RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	VHS2	P40463	436 aa		4.23	□□□□□ -1.73
RPT2	YDL007W	VPS55	P47111	140 aa		4.23	□□□□□ -1.73
RPT2	YDL007W	YOR376W	Q08900	122 aa		4.23	□□□□□ -1.73
RPT2	YDL007W	YLR342W-A	Q3E810	57 aa		4.23	□□□□□ -1.73
RPT2	YDL007W	IGO2	Q9P305	131 aa		4.23	□□□□□ -1.73
RPT2	YDL007W	Q0255	P03881	472 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	RAD6	P06104	172 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YER039C-A	P0CD97	72 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YCR085W	P25650	117 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	MID2	P36027	376 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YHR140W	P38842	239 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	MTC6	P38849	526 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YER084W	P40057	128 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YIL059C	P40520	121 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	SKI6	P46948	246 aa	Predicted RBP	4.22	□□□□□ -1.73
RPT2	YDL007W	TOS6	P48560	102 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YIP1	P53039	248 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	ABF2	Q02486	183 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	YTH1	Q06102	208 aa	Predicted RBP	4.22	□□□□□ -1.73
RPT2	YDL007W	YCL021W-A	Q96VH3	125 aa		4.22	□□□□□ -1.73
RPT2	YDL007W	RPS8A	P0CX39	200 aa	Known RBP	4.21	□□□□□ -1.73
RPT2	YDL007W	RPS8B	P0CX40	200 aa	Known RBP	4.21	□□□□□ -1.73
RPT2	YDL007W	YER085C	P40058	173 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	YIA6	P40556	373 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	MRPL49	P40858	161 aa	Predicted RBP	4.21	□□□□□ -1.73
RPT2	YDL007W	YFL051C	P43552	160 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	IMP2	P46972	177 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	LCB3	P47013	409 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	AIM11	P87275	137 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	COX12	Q01519	83 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	YMR181C	Q03231	154 aa		4.21	□□□□□ -1.73
RPT2	YDL007W	YHR139C-A	O13536	103 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	GLE2	P40066	365 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	SPI1	P40092	148 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	PIR5	P46999	287 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	KNH1	P50112	268 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	SBH2	P52871	88 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	AIM34	Q03673	198 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	YLR194C	Q05777	254 aa		4.21	□□□□□ -1.74
RPT2	YDL007W	YKR045C	P36138	183 aa		4.2	□□□□□ -1.74
RPT2	YDL007W	CAX4	P53223	239 aa		4.2	□□□□□ -1.74
RPT2	YDL007W	COF1	Q03048	143 aa	Known RBP	4.2	□□□□□ -1.74
RPT2	YDL007W	YOR029W	Q12243	111 aa		4.2	□□□□□ -1.74
RPT2	YDL007W	PRM7	Q12459	698 aa		4.2	□□□□□ -1.74
RPT2	YDL007W	MRPL23	Q12487	163 aa	Predicted RBP	4.2	□□□□□ -1.74
RPT2	YDL007W	ECM12	O13529	151 aa		4.19	□□□□□ -1.74
RPT2	YDL007W	UBC5	P15732	148 aa		4.19	□□□□□ -1.74
RPT2	YDL007W	KTI12	P34253	313 aa	Known RBP	4.19	□□□□□ -1.74
RPT2	YDL007W	MRPL39	P36533	70 aa		4.19	□□□□□ -1.74
RPT2	YDL007W	SMP1	P38128	452 aa		4.19	□□□□□ -1.74
RPT2	YDL007W	YDR029W	Q12111	104 aa		4.19	□□□□□ -1.74
RPT2	YDL007W	RNH203	Q12338	110 aa		4.19	□□□□□ -1.74
RPT2	YDL007W	INO2	P26798	304 aa		4.18	□□□□□ -1.74
RPT2	YDL007W	RRT1	P38192	103 aa		4.18	□□□□□ -1.74
RPT2	YDL007W	YHL042W	P38729	150 aa		4.18	□□□□□ -1.74
RPT2	YDL007W	YJL027C	P47063	138 aa	Predicted RBP	4.18	□□□□□ -1.74
RPT2	YDL007W	YDR381C-A	Q3E6R5	114 aa		4.18	□□□□□ -1.74
RPT2	YDL007W	RPL28	P02406	149 aa	Known RBP	4.17	□□□□□ -1.74
RPT2	YDL007W	YNL190W	P53872	204 aa		4.17	□□□□□ -1.74
RPT2	YDL007W	IRC23	Q08416	157 aa		4.17	□□□□□ -1.74
RPT2	YDL007W	CRC1	Q12289	327 aa		4.17	□□□□□ -1.74
RPT2	YDL007W	YMR105W-A	Q8TGS8	64 aa		4.17	□□□□□ -1.74
RPT2	YDL007W	PBI2	P0CT04	75 aa	Known RBP	4.16	□□□□□ -1.74
RPT2	YDL007W	ATP15	P21306	62 aa		4.16	□□□□□ -1.74
RPT2	YDL007W	MRPS12	P53732	153 aa		4.16	□□□□□ -1.74
RPT2	YDL007W	YPL038W-A	Q3E7B4	63 aa		4.16	□□□□□ -1.74
RPT2	YDL007W	YOR032W-A	Q8TGS1	66 aa		4.16	□□□□□ -1.74
RPT2	YDL007W	AIM19	P40502	157 aa		4.15	□□□□□ -1.75
RPT2	YDL007W	SIP18	P50263	79 aa		4.15	□□□□□ -1.75
RPT2	YDL007W	YDR209C	Q03480	137 aa		4.15	□□□□□ -1.75
RPT2	YDL007W	YOR008C-A	Q3E7B9	74 aa		4.15	□□□□□ -1.75
RPT2	YDL007W	RPL39	P04650	51 aa		4.14	□□□□□ -1.75
RPT2	YDL007W	RPL2A	P0CX45	254 aa	Known RBP	4.14	□□□□□ -1.75
RPT2	YDL007W	RPL2B	P0CX46	254 aa	Known RBP	4.14	□□□□□ -1.75
RPT2	YDL007W	TOM6	P33448	61 aa		4.14	□□□□□ -1.75
RPT2	YDL007W	PBA1	Q05778	276 aa		4.13	□□□□□ -1.75
RPT2	YDL007W	GAT3	Q07928	141 aa		4.13	□□□□□ -1.75
RPT2	YDL007W	YOL160W	Q08321	113 aa		4.13	□□□□□ -1.75
RPT2	YDL007W	CCW14	O13547	238 aa		4.12	□□□□□ -1.75
RPT2	YDL007W	YBR121C-A	P0C5L4	52 aa		4.12	□□□□□ -1.75
RPT2	YDL007W	RPL42A	P0CX27	106 aa	Known RBP	4.12	□□□□□ -1.75
RPT2	YDL007W	RPL42B	P0CX28	106 aa	Known RBP	4.12	□□□□□ -1.75
RPT2	YDL007W	RPL18A	P0CX49	186 aa	Known RBP	4.12	□□□□□ -1.75
RPT2	YDL007W	RPL18B	P0CX50	186 aa	Known RBP	4.12	□□□□□ -1.75
RPT2	YDL007W	YNL234W	P53857	426 aa		4.12	□□□□□ -1.75
RPT2	YDL007W	SHH4	Q06236	168 aa		4.12	□□□□□ -1.75
RPT2	YDL007W	RPS28B	P0C0X0	67 aa	Known RBP	4.11	□□□□□ -1.75
RPT2	YDL007W	YCR050C	P25630	102 aa		4.11	□□□□□ -1.75
RPT2	YDL007W	ADH5	P38113	351 aa	Known RBP	4.11	□□□□□ -1.75
RPT2	YDL007W	YHL018W	P38744	120 aa	Predicted RBP	4.11	□□□□□ -1.75
RPT2	YDL007W	YJR146W	P47174	117 aa		4.11	□□□□□ -1.75
RPT2	YDL007W	SBH1	P52870	82 aa		4.11	□□□□□ -1.75
RPT2	YDL007W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.11	□□□□□ -1.75
RPT2	YDL007W	MPC2	P38857	129 aa		4.1	□□□□□ -1.75
RPT2	YDL007W	ERG28	P40030	148 aa		4.1	□□□□□ -1.75
RPT2	YDL007W	PEX17	P40155	199 aa		4.1	□□□□□ -1.75
RPT2	YDL007W	SIM1	P40472	476 aa		4.1	□□□□□ -1.75
RPT2	YDL007W	DCV1	P43595	202 aa		4.1	□□□□□ -1.75
RPT2	YDL007W	YGR025W	P53216	100 aa		4.1	□□□□□ -1.75
RPT2	YDL007W	TRP1	P00912	224 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 98.1 ms