RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W CUE4Q04201 117 aaPredicted RBP2.81□□□□□ -1.96
PTR3YFR029W NAT5Q08689 176 aa2.81□□□□□ -1.96
PTR3YFR029W VPS68Q12016 184 aa2.81□□□□□ -1.96
PTR3YFR029W YMR175W-AQ3E766 64 aa2.81□□□□□ -1.96
PTR3YFR029W GCN2P15442 1659 aa2.81□□□□□ -1.96
PTR3YFR029W YCR085WP25650 117 aa2.81□□□□□ -1.96
PTR3YFR029W POP3P53833 195 aaPredicted RBP2.81□□□□□ -1.96
PTR3YFR029W YLR194CQ05777 254 aa2.81□□□□□ -1.96
PTR3YFR029W YDL157CQ12082 118 aa2.81□□□□□ -1.96
PTR3YFR029W RPL26AP05743 127 aaKnown RBP2.8□□□□□ -1.96
PTR3YFR029W KRE1P17260 313 aa2.8□□□□□ -1.96
PTR3YFR029W PAU16P35994 123 aa2.8□□□□□ -1.96
PTR3YFR029W ATG8P38182 117 aaRIP-Chip data2.8□□□□□ -1.96not detected
PTR3YFR029W YHR138CP38841 114 aaPredicted RBP2.8□□□□□ -1.96
PTR3YFR029W SVP26P38869 228 aa2.8□□□□□ -1.96
PTR3YFR029W PAU15P40585 124 aa2.8□□□□□ -1.96
PTR3YFR029W YFL012WP43580 148 aa2.8□□□□□ -1.96
PTR3YFR029W RPL26BP53221 127 aaKnown RBP2.8□□□□□ -1.96
PTR3YFR029W RPL22BP56628 122 aaKnown RBP2.8□□□□□ -1.96
PTR3YFR029W GSC2P40989 1895 aa2.8□□□□□ -1.96
PTR3YFR029W DOP1Q03921 1698 aa2.8□□□□□ -1.96
PTR3YFR029W VMR1P38735 1592 aa2.8□□□□□ -1.96
PTR3YFR029W DNF2Q12675 1612 aa2.8□□□□□ -1.96
PTR3YFR029W YFR010W-AP0C5N0 62 aa2.8□□□□□ -1.96
PTR3YFR029W STF2P16965 84 aa2.8□□□□□ -1.96
PTR3YFR029W MRPS9P38120 278 aa2.8□□□□□ -1.96
PTR3YFR029W COX23P38824 151 aa2.8□□□□□ -1.96
PTR3YFR029W HYR1P40581 163 aaKnown RBP2.8□□□□□ -1.96
PTR3YFR029W PAU5P43575 122 aa2.8□□□□□ -1.96
PTR3YFR029W GRX5Q02784 150 aa2.8□□□□□ -1.96
PTR3YFR029W MHF1Q3E835 90 aa2.8□□□□□ -1.96
PTR3YFR029W MYO1P08964 1928 aa2.79□□□□□ -1.96
PTR3YFR029W NRG2P38082 220 aa2.79□□□□□ -1.96
PTR3YFR029W YBR209WP38311 105 aa2.79□□□□□ -1.96
PTR3YFR029W YEL014CP39999 101 aa2.79□□□□□ -1.96
PTR3YFR029W VMA21P41806 77 aa2.79□□□□□ -1.96
PTR3YFR029W SNN1P48232 102 aa2.79□□□□□ -1.96
PTR3YFR029W EMC6Q12431 108 aa2.79□□□□□ -1.96
PTR3YFR029W RIF1P29539 1916 aa2.79□□□□□ -1.96
PTR3YFR029W RPB7P34087 171 aa2.78□□□□□ -1.96
PTR3YFR029W RGM1Q00453 211 aa2.78□□□□□ -1.96
PTR3YFR029W YLR363W-AQ3E747 85 aa2.78□□□□□ -1.96
PTR3YFR029W YOR093CQ12275 1648 aa2.78□□□□□ -1.96
PTR3YFR029W ROM2P51862 1356 aaKnown RBP2.78□□□□□ -1.96
PTR3YFR029W RPS25BP0C0T4 108 aaKnown RBP2.78□□□□□ -1.96
PTR3YFR029W ICY1Q04329 127 aa2.78□□□□□ -1.96
PTR3YFR029W NUP192P47054 1683 aa2.77□□□□□ -1.97
PTR3YFR029W SOD1P00445 154 aaKnown RBP2.77□□□□□ -1.97
PTR3YFR029W YJL197C-AP0C5P0 93 aa2.77□□□□□ -1.97
PTR3YFR029W RPA12P32529 125 aaKnown RBP2.77□□□□□ -1.97
