RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W UBC4P15731 148 aa1.14□□□□□ -2.23
SXM1YDR395W PAU3P25610 124 aa1.14□□□□□ -2.23
SXM1YDR395W QCR10P37299 77 aa1.14□□□□□ -2.23
SXM1YDR395W YBR013CP38215 129 aa1.14□□□□□ -2.23
SXM1YDR395W HSP10P38910 106 aa1.14□□□□□ -2.23
SXM1YDR395W YIL054WP40524 105 aa1.14□□□□□ -2.23
SXM1YDR395W YGL118CP53132 145 aa1.14□□□□□ -2.23
SXM1YDR395W YGR164WP53291 111 aa1.14□□□□□ -2.23
SXM1YDR395W HAL1Q01766 294 aa1.14□□□□□ -2.23
SXM1YDR395W GRX5Q02784 150 aa1.14□□□□□ -2.23
SXM1YDR395W YMR082CQ04276 118 aa1.14□□□□□ -2.23
SXM1YDR395W PAU24P38155 120 aa1.13□□□□□ -2.23
SXM1YDR395W ATG8P38182 117 aaRIP-Chip data1.13□□□□□ -2.23not detected
SXM1YDR395W SNN1P48232 102 aa1.13□□□□□ -2.23
SXM1YDR395W YIL014C-AQ02598 104 aa1.13□□□□□ -2.23
SXM1YDR395W ELP6Q04868 273 aa1.13□□□□□ -2.23
SXM1YDR395W SOM1Q05676 74 aa1.13□□□□□ -2.23
SXM1YDR395W EMC6Q12431 108 aa1.13□□□□□ -2.23
SXM1YDR395W MHF1Q3E835 90 aa1.13□□□□□ -2.23
SXM1YDR395W PAU21P0CE86 164 aa1.13□□□□□ -2.23
SXM1YDR395W PAU22P0CE87 164 aa1.13□□□□□ -2.23
SXM1YDR395W HSP26P15992 214 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23 RIP-Chip
SXM1YDR395W KRE1P17260 313 aa1.13□□□□□ -2.23
SXM1YDR395W ECM34P38728 170 aa1.13□□□□□ -2.23
SXM1YDR395W GCV3P39726 170 aaPredicted RBP1.13□□□□□ -2.23
SXM1YDR395W MIG3P39943 394 aa1.13□□□□□ -2.23
SXM1YDR395W ATP19P81451 68 aa1.13□□□□□ -2.23
SXM1YDR395W YHP1Q04116 353 aa1.13□□□□□ -2.23
SXM1YDR395W YDR115WQ04598 105 aa1.13□□□□□ -2.23
SXM1YDR395W NMA1Q06178 401 aaKnown RBP1.13□□□□□ -2.23
SXM1YDR395W YCR085WP25650 117 aa1.12□□□□□ -2.23
SXM1YDR395W FZF1P32805 299 aa1.12□□□□□ -2.23
SXM1YDR395W YHR180WP38868 163 aa1.12□□□□□ -2.23
SXM1YDR395W RRT13P40042 185 aa1.12□□□□□ -2.23
SXM1YDR395W PEP8P40335 379 aa1.12□□□□□ -2.23
SXM1YDR395W IGD1P43598 195 aa1.12□□□□□ -2.23
SXM1YDR395W MPC1P53157 130 aaKnown RBP1.12□□□□□ -2.23
SXM1YDR395W DAD4P69851 72 aa1.12□□□□□ -2.23
SXM1YDR395W PBA1Q05778 276 aa1.12□□□□□ -2.23
SXM1YDR395W YPL261CQ08976 102 aa1.12□□□□□ -2.23
SXM1YDR395W YLR363W-AQ3E747 85 aa1.12□□□□□ -2.23
SXM1YDR395W PCC1Q3E833 88 aa1.12□□□□□ -2.23
SXM1YDR395W BLM10P43583 2143 aa1.12□□□□□ -2.23
SXM1YDR395W YCR043CP25361 127 aa1.12□□□□□ -2.23
SXM1YDR395W YHL018WP38744 120 aaPredicted RBP1.12□□□□□ -2.23
SXM1YDR395W VMA21P41806 77 aa1.12□□□□□ -2.23
SXM1YDR395W BOL2P53082 120 aa1.12□□□□□ -2.23
SXM1YDR395W YOL131WQ08270 108 aa1.12□□□□□ -2.23
SXM1YDR395W IRC23Q08416 157 aa1.12□□□□□ -2.23
SXM1YDR395W ATG41Q12048 136 aa1.12□□□□□ -2.23
SXM1YDR395W RPS25BP0C0T4 108 aaKnown RBP1.11□□□□□ -2.23
SXM1YDR395W HMRA2P0CY13 119 aa1.11□□□□□ -2.23
SXM1YDR395W RPA12P32529 125 aaKnown RBP1.11□□□□□ -2.23
SXM1YDR395W YEL045CP32616 141 aa1.11□□□□□ -2.23
SXM1YDR395W MRPS9P38120 278 aa1.11□□□□□ -2.23
SXM1YDR395W ATX1P38636 73 aa1.11□□□□□ -2.23
SXM1YDR395W YFL067WP43537 175 aa1.11□□□□□ -2.23
SXM1YDR395W RPS22AP0C0W1 130 aaKnown RBP1.11□□□□□ -2.23
SXM1YDR395W PAU16P35994 123 aa1.11□□□□□ -2.23
SXM1YDR395W NRG2P38082 220 aa1.11□□□□□ -2.23
SXM1YDR395W YHR138CP38841 114 aaPredicted RBP1.11□□□□□ -2.23
SXM1YDR395W PTH1P38876 190 aaKnown RBP1.11□□□□□ -2.23
SXM1YDR395W YER187WP40102 141 aa1.11□□□□□ -2.23
SXM1YDR395W PAU15P40585 124 aa1.11□□□□□ -2.23
SXM1YDR395W YFL051CP43552 160 aa1.11□□□□□ -2.23
SXM1YDR395W PAU5P43575 122 aa1.11□□□□□ -2.23
SXM1YDR395W YFL012WP43580 148 aa1.11□□□□□ -2.23
SXM1YDR395W YNR077CP53758 84 aa1.11□□□□□ -2.23
SXM1YDR395W YDR042CQ03205 200 aa1.11□□□□□ -2.23
SXM1YDR395W POC4Q12245 148 aaPredicted RBP1.11□□□□□ -2.23
SXM1YDR395W YPR145C-AQ2V2P0 78 aa1.11□□□□□ -2.23
SXM1YDR395W YIL134C-AQ45U18 67 aa1.11□□□□□ -2.23
SXM1YDR395W ENV10Q99382 181 aa1.11□□□□□ -2.23
SXM1YDR395W COX4P04037 155 aa1.11□□□□□ -2.23
SXM1YDR395W YHR032W-AP0C5N6 59 aa1.11□□□□□ -2.23
SXM1YDR395W RPS23AP0CX29 145 aaKnown RBP1.11□□□□□ -2.23
SXM1YDR395W RPS23BP0CX30 145 aa1.11□□□□□ -2.23
SXM1YDR395W YGR269WP40326 108 aa1.11□□□□□ -2.23
SXM1YDR395W HUR1P45820 110 aa1.11□□□□□ -2.23
SXM1YDR395W YML079WQ03629 201 aa1.11□□□□□ -2.23
SXM1YDR395W YLR194CQ05777 254 aa1.11□□□□□ -2.23
SXM1YDR395W NAT5Q08689 176 aa1.11□□□□□ -2.23
SXM1YDR395W RPS22BQ3E7Y3 130 aaKnown RBP1.11□□□□□ -2.23
SXM1YDR395W YIL086CP40503 102 aa1.1□□□□□ -2.23
SXM1YDR395W DCV1P43595 202 aa1.1□□□□□ -2.23
SXM1YDR395W PRM3Q08931 133 aa1.1□□□□□ -2.23
SXM1YDR395W CYR1P08678 2026 aaKnown RBP1.1□□□□□ -2.23
SXM1YDR395W YLR236CA0A023PZG4 107 aa1.1□□□□□ -2.23
SXM1YDR395W YBL059WP34224 193 aa1.1□□□□□ -2.23
SXM1YDR395W YKR045CP36138 183 aa1.1□□□□□ -2.23
SXM1YDR395W RSM18P40033 138 aa1.1□□□□□ -2.23
SXM1YDR395W POP3P53833 195 aaPredicted RBP1.1□□□□□ -2.23
SXM1YDR395W ICY1Q04329 127 aa1.1□□□□□ -2.23
SXM1YDR395W MIX14Q04341 121 aa1.1□□□□□ -2.23
SXM1YDR395W HPA2Q06592 156 aa1.1□□□□□ -2.23
SXM1YDR395W VPS68Q12016 184 aa1.1□□□□□ -2.23
SXM1YDR395W RPS25AQ3E792 108 aaPredicted RBP1.1□□□□□ -2.23
SXM1YDR395W NHP2P32495 156 aaPredicted RBP1.09□□□□□ -2.23
SXM1YDR395W UTR5P32630 166 aa1.09□□□□□ -2.23
SXM1YDR395W COX23P38824 151 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms