RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ARO2P28777 376 aaKnown RBP5.26□□□□□ -1.57
TDP1YBR223C YNL217WP40152 326 aa5.26□□□□□ -1.57
TDP1YBR223C MRPS8Q03799 155 aa5.26□□□□□ -1.57
TDP1YBR223C PRP8P33334 2413 aaKnown RBP5.26□□□□□ -1.57
TDP1YBR223C RPL43AP0CX25 92 aaKnown RBP5.26□□□□□ -1.57
TDP1YBR223C RPL43BP0CX26 92 aa5.26□□□□□ -1.57
TDP1YBR223C RPS8AP0CX39 200 aaKnown RBP5.26□□□□□ -1.57
TDP1YBR223C RPS8BP0CX40 200 aaKnown RBP5.26□□□□□ -1.57
TDP1YBR223C RPL16AP26784 199 aaKnown RBP5.26□□□□□ -1.57
TDP1YBR223C VHS2P40463 436 aa5.26□□□□□ -1.57
TDP1YBR223C YJR146WP47174 117 aa5.26□□□□□ -1.57
TDP1YBR223C SCW10Q04951 389 aa5.26□□□□□ -1.57
TDP1YBR223C YLR194CQ05777 254 aa5.26□□□□□ -1.57
TDP1YBR223C MSA1Q08471 629 aa5.26□□□□□ -1.57
TDP1YBR223C URA2P07259 2214 aaKnown RBP5.25□□□□□ -1.57
TDP1YBR223C YER145C-AA0A023PYF4 145 aa5.25□□□□□ -1.57
TDP1YBR223C CPR1P14832 162 aaKnown RBP5.25□□□□□ -1.57
TDP1YBR223C AGE2P40529 298 aa5.25□□□□□ -1.57
TDP1YBR223C YOR097CQ12274 175 aaPredicted RBP5.25□□□□□ -1.57
TDP1YBR223C MRPL23Q12487 163 aaPredicted RBP5.25□□□□□ -1.57
TDP1YBR223C CDC43P18898 376 aa5.24□□□□□ -1.57
TDP1YBR223C YPT53P36019 220 aa5.24□□□□□ -1.57
TDP1YBR223C YBR209WP38311 105 aa5.24□□□□□ -1.57
TDP1YBR223C CIN5P40917 295 aa5.24□□□□□ -1.57
TDP1YBR223C ALG13P53178 202 aa5.24□□□□□ -1.57
TDP1YBR223C SLO1Q3E784 85 aa5.24□□□□□ -1.57
TDP1YBR223C TAR1Q8TGM6 124 aa5.24□□□□□ -1.57
TDP1YBR223C CCW14O13547 238 aa5.23□□□□□ -1.57
TDP1YBR223C RRT13P40042 185 aa5.23□□□□□ -1.57
TDP1YBR223C VTC1P40046 129 aaRIP-Chip data5.23□□□□□ -1.57not detected
TDP1YBR223C YER085CP40058 173 aa5.23□□□□□ -1.57
TDP1YBR223C TRP1P00912 224 aa5.23□□□□□ -1.57
TDP1YBR223C NHP2P32495 156 aaPredicted RBP5.23□□□□□ -1.57
TDP1YBR223C YCH1P42937 148 aa5.23□□□□□ -1.57
TDP1YBR223C YFR035CP43608 114 aa5.23□□□□□ -1.57
TDP1YBR223C LSM6Q06406 86 aaKnown RBP5.23□□□□□ -1.57
TDP1YBR223C MET32Q12041 191 aa5.23□□□□□ -1.57
TDP1YBR223C RPL28P02406 149 aaKnown RBP5.22□□□□□ -1.57
TDP1YBR223C RPL18AP0CX49 186 aaKnown RBP5.22□□□□□ -1.57
TDP1YBR223C RPL18BP0CX50 186 aaKnown RBP5.22□□□□□ -1.57
TDP1YBR223C POP7P38291 140 aa5.22□□□□□ -1.57
TDP1YBR223C FIP1P45976 327 aa5.22□□□□□ -1.57
TDP1YBR223C YGL088WP53151 121 aa5.22□□□□□ -1.57
TDP1YBR223C RPL15AP05748 204 aaKnown RBP5.21□□□□□ -1.58
TDP1YBR223C PEX17P40155 199 aa5.21□□□□□ -1.58
TDP1YBR223C RPL2AP0CX45 254 aaKnown RBP5.2□□□□□ -1.58
TDP1YBR223C RPL2BP0CX46 254 aaKnown RBP5.2□□□□□ -1.58
TDP1YBR223C SOH1P38633 127 aa5.2□□□□□ -1.58