PTR3YFR029W GCV3P39726 170 aaPredicted RBP2.77□□□□□ -1.97
PTR3YFR029W PRM3Q08931 133 aa2.77□□□□□ -1.97
PTR3YFR029W RPS25AQ3E792 108 aaPredicted RBP2.77□□□□□ -1.97
PTR3YFR029W SUS1Q6WNK7 96 aa2.77□□□□□ -1.97
PTR3YFR029W CHC1P22137 1653 aaKnown RBP2.77□□□□□ -1.97
PTR3YFR029W HAP1P0CE41 1502 aa2.76□□□□□ -1.97
PTR3YFR029W QCR8P08525 94 aa2.76□□□□□ -1.97
PTR3YFR029W RDS3Q06835 107 aaPredicted RBP2.76□□□□□ -1.97
PTR3YFR029W IML1P47170 1584 aa2.76□□□□□ -1.97
PTR3YFR029W RPS22AP0C0W1 130 aaKnown RBP2.75□□□□□ -1.97
PTR3YFR029W SRX1P36077 127 aa2.75□□□□□ -1.97
PTR3YFR029W NUP188P52593 1655 aaKnown RBP2.75□□□□□ -1.97
PTR3YFR029W YLR419WQ06698 1435 aaKnown RBP2.75□□□□□ -1.97
PTR3YFR029W YMR030W-AQ3E760 96 aa2.75□□□□□ -1.97
PTR3YFR029W ENV10Q99382 181 aa2.75□□□□□ -1.97
PTR3YFR029W AGA2P32781 87 aa2.74□□□□□ -1.97
PTR3YFR029W RSM18P40033 138 aa2.73□□□□□ -1.97
PTR3YFR029W IMP2P46972 177 aa2.73□□□□□ -1.97
PTR3YFR029W YJL144WP47009 104 aa2.73□□□□□ -1.97
PTR3YFR029W ICS3P47034 131 aa2.73□□□□□ -1.97
PTR3YFR029W MET31Q03081 177 aa2.73□□□□□ -1.97
PTR3YFR029W PAI3P01094 68 aa2.73□□□□□ -1.97
PTR3YFR029W YDR119W-AQ2V2P9 66 aa2.73□□□□□ -1.97
PTR3YFR029W HMRA2P0CY13 119 aa2.72□□□□□ -1.97
PTR3YFR029W CDC39P25655 2108 aaKnown RBP2.72□□□□□ -1.97
PTR3YFR029W RPL36BO14455 100 aaKnown RBP2.71□□□□□ -1.98
PTR3YFR029W RPL36AP05745 100 aaPredicted RBP2.71□□□□□ -1.98
PTR3YFR029W ROX3P25046 220 aa2.71□□□□□ -1.98
PTR3YFR029W YHR022CP38763 256 aa2.71□□□□□ -1.98
PTR3YFR029W YPR145C-AQ2V2P0 78 aa2.71□□□□□ -1.98
PTR3YFR029W RPS22BQ3E7Y3 130 aaKnown RBP2.71□□□□□ -1.98
PTR3YFR029W BCK1Q01389 1478 aa2.71□□□□□ -1.98
PTR3YFR029W YBR027CP38220 110 aa2.71□□□□□ -1.98
PTR3YFR029W LST8P41318 303 aa2.71□□□□□ -1.98
PTR3YFR029W CYT2Q00873 224 aa2.71□□□□□ -1.98
PTR3YFR029W MLP1Q02455 1875 aaKnown RBP2.71□□□□□ -1.98
PTR3YFR029W FAS2P19097 1887 aaKnown RBP2.7□□□□□ -1.98
PTR3YFR029W YHL005CP38752 130 aa2.7□□□□□ -1.98
PTR3YFR029W YDR114CQ04597 100 aa2.7□□□□□ -1.98
PTR3YFR029W HPA2Q06592 156 aa2.7□□□□□ -1.98
PTR3YFR029W YLR285C-AQ3E771 56 aa2.7□□□□□ -1.98
PTR3YFR029W AIM4P38305 123 aaPredicted RBP2.69□□□□□ -1.98
PTR3YFR029W FLO9P39712 1322 aa2.68□□□□□ -1.98
PTR3YFR029W NHP2P32495 156 aaPredicted RBP2.68□□□□□ -1.98
PTR3YFR029W SSS1P35179 80 aa2.68□□□□□ -1.98
PTR3YFR029W YGL014C-AP0C5N1 53 aa2.68□□□□□ -1.98
PTR3YFR029W TOM6P33448 61 aa2.68□□□□□ -1.98
PTR3YFR029W POR2P40478 281 aa2.68□□□□□ -1.98
PTR3YFR029W YOL131WQ08270 108 aa2.67□□□□□ -1.98
PTR3YFR029W SPC1P46965 94 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms