RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PAI3P01094 68 aa4.19□□□□□ -1.74
PDB1YBR221C FUN14P18411 198 aa4.19□□□□□ -1.74
PDB1YBR221C YCR043CP25361 127 aa4.19□□□□□ -1.74
PDB1YBR221C FYV5P25585 152 aa4.19□□□□□ -1.74
PDB1YBR221C FZF1P32805 299 aa4.19□□□□□ -1.74
PDB1YBR221C YHL018WP38744 120 aaPredicted RBP4.19□□□□□ -1.74
PDB1YBR221C PEP8P40335 379 aa4.19□□□□□ -1.74
PDB1YBR221C REE1P40893 198 aa4.19□□□□□ -1.74
PDB1YBR221C VMA21P41806 77 aa4.19□□□□□ -1.74
PDB1YBR221C RSM19P53733 91 aaPredicted RBP4.19□□□□□ -1.74
PDB1YBR221C BOL2P53082 120 aa4.18□□□□□ -1.74
PDB1YBR221C YLR296WQ05898 108 aa4.18□□□□□ -1.74
PDB1YBR221C DYN1P36022 4092 aa4.18□□□□□ -1.74
PDB1YBR221C YHR032W-AP0C5N6 59 aa4.17□□□□□ -1.74
PDB1YBR221C YEL045CP32616 141 aa4.17□□□□□ -1.74
PDB1YBR221C YBL059WP34224 193 aa4.17□□□□□ -1.74
PDB1YBR221C ECM34P38728 170 aa4.17□□□□□ -1.74
PDB1YBR221C IRC23Q08416 157 aa4.17□□□□□ -1.74
PDB1YBR221C SUS1Q6WNK7 96 aa4.17□□□□□ -1.74
PDB1YBR221C YCR085WP25650 117 aa4.16□□□□□ -1.74
PDB1YBR221C SVP26P38869 228 aa4.16□□□□□ -1.74
PDB1YBR221C IRC19Q07843 230 aa4.16□□□□□ -1.74
PDB1YBR221C YHR138CP38841 114 aaPredicted RBP4.15□□□□□ -1.75
PDB1YBR221C IGO1P53897 168 aa4.15□□□□□ -1.75
PDB1YBR221C YML079WQ03629 201 aa4.15□□□□□ -1.75
PDB1YBR221C MIG1P27705 504 aa4.14□□□□□ -1.75
PDB1YBR221C SSS1P35179 80 aa4.14□□□□□ -1.75
PDB1YBR221C YER187WP40102 141 aa4.14□□□□□ -1.75
PDB1YBR221C YOR015WQ12169 119 aa4.14□□□□□ -1.75
PDB1YBR221C DAD1Q12248 94 aa4.14□□□□□ -1.75
PDB1YBR221C RPS25BP0C0T4 108 aaKnown RBP4.13□□□□□ -1.75
PDB1YBR221C ASK1P35734 292 aa4.13□□□□□ -1.75
PDB1YBR221C HSP10P38910 106 aa4.13□□□□□ -1.75
PDB1YBR221C SWM2P40342 146 aa4.13□□□□□ -1.75
PDB1YBR221C SMD3P43321 101 aaKnown RBP4.13□□□□□ -1.75
PDB1YBR221C YDL241WQ07738 123 aa4.13□□□□□ -1.75
PDB1YBR221C TMC1Q08422 150 aaPredicted RBP4.13□□□□□ -1.75
PDB1YBR221C EMC6Q12431 108 aa4.13□□□□□ -1.75
PDB1YBR221C YLR363W-AQ3E747 85 aa4.13□□□□□ -1.75
PDB1YBR221C RPA12P32529 125 aaKnown RBP4.12□□□□□ -1.75
PDB1YBR221C MID2P36027 376 aa4.12□□□□□ -1.75
PDB1YBR221C YKR045CP36138 183 aa4.12□□□□□ -1.75
PDB1YBR221C RPL22BP56628 122 aaKnown RBP4.12□□□□□ -1.75
PDB1YBR221C YDR042CQ03205 200 aa4.12□□□□□ -1.75
PDB1YBR221C PRM3Q08931 133 aa4.12□□□□□ -1.75
PDB1YBR221C YOL085CQ99345 113 aa4.12□□□□□ -1.75
PDB1YBR221C YSF3P0C074 85 aaPredicted RBP4.11□□□□□ -1.75
PDB1YBR221C PAU21P0CE86 164 aa4.11□□□□□ -1.75
PDB1YBR221C PAU22P0CE87 164 aa4.11□□□□□ -1.75
PDB1YBR221C CDC39P25655 2108 aaKnown RBP4.11□□□□□ -1.75