TDP1YBR223C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
TDP1YBR223C YCL021W-AQ96VH3 125 aa5.2□□□□□ -1.58
TDP1YBR223C RPS11AP0CX47 156 aaKnown RBP5.19□□□□□ -1.58
TDP1YBR223C RPS11BP0CX48 156 aaKnown RBP5.19□□□□□ -1.58
TDP1YBR223C MID2P36027 376 aa5.19□□□□□ -1.58
TDP1YBR223C YIL059CP40520 121 aa5.19□□□□□ -1.58
TDP1YBR223C PMP3P87284 55 aa5.19□□□□□ -1.58
TDP1YBR223C MEC1P38111 2368 aa5.19□□□□□ -1.58
TDP1YBR223C SHU1P38751 150 aa5.19□□□□□ -1.58
TDP1YBR223C YHR212W-AP0CX91 67 aa5.18□□□□□ -1.58
TDP1YBR223C UGX2P32772 223 aa5.18□□□□□ -1.58
TDP1YBR223C YEL008WP40001 126 aa5.18□□□□□ -1.58
TDP1YBR223C YDL186WP48568 277 aa5.18□□□□□ -1.58
TDP1YBR223C MRPS12P53732 153 aa5.18□□□□□ -1.58
TDP1YBR223C YNL190WP53872 204 aa5.18□□□□□ -1.58
TDP1YBR223C MPC2P38857 129 aa5.17□□□□□ -1.58
TDP1YBR223C HPA2Q06592 156 aa5.17□□□□□ -1.58
TDP1YBR223C CYC7P00045 113 aa5.16□□□□□ -1.58
TDP1YBR223C DUT1P33317 147 aa5.16□□□□□ -1.58
TDP1YBR223C ATX1P38636 73 aa5.16□□□□□ -1.58
TDP1YBR223C UBC5P15732 148 aa5.15□□□□□ -1.58
TDP1YBR223C OST2P46964 130 aa5.15□□□□□ -1.58
TDP1YBR223C YPS5P53057 165 aa5.15□□□□□ -1.58
TDP1YBR223C QCR8P08525 94 aa5.15□□□□□ -1.59
TDP1YBR223C RTG1P32607 177 aa5.14□□□□□ -1.59
TDP1YBR223C YBR144CP34215 104 aa5.14□□□□□ -1.59
TDP1YBR223C YCR075W-AQ3E830 75 aa5.14□□□□□ -1.59
TDP1YBR223C KRE9P39005 276 aa5.13□□□□□ -1.59
TDP1YBR223C ARC15P40518 154 aaRIP-Chip data5.13□□□□□ -1.59not detected
TDP1YBR223C YBR126W-AQ8TGU7 68 aa5.13□□□□□ -1.59
TDP1YBR223C NRG2P38082 220 aa5.12□□□□□ -1.59
TDP1YBR223C YHR130CP38834 111 aa5.12□□□□□ -1.59
TDP1YBR223C PPT2Q12036 173 aa5.12□□□□□ -1.59
TDP1YBR223C YAR029WP39549 74 aa5.12□□□□□ -1.59
TDP1YBR223C INO4P13902 151 aa5.11□□□□□ -1.59
TDP1YBR223C YMR295CQ03559 197 aa5.11□□□□□ -1.59
TDP1YBR223C COX10P21592 462 aa5.1□□□□□ -1.59
TDP1YBR223C RPA12P32529 125 aaKnown RBP5.1□□□□□ -1.59
TDP1YBR223C YIA6P40556 373 aa5.1□□□□□ -1.59
TDP1YBR223C YDR274CP87283 123 aa5.1□□□□□ -1.59
TDP1YBR223C ABF2Q02486 183 aa5.1□□□□□ -1.59
TDP1YBR223C YCR001WP25347 104 aa5.09□□□□□ -1.59
TDP1YBR223C DSE2P38844 325 aa5.09□□□□□ -1.59
TDP1YBR223C EOS1P53938 366 aa5.09□□□□□ -1.59
TDP1YBR223C YGR035W-AQ45U48 73 aa5.09□□□□□ -1.59
TDP1YBR223C TOR1P35169 2470 aa5.09□□□□□ -1.59
TDP1YBR223C YGR240C-AQ3E786 66 aa5.08□□□□□ -1.6
TDP1YBR223C YMR122W-AQ3E842 84 aa5.08□□□□□ -1.6
TDP1YBR223C ISD11Q6Q560 94 aa5.08□□□□□ -1.6
TDP1YBR223C COX14P39103 70 aa5.08□□□□□ -1.6
TDP1YBR223C MSN1P22148 382 aa5.07□□□□□ -1.6
TDP1YBR223C YCL042WP25572 119 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms