RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C UBC8P28263 218 aa2.51□□□□□ -2.01
RPB7YDR404C UGX2P32772 223 aa2.51□□□□□ -2.01
RPB7YDR404C YDR366CP87287 132 aa2.51□□□□□ -2.01
RPB7YDR404C LCL2Q08045 131 aa2.51□□□□□ -2.01
RPB7YDR404C FCF2Q12035 217 aaPredicted RBP2.51□□□□□ -2.01
RPB7YDR404C VMA9Q3E7B6 73 aa2.51□□□□□ -2.01
RPB7YDR404C ATP5P09457 212 aa2.5□□□□□ -2.01
RPB7YDR404C MRPL38P35996 138 aaPredicted RBP2.5□□□□□ -2.01
RPB7YDR404C YHL018WP38744 120 aaPredicted RBP2.5□□□□□ -2.01
RPB7YDR404C FIT1Q04433 528 aa2.5□□□□□ -2.01
RPB7YDR404C YLR162WQ06235 118 aa2.5□□□□□ -2.01
RPB7YDR404C YPR145C-AQ2V2P0 78 aa2.5□□□□□ -2.01
RPB7YDR404C RPL2AP0CX45 254 aaKnown RBP2.49□□□□□ -2.01
RPB7YDR404C RPL2BP0CX46 254 aaKnown RBP2.49□□□□□ -2.01
RPB7YDR404C ATG8P38182 117 aaRIP-Chip data2.49□□□□□ -2.01not detected
RPB7YDR404C SNU13P39990 126 aaKnown RBP2.49□□□□□ -2.01
RPB7YDR404C DAD4P69851 72 aa2.49□□□□□ -2.01
RPB7YDR404C ELC1Q03071 99 aa2.49□□□□□ -2.01
RPB7YDR404C PKR1Q03880 122 aaKnown RBP2.49□□□□□ -2.01
RPB7YDR404C UPS3Q04006 179 aa2.49□□□□□ -2.01
RPB7YDR404C SDH7Q04401 133 aa2.49□□□□□ -2.01
RPB7YDR404C NMA1Q06178 401 aaKnown RBP2.49□□□□□ -2.01
RPB7YDR404C CNL1Q06333 122 aa2.49□□□□□ -2.01
RPB7YDR404C COX8P04039 78 aa2.48□□□□□ -2.01
RPB7YDR404C RAD6P06104 172 aa2.48□□□□□ -2.01
RPB7YDR404C HAP3P13434 144 aa2.48□□□□□ -2.01
RPB7YDR404C THG1P53215 237 aaKnown RBP2.48□□□□□ -2.01
RPB7YDR404C PST2Q12335 198 aaKnown RBP2.48□□□□□ -2.01
RPB7YDR404C YLR099W-AQ3E798 87 aa2.48□□□□□ -2.01
RPB7YDR404C YCR075W-AQ3E830 75 aa2.48□□□□□ -2.01
RPB7YDR404C COA6Q3E846 104 aa2.48□□□□□ -2.01
RPB7YDR404C YIL134C-AQ45U18 67 aa2.48□□□□□ -2.01
RPB7YDR404C PBI2P0CT04 75 aaKnown RBP2.47□□□□□ -2.01
RPB7YDR404C YEA6P39953 335 aa2.47□□□□□ -2.01
RPB7YDR404C YER135CP40082 130 aa2.47□□□□□ -2.01
RPB7YDR404C CCS1P40202 249 aaKnown RBP2.47□□□□□ -2.01
RPB7YDR404C YJL218WP40892 196 aaKnown RBP2.47□□□□□ -2.01
RPB7YDR404C PAM16P42949 149 aa2.47□□□□□ -2.01
RPB7YDR404C YHR007C-AQ07074 71 aa2.47□□□□□ -2.01
RPB7YDR404C FIT2Q08906 153 aa2.47□□□□□ -2.01
RPB7YDR404C YNR034W-AQ3E841 98 aa2.47□□□□□ -2.01
RPB7YDR404C SFK1P35735 353 aa2.46□□□□□ -2.02
RPB7YDR404C MRPL24P36525 258 aaPredicted RBP2.46□□□□□ -2.02
RPB7YDR404C HPA3P39979 161 aa2.46□□□□□ -2.02
RPB7YDR404C VMA21P41806 77 aa2.46□□□□□ -2.02
RPB7YDR404C APS2Q00381 147 aa2.46□□□□□ -2.02
RPB7YDR404C UBC7Q02159 165 aa2.46□□□□□ -2.02
RPB7YDR404C GRX5Q02784 150 aa2.46□□□□□ -2.02
RPB7YDR404C YOR015WQ12169 119 aa2.46□□□□□ -2.02