PDB1YBR221C YKR032WP36127 104 aa4.11□□□□□ -1.75
PDB1YBR221C NMA1Q06178 401 aaKnown RBP4.11□□□□□ -1.75
PDB1YBR221C NAT5Q08689 176 aa4.11□□□□□ -1.75
PDB1YBR221C YPL261CQ08976 102 aa4.11□□□□□ -1.75
PDB1YBR221C ATG41Q12048 136 aa4.11□□□□□ -1.75
PDB1YBR221C RRT15Q3E811 62 aa4.11□□□□□ -1.75
PDB1YBR221C MHF1Q3E835 90 aa4.11□□□□□ -1.75
PDB1YBR221C YBR298C-AQ8TGK4 73 aa4.11□□□□□ -1.75
PDB1YBR221C FLO9P39712 1322 aa4.11□□□□□ -1.75
PDB1YBR221C MRPL27P36526 146 aaPredicted RBP4.1□□□□□ -1.75
PDB1YBR221C YEL067CP39978 195 aa4.1□□□□□ -1.75
PDB1YBR221C SNN1P48232 102 aa4.1□□□□□ -1.75
PDB1YBR221C PPT2Q12036 173 aa4.1□□□□□ -1.75
PDB1YBR221C POC4Q12245 148 aaPredicted RBP4.1□□□□□ -1.75
PDB1YBR221C MDN1Q12019 4910 aaKnown RBP4.09□□□□□ -1.75
PDB1YBR221C KRE1P17260 313 aa4.09□□□□□ -1.75
PDB1YBR221C YGR269WP40326 108 aa4.09□□□□□ -1.75
PDB1YBR221C YMR030W-AQ3E760 96 aa4.09□□□□□ -1.75
PDB1YBR221C ENV10Q99382 181 aa4.09□□□□□ -1.75
PDB1YBR221C Q0297Q9ZZV8 51 aa4.09□□□□□ -1.75
PDB1YBR221C BLM10P43583 2143 aa4.09□□□□□ -1.76
PDB1YBR221C GLT1Q12680 2145 aaKnown RBP4.09□□□□□ -1.76
PDB1YBR221C URA2P07259 2214 aaKnown RBP4.08□□□□□ -1.76
PDB1YBR221C YHR180WP38868 163 aa4.08□□□□□ -1.76
PDB1YBR221C YPR013CQ12145 317 aa4.08□□□□□ -1.76
PDB1YBR221C YOR268CQ08734 132 aa4.07□□□□□ -1.76
PDB1YBR221C YMR175W-AQ3E766 64 aa4.07□□□□□ -1.76
PDB1YBR221C OST5Q92316 86 aa4.07□□□□□ -1.76
PDB1YBR221C TOM6P33448 61 aa4.06□□□□□ -1.76
PDB1YBR221C YHL037CP38733 133 aa4.06□□□□□ -1.76
PDB1YBR221C RPL33BP41056 107 aaKnown RBP4.06□□□□□ -1.76
PDB1YBR221C YGL149WP53116 101 aa4.06□□□□□ -1.76
PDB1YBR221C PAU12P53343 120 aa4.06□□□□□ -1.76
PDB1YBR221C YNR077CP53758 84 aa4.06□□□□□ -1.76
PDB1YBR221C RPS25AQ3E792 108 aaPredicted RBP4.06□□□□□ -1.76
PDB1YBR221C YHR213WP0CI67 198 aa4.05□□□□□ -1.76
PDB1YBR221C RPS23AP0CX29 145 aaKnown RBP4.05□□□□□ -1.76
PDB1YBR221C RPS23BP0CX30 145 aa4.05□□□□□ -1.76
PDB1YBR221C YHR214C-DP0CX93 97 aa4.05□□□□□ -1.76
PDB1YBR221C PAU2P32612 120 aa4.05□□□□□ -1.76
PDB1YBR221C YHL005CP38752 130 aa4.05□□□□□ -1.76
PDB1YBR221C DCV1P43595 202 aa4.05□□□□□ -1.76
PDB1YBR221C BRP1P53194 125 aa4.05□□□□□ -1.76
PDB1YBR221C POP3P53833 195 aaPredicted RBP4.05□□□□□ -1.76
PDB1YBR221C YPR153WQ06537 140 aa4.05□□□□□ -1.76
PDB1YBR221C YLR236CA0A023PZG4 107 aa4.04□□□□□ -1.76
PDB1YBR221C RSM18P40033 138 aa4.04□□□□□ -1.76
PDB1YBR221C YOL131WQ08270 108 aa4.04□□□□□ -1.76
PDB1YBR221C PAU19P0CE85 124 aa4.03□□□□□ -1.76
PDB1YBR221C PAU3P25610 124 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms