C YLR161WP0CE98 114 aa4.5□□□□□ -1.69
PUP2YGR253C ATP15P21306 62 aa4.5□□□□□ -1.69
PUP2YGR253C ARO2P28777 376 aaKnown RBP4.5□□□□□ -1.69
PUP2YGR253C PAU16P35994 123 aa4.5□□□□□ -1.69
PUP2YGR253C COX14P39103 70 aa4.5□□□□□ -1.69
PUP2YGR253C YFL019CP43576 117 aa4.5□□□□□ -1.69
PUP2YGR253C COA3Q3E7B2 85 aa4.5□□□□□ -1.69
PUP2YGR253C ABF2Q02486 183 aa4.49□□□□□ -1.69
PUP2YGR253C YDR042CQ03205 200 aa4.49□□□□□ -1.69
PUP2YGR253C TY1A-OLQ92392 440 aaKnown RBP4.49□□□□□ -1.69
PUP2YGR253C YBL039W-BP0C268 59 aa4.48□□□□□ -1.69
PUP2YGR253C CDC43P18898 376 aa4.48□□□□□ -1.69
PUP2YGR253C TOA2P32774 122 aa4.48□□□□□ -1.69
PUP2YGR253C YGL193CP53097 103 aa4.48□□□□□ -1.69
PUP2YGR253C MVB12P42939 101 aa4.47□□□□□ -1.69
PUP2YGR253C IGD1P43598 195 aa4.47□□□□□ -1.69
PUP2YGR253C YLR112WQ12130 139 aa4.47□□□□□ -1.69
PUP2YGR253C UBC4P15731 148 aa4.46□□□□□ -1.7
PUP2YGR253C GSP1P32835 219 aaKnown RBP4.46□□□□□ -1.7
PUP2YGR253C SHU1P38751 150 aa4.46□□□□□ -1.7
PUP2YGR253C KNH1P50112 268 aa4.46□□□□□ -1.7
PUP2YGR253C YOR268CQ08734 132 aa4.46□□□□□ -1.7
PUP2YGR253C PPT2Q12036 173 aa4.46□□□□□ -1.7
PUP2YGR253C KTI11Q3E840 82 aa4.46□□□□□ -1.7
PUP2YGR253C YGL118CP53132 145 aa4.45□□□□□ -1.7
PUP2YGR253C CMC4Q3E7A9 73 aa4.44□□□□□ -1.7
PUP2YGR253C ATP16Q12165 160 aa4.43□□□□□ -1.7
PUP2YGR253C HTL1Q9URQ5 78 aa4.43□□□□□ -1.7
PUP2YGR253C ADH1P00330 348 aaKnown RBP4.42□□□□□ -1.7
PUP2YGR253C RPL27BP0C2H7 136 aaKnown RBP4.41□□□□□ -1.7
PUP2YGR253C EDC2P40023 145 aaPredicted RBP4.41□□□□□ -1.7
PUP2YGR253C GSP2P32836 220 aaKnown RBP4.4□□□□□ -1.71
PUP2YGR253C CYT2Q00873 224 aa4.4□□□□□ -1.71
PUP2YGR253C YMR103CQ04436 120 aa4.4□□□□□ -1.71
PUP2YGR253C YER039C-AP0CD97 72 aa4.39□□□□□ -1.71
PUP2YGR253C SCM4P32564 187 aa4.39□□□□□ -1.71
PUP2YGR253C NSE4P43124 402 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms