RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C POP3P53833 195 aaPredicted RBP4□□□□□ -1.77
SEC18YBR080C IGO1P53897 168 aa4□□□□□ -1.77
SEC18YBR080C COX8P04039 78 aa3.99□□□□□ -1.77
SEC18YBR080C FPR1P20081 114 aaKnown RBP3.99□□□□□ -1.77
SEC18YBR080C HSP26P15992 214 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SEC18YBR080C VPS68Q12016 184 aa3.98□□□□□ -1.77
SEC18YBR080C RPL26AP05743 127 aaKnown RBP3.98□□□□□ -1.77
SEC18YBR080C PDX3P38075 228 aaKnown RBP3.98□□□□□ -1.77
SEC18YBR080C RPL26BP53221 127 aaKnown RBP3.98□□□□□ -1.77
SEC18YBR080C FIT2Q08906 153 aa3.98□□□□□ -1.77
SEC18YBR080C STF2P16965 84 aa3.97□□□□□ -1.77
SEC18YBR080C MRPL44P19956 98 aa3.97□□□□□ -1.77
SEC18YBR080C DAD1Q12248 94 aa3.97□□□□□ -1.77
SEC18YBR080C CYB5P40312 120 aa3.97□□□□□ -1.77
SEC18YBR080C HUR1P45820 110 aa3.97□□□□□ -1.77
SEC18YBR080C BRP1P53194 125 aa3.97□□□□□ -1.77
SEC18YBR080C TMC1Q08422 150 aaPredicted RBP3.97□□□□□ -1.77
SEC18YBR080C PCC1Q3E833 88 aa3.97□□□□□ -1.77
SEC18YBR080C CUE4Q04201 117 aaPredicted RBP3.96□□□□□ -1.78
SEC18YBR080C YKR045CP36138 183 aa3.95□□□□□ -1.78
SEC18YBR080C NAT5Q08689 176 aa3.95□□□□□ -1.78
SEC18YBR080C ATG8P38182 117 aaRIP-Chip data3.95□□□□□ -1.78not detected
SEC18YBR080C CIS3P47001 227 aa3.95□□□□□ -1.78
SEC18YBR080C YPR153WQ06537 140 aa3.95□□□□□ -1.78
SEC18YBR080C YBR209WP38311 105 aa3.94□□□□□ -1.78
SEC18YBR080C YFL065CP43539 102 aa3.94□□□□□ -1.78
SEC18YBR080C YFL012WP43580 148 aa3.94□□□□□ -1.78
SEC18YBR080C AVO2Q04749 426 aa3.94□□□□□ -1.78
SEC18YBR080C YLR194CQ05777 254 aa3.94□□□□□ -1.78
SEC18YBR080C YPR203WQ08994 102 aa3.94□□□□□ -1.78
SEC18YBR080C YDR042CQ03205 200 aa3.93□□□□□ -1.78
SEC18YBR080C MIX14Q04341 121 aa3.93□□□□□ -1.78
SEC18YBR080C HSP150P32478 413 aa3.92□□□□□ -1.78
SEC18YBR080C OST5Q92316 86 aa3.92□□□□□ -1.78
SEC18YBR080C PAU16P35994 123 aa3.92□□□□□ -1.78
SEC18YBR080C COX23P38824 151 aa3.92□□□□□ -1.78
SEC18YBR080C YIR020CP40575 100 aa3.92□□□□□ -1.78
SEC18YBR080C PAU15P40585 124 aa3.92□□□□□ -1.78
SEC18YBR080C SNN1P48232 102 aa3.92□□□□□ -1.78
SEC18YBR080C GRX5Q02784 150 aa3.92□□□□□ -1.78
SEC18YBR080C PAU5P43575 122 aa3.91□□□□□ -1.78
SEC18YBR080C DAN1P47178 298 aa3.91□□□□□ -1.78
SEC18YBR080C YGL260WP53056 76 aa3.91□□□□□ -1.78
SEC18YBR080C POC4Q12245 148 aaPredicted RBP3.91□□□□□ -1.78
SEC18YBR080C LAA1P39526 2014 aa3.91□□□□□ -1.78
SEC18YBR080C YDL157CQ12082 118 aa3.91□□□□□ -1.78
SEC18YBR080C MYO1P08964 1928 aa3.9□□□□□ -1.78
SEC18YBR080C RPS25BP0C0T4 108 aaKnown RBP3.9□□□□□ -1.79
SEC18YBR080C YHR213WP0CI67 198 aa3.9□□□□□ -1.79
SEC18YBR080C KRE1P17260 313 aa3.9□□□□□ -1.79
SEC18YBR080C RPS25AQ3E792 108 aaPredicted RBP3.9□□□□□ -1.79
SEC18YBR080C AGA2P32781 87 aa3.9□□□□□ -1.79
SEC18YBR080C SVP26P38869 228 aa3.9□□□□□ -1.79
SEC18YBR080C VMA21P41806 77 aa3.9□□□□□ -1.79
SEC18YBR080C YEL014CP39999 101 aa3.89□□□□□ -1.79
SEC18YBR080C YHR213W-AQ8TGT4 77 aa3.89□□□□□ -1.79
SEC18YBR080C RIM15P43565 1770 aa3.88□□□□□ -1.79
SEC18YBR080C YHR138CP38841 114 aaPredicted RBP3.88□□□□□ -1.79
SEC18YBR080C EMC6Q12431 108 aa3.88□□□□□ -1.79
SEC18YBR080C MRPS9P38120 278 aa3.88□□□□□ -1.79
SEC18YBR080C YBR013CP38215 129 aa3.88□□□□□ -1.79
SEC18YBR080C GCV3P39726 170 aaPredicted RBP3.88□□□□□ -1.79
SEC18YBR080C YCR085WP25650 117 aa3.87□□□□□ -1.79
SEC18YBR080C YLR363W-AQ3E747 85 aa3.87□□□□□ -1.79
SEC18YBR080C MHF1Q3E835 90 aa3.87□□□□□ -1.79
SEC18YBR080C SUS1Q6WNK7 96 aa3.87□□□□□ -1.79
SEC18YBR080C RPS22AP0C0W1 130 aaKnown RBP3.87□□□□□ -1.79
SEC18YBR080C RPB7P34087 171 aa3.87□□□□□ -1.79
SEC18YBR080C YMR030W-AQ3E760 96 aa3.86□□□□□ -1.79
SEC18YBR080C FIG2P25653 1609 aa3.86□□□□□ -1.79
SEC18YBR080C NRG2P38082 220 aa3.86□□□□□ -1.79
SEC18YBR080C HMRA2P0CY13 119 aa3.85□□□□□ -1.79
SEC18YBR080C SRX1P36077 127 aa3.85□□□□□ -1.79
SEC18YBR080C FLO1P32768 1537 aa3.85□□□□□ -1.79
SEC18YBR080C QCR8P08525 94 aa3.84□□□□□ -1.79
SEC18YBR080C RGM1Q00453 211 aa3.84□□□□□ -