RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C GRH1Q04410 372 aaKnown RBP0.59□□□□□ -2.31
SEC1YDR164C YMR103CQ04436 120 aa0.59□□□□□ -2.31
SEC1YDR164C ECM19Q06011 112 aa0.59□□□□□ -2.31
SEC1YDR164C YPL278CQ08990 100 aa0.59□□□□□ -2.31
SEC1YDR164C DFM1Q12743 341 aaKnown RBP0.59□□□□□ -2.31
SEC1YDR164C BOL1Q3E793 110 aa0.59□□□□□ -2.31
SEC1YDR164C YDL085C-AQ3E7B7 68 aaKnown RBP0.59□□□□□ -2.31
SEC1YDR164C YAL067W-AQ8TGK6 75 aa0.59□□□□□ -2.31
SEC1YDR164C YPL229WQ99395 206 aa0.59□□□□□ -2.31
SEC1YDR164C YDR157WA0A023PZE8 133 aa0.59□□□□□ -2.32
SEC1YDR164C ADH1P00330 348 aaKnown RBP0.59□□□□□ -2.32
SEC1YDR164C ATP5P09457 212 aa0.59□□□□□ -2.32
SEC1YDR164C RPL27AP0C2H6 136 aaKnown RBP0.59□□□□□ -2.32
SEC1YDR164C YDL022C-AP0C5L6 82 aa0.59□□□□□ -2.32
SEC1YDR164C YHR213WP0CI67 198 aa0.59□□□□□ -2.32
SEC1YDR164C CPT1P17898 393 aa0.59□□□□□ -2.32
SEC1YDR164C HYP2P23301 157 aaKnown RBP0.59□□□□□ -2.32
SEC1YDR164C YHL044WP38727 235 aa0.59□□□□□ -2.32
SEC1YDR164C YHR173CP38864 112 aa0.59□□□□□ -2.32
SEC1YDR164C SVP26P38869 228 aa0.59□□□□□ -2.32
SEC1YDR164C SUR2P38992 349 aa0.59□□□□□ -2.32
SEC1YDR164C PAU7P39545 55 aa0.59□□□□□ -2.32
SEC1YDR164C RRT13P40042 185 aa0.59□□□□□ -2.32
SEC1YDR164C VTC1P40046 129 aaRIP-Chip data0.59□□□□□ -2.32not detected
SEC1YDR164C YNL194CP40169 301 aa0.59□□□□□ -2.32
SEC1YDR164C YPL073CP40323 161 aa0.59□□□□□ -2.32
SEC1YDR164C CIN5P40917 295 aa0.59□□□□□ -2.32
SEC1YDR164C YGL230CP53074 147 aa0.59□□□□□ -2.32
SEC1YDR164C YGL118CP53132 145 aa0.59□□□□□ -2.32
SEC1YDR164C YGL034CP53186 121 aa0.59□□□□□ -2.32
SEC1YDR164C BRP1P53194 125 aa0.59□□□□□ -2.32
SEC1YDR164C YGR018CP53211 109 aa0.59□□□□□ -2.32
SEC1YDR164C YNL046WP53956 172 aa0.59□□□□□ -2.32
SEC1YDR164C SMD1Q02260 146 aaPredicted RBP0.59□□□□□ -2.32
SEC1YDR164C MSA1Q08471 629 aa0.59□□□□□ -2.32
SEC1YDR164C PRM3Q08931 133 aa0.59□□□□□ -2.32
SEC1YDR164C TIM22Q12328 207 aa0.59□□□□□ -2.32
SEC1YDR164C YLR363W-AQ3E747 85 aa0.59□□□□□ -2.32
SEC1YDR164C SLO1Q3E784 85 aa0.59□□□□□ -2.32
SEC1YDR164C COA6Q3E846 104 aa0.59□□□□□ -2.32
SEC1YDR164C IGO2Q9P305 131 aa0.59□□□□□ -2.32
SEC1YDR164C HTL1Q9URQ5 78 aa0.59□□□□□ -2.32
SEC1YDR164C YBR121C-AP0C5L4 52 aa0.58□□□□□ -2.32
SEC1YDR164C ANB1P19211 157 aa0.58□□□□□ -2.32
SEC1YDR164C COX10P21592 462 aa0.58□□□□□ -2.32
SEC1YDR164C YCL042WP25572 119 aa0.58□□□□□ -2.32
SEC1YDR164C SRP21P32342 167 aa0.58□□□□□ -2.32
SEC1YDR164C NHP2P32495 156 aaPredicted RBP0.58□□□□□ -2.32
SEC1YDR164C UTR5P32630 166 aa0.58□□□□□ -2.32
SEC1YDR164C UGX2P32772 223 aa0.58□□□□□ -2.32
SEC1YDR164C PAU16P35994 123 aa0.58□□□□□ -2.32
SEC1YDR164C SNF11P38956 169 aa0.58□□□□□ -2.32
SEC1YDR164C YEL067CP39978 195 aa0.58□□□□□ -2.32
SEC1YDR164C YNL198CP40166 100 aa0.58□□□□□ -2.32
SEC1YDR164C DCV1P43595 202 aa0.58□□□□□ -2.32
SEC1YDR164C YFR035CP43608 114 aa0.58□□□□□ -2.32
SEC1YDR164C HST4P53688 370 aa0.58□□□□□ -2.32
SEC1YDR164C AIM11P87275 137 aa0.58□□□□□ -2.32
SEC1YDR164C YDR042CQ03205 200 aa0.58□□□□□ -2.32
SEC1YDR164C VPS71Q03433 280 aa0.58□□□□□ -2.32
SEC1YDR164C SPG4Q04438 115 aa0.58□□□□□ -2.32
SEC1YDR164C CNL1Q06333 122 aa0.58□□□□□ -2.32
SEC1YDR164C YPL162CQ12042 273 aa0.58□□□□□ -2.32
SEC1YDR164C YHR139C-AO13536 103 aa0.57□□□□□ -2.32
SEC1YDR164C PAI3P01094 68 aa0.57□□□□□ -2.32
SEC1YDR164C RPL27BP0C2H7 136 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C DDI2P0CH63 225 aa0.57□□□□□ -2.32
SEC1YDR164C DDI3P0CH64 225 aa0.57□□□□□ -2.32
SEC1YDR164C PBI2P0CT04 75 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C RPS11AP0CX47 156 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C RPS11BP0CX48 156 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C YHR212W-AP0CX91 67 aa0.57□□□□□ -2.32
SEC1YDR164C HMRA1P0CY11 126 aa0.57□□□□□ -2.32
SEC1YDR164C CPR5P35176 225 aa0.57□□□□□ -2.32
SEC1YDR164C NRG2P38082 220 aa0.57□□□□□ -2.32
SEC1YDR164C YBL081WP38180 368 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C ATX1P38636 73 aa0.57□□□□□ -2.32
SEC1YDR164C EDC2P40023 145 aaPredicted RBP0.57□□□□□ -2.32
SEC1YDR164C YER181CP40097 107 aa0.57□□□□□ -2.32
SEC1YDR164C POR2P40478 281 aa0.57□□□□□ -2.32
SEC1YDR164C AGE2P40529 298 aa0.57□□□□□ -2.32
SEC1YDR164C IMP2P46972 177 aa0.57□□□□□ -2.32
SEC1YDR164C RPL38P49167 78 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C KNH1P50112 268 aa0.57□□□□□ -2.32
SEC1YDR164C ALG13P53178 202 aa0.57□□□□□ -2.32
SEC1YDR164C MIX17Q03667 156 aa0.57□□□□□ -2.32
SEC1YDR164C HOR7Q05827 59 aa0.57□□□□□ -2.32
SEC1YDR164C YPR013CQ12145 317 aa0.57□□□□□ -2.32
SEC1YDR164C YLR118CQ12354 227 aa0.57□□□□□ -2.32
SEC1YDR164C YOR008C-AQ3E7B9 74 aa0.57□□□□□ -2.32
SEC1YDR164C RPS22BQ3E7Y3 130 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C RRT15Q3E811 62 aa0.57□□□□□ -2.32
SEC1YDR164C YAR023CD6VPM8 179 aa0.57□□□□□ -2.32
SEC1YDR164C CCW14O13547 238 aa0.57□□□□□ -2.32
SEC1YDR164C MBF1O14467 151 aaKnown RBP0.57□□□□□ -2.32
SEC1YDR164C RAD6P06104 172 aa0.57□□□□□ -2.32
SEC1YDR164C YPR170W-BP0C5R9 85 aa0.57□□□□□ -2.32
SEC1YDR164C YRA2P36036 203 aaKnown RBP RIP-Chip data0.57□□□□□ -2.32not detected
SEC1YDR164C YKR041WP36134 250 aa0.57□□□□□ -2.32
SEC1YDR164C YHL037CP38733 133 aa0.57□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms