RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN5	YDR335W	FMT1	P32785	401 aa		0.84	□□□□□ -2.27
MSN5	YDR335W	YBR209W	P38311	105 aa		0.84	□□□□□ -2.27
MSN5	YDR335W	DCV1	P43595	202 aa		0.84	□□□□□ -2.27
MSN5	YDR335W	ELP6	Q04868	273 aa		0.84	□□□□□ -2.27
MSN5	YDR335W	YHR007C-A	Q07074	71 aa		0.84	□□□□□ -2.27
MSN5	YDR335W	YOL085C	Q99345	113 aa		0.84	□□□□□ -2.27
MSN5	YDR335W	SMD3	P43321	101 aa	Known RBP	0.84	□□□□□ -2.28
MSN5	YDR335W	THG1	P53215	237 aa	Known RBP	0.84	□□□□□ -2.28
MSN5	YDR335W	NMA1	Q06178	401 aa	Known RBP	0.84	□□□□□ -2.28
MSN5	YDR335W	YCL001W-A	P87012	153 aa		0.84	□□□□□ -2.28
MSN5	YDR335W	OST5	Q92316	86 aa		0.84	□□□□□ -2.28
MSN5	YDR335W	ADK1	P07170	222 aa	Known RBP	0.83	□□□□□ -2.28
MSN5	YDR335W	YKL044W	P36092	106 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	PHO88	P38264	188 aa	Predicted RBP	0.83	□□□□□ -2.28
MSN5	YDR335W	YHL018W	P38744	120 aa	Predicted RBP	0.83	□□□□□ -2.28
MSN5	YDR335W	YPL067C	Q02754	198 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	VAM10	Q08474	114 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	SLH1	P53327	1967 aa	Known RBP	0.83	□□□□□ -2.28
MSN5	YDR335W	PFY1	P07274	126 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	QCR8	P08525	94 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	FPR1	P20081	114 aa	Known RBP	0.83	□□□□□ -2.28
MSN5	YDR335W	YHR022C	P38763	256 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	YHR130C	P38834	111 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	DAD3	P69850	94 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	RGM1	Q00453	211 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	YDR042C	Q03205	200 aa		0.83	□□□□□ -2.28
MSN5	YDR335W	SEC11	P15367	167 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	POR2	P40478	281 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	HYR1	P40581	163 aa	Known RBP	0.82	□□□□□ -2.28
MSN5	YDR335W	BOL2	P53082	120 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	ERV14	P53173	138 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	POC4	Q12245	148 aa	Predicted RBP	0.82	□□□□□ -2.28
MSN5	YDR335W	YOR381W-A	Q3E804	55 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	SCS22	Q6Q595	175 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	CCW14	O13547	238 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	YBR219C	P38317	127 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	YJR146W	P47174	117 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	RPL22B	P56628	122 aa	Known RBP	0.82	□□□□□ -2.28
MSN5	YDR335W	SED1	Q01589	338 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	NAT5	Q08689	176 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	YGL194C-A	Q2V2P6	80 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	CMC4	Q3E7A9	73 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	RPS25B	P0C0T4	108 aa	Known RBP	0.82	□□□□□ -2.28
MSN5	YDR335W	SCP1	Q08873	200 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	YHR086W-A	Q3E746	53 aa		0.82	□□□□□ -2.28
MSN5	YDR335W	RPS25A	Q3E792	108 aa	Predicted RBP	0.82	□□□□□ -2.28
MSN5	YDR335W	NRG2	P38082	220 aa		0.81	□□□□□ -2.28
MSN5	YDR335W	YHR138C	P38841	114 aa	Predicted RBP	0.81	□□□□□ -2.28
MSN5	YDR335W	YPL261C	Q08976	102 aa		0.81	□□□□□ -2.28
MSN5	YDR335W	SML1	Q04964	104 aa		0.81	□□□□□ -2.28
MSN5	YDR335W	GPI11	Q06636	219 aa		0.81	□□□□□ -2.28
MSN5	YDR335W	YCL048W-A	Q2V2Q2	79 aa		0.81	□□□□□ -2.28
MSN5	YDR335W	YMR030W-A	Q3E760	96 aa		0.81	□□□□□ -2.28
MSN5	YDR335W	YCL042W	P25572	119 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	HPA3	P39979	161 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	YFL051C	P43552	160 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	YBR056W-A	I2HB52	66 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	YPR096C	O13587	100 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	SRB6	P32570	121 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	UTR5	P32630	166 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	VMA21	P41806	77 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	YDR210W	Q03482	75 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	COA6	Q3E846	104 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	CYR1	P08678	2026 aa	Known RBP	0.8	□□□□□ -2.28
MSN5	YDR335W	LST8	P41318	303 aa		0.8	□□□□□ -2.28
MSN5	YDR335W	HMRA1	P0CY11	126 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	INO4	P13902	151 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	RPB7	P34087	171 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	ECM12	O13529	151 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	RPL26A	P05743	127 aa	Known RBP	0.79	□□□□□ -2.28
MSN5	YDR335W	TOM6	P33448	61 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	ICS3	P47034	131 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	RPL26B	P53221	127 aa	Known RBP	0.79	□□□□□ -2.28
MSN5	YDR335W	PRM3	Q08931	133 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	ENV10	Q99382	181 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	YCR085W	P25650	117 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	YOL118C	Q08259	102 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	DAD1	Q12248	94 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	PRM7	Q12459	698 aa		0.79	□□□□□ -2.28
MSN5	YDR335W	YBR013C	P38215	129 aa		0.78	□□□□□ -2.28
MSN5	YDR335W	MSL1	P40567	111 aa	Predicted RBP	0.78	□□□□□ -2.28
MSN5	YDR335W	RRT15	Q3E811	62 aa		0.78	□□□□□ -2.28
MSN5	YDR335W	HSP10	P38910	106 aa		0.78	□□□□□ -2.28
MSN5	YDR335W	IMP2	P46972	177 aa		0.78	□□□□□ -2.28
MSN5	YDR335W	POP3	P53833	195 aa	Predicted RBP	0.78	□□□□□ -2.28
MSN5	YDR335W	YDR029W	Q12111	104 aa		0.78	□□□□□ -2.28
MSN5	YDR335W	YDR119W-A	Q2V2P9	66 aa		0.78	□□□□□ -2.28
MSN5	YDR335W	TDA2	P40045	126 aa		0.78	□□□□□ -2.29
MSN5	YDR335W	SWM2	P40342	146 aa		0.78	□□□□□ -2.29
MSN5	YDR335W	YGL010W	P25338	174 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	AGA2	P32781	87 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	SRX1	P36077	127 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	PAU12	P53343	120 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	VPS68	Q12016	184 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	LAA1	P39526	2014 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	CYB5	P40312	120 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	EMC5	P40540	141 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	YNL122C	P53921	115 aa	Predicted RBP	0.77	□□□□□ -2.29
MSN5	YDR335W	PAU2	P32612	120 aa		0.77	□□□□□ -2.29
MSN5	YDR335W	ICY1	Q04329	127 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 1246.8 ms