RPB7YDR404C RPL13AQ12690 199 aaPredicted RBP2.46□□□□□ -2.02
RPB7YDR404C YOR381W-AQ3E804 55 aa2.46□□□□□ -2.02
RPB7YDR404C VAR1P02381 398 aa2.45□□□□□ -2.02
RPB7YDR404C EMP24P32803 203 aaKnown RBP2.45□□□□□ -2.02
RPB7YDR404C MRPL11P36521 249 aaPredicted RBP2.45□□□□□ -2.02
RPB7YDR404C LSM2P38203 95 aaKnown RBP2.45□□□□□ -2.02
RPB7YDR404C TMA23Q03525 211 aa2.45□□□□□ -2.02
RPB7YDR404C YMR252CQ04814 134 aa2.45□□□□□ -2.02
RPB7YDR404C SYM1Q06563 197 aa2.45□□□□□ -2.02
RPB7YDR404C PAI3P01094 68 aa2.44□□□□□ -2.02
RPB7YDR404C ANB1P19211 157 aa2.44□□□□□ -2.02
RPB7YDR404C YHR130CP38834 111 aa2.44□□□□□ -2.02
RPB7YDR404C SWM2P40342 146 aa2.44□□□□□ -2.02
RPB7YDR404C SUS1Q6WNK7 96 aa2.44□□□□□ -2.02
RPB7YDR404C RPS25BP0C0T4 108 aaKnown RBP2.43□□□□□ -2.02
RPB7YDR404C YER039C-AP0CD97 72 aa2.43□□□□□ -2.02
RPB7YDR404C YCR001WP25347 104 aa2.43□□□□□ -2.02
RPB7YDR404C MRP49P32388 137 aa2.43□□□□□ -2.02
RPB7YDR404C RPL13BP40212 199 aaKnown RBP2.43□□□□□ -2.02
RPB7YDR404C YJR015WP47090 510 aa2.43□□□□□ -2.02
RPB7YDR404C PAU23Q07987 124 aa2.43□□□□□ -2.02
RPB7YDR404C NAT5Q08689 176 aa2.43□□□□□ -2.02
RPB7YDR404C PAU17Q12370 124 aa2.43□□□□□ -2.02
RPB7YDR404C RPS25AQ3E792 108 aaPredicted RBP2.43□□□□□ -2.02
RPB7YDR404C QCR8P08525 94 aa2.42□□□□□ -2.02
RPB7YDR404C YGL010WP25338 174 aa2.42□□□□□ -2.02
RPB7YDR404C MRP17P28778 131 aa2.42□□□□□ -2.02
RPB7YDR404C TRS20P38334 175 aa2.42□□□□□ -2.02
RPB7YDR404C LST8P41318 303 aa2.42□□□□□ -2.02
RPB7YDR404C YGR025WP53216 100 aa2.42□□□□□ -2.02
RPB7YDR404C ATG41Q12048 136 aa2.42□□□□□ -2.02
RPB7YDR404C RPB7P34087 171 aa2.41□□□□□ -2.02
RPB7YDR404C RPL14BP38754 138 aaKnown RBP2.41□□□□□ -2.02
RPB7YDR404C HTD2P38790 280 aaKnown RBP2.41□□□□□ -2.02
RPB7YDR404C GCV3P39726 170 aaPredicted RBP2.41□□□□□ -2.02
RPB7YDR404C PAU15P40585 124 aa2.41□□□□□ -2.02
RPB7YDR404C YOR011W-AQ3E807 68 aa2.41□□□□□ -2.02
RPB7YDR404C INO4P13902 151 aa2.4□□□□□ -2.03
RPB7YDR404C YGL193CP53097 103 aa2.4□□□□□ -2.03
RPB7YDR404C SGF11Q03067 99 aa2.4□□□□□ -2.03
RPB7YDR404C LIP1Q03579 150 aa2.4□□□□□ -2.03
RPB7YDR404C AVO2Q04749 426 aa2.4□□□□□ -2.03
RPB7YDR404C PAU19P0CE85 124 aa2.39□□□□□ -2.03
RPB7YDR404C PAU21P0CE86 164 aa2.39□□□□□ -2.03
RPB7YDR404C PAU22P0CE87 164 aa2.39□□□□□ -2.03
RPB7YDR404C HYP2P23301 157 aaKnown RBP2.39□□□□□ -2.03
RPB7YDR404C PAU3P25610 124 aa2.39□□□□□ -2.03
RPB7YDR404C YFL065CP43539 102 aa2.39□□□□□ -2.03
RPB7YDR404C VAM10Q08474 114 aa2.39□□□□□ -2.03
RPB7YDR404C YPR203WQ08994 102 aa2.39□□□□□ -2.03
RPB7YDR404C HMRA1P0CY11 126 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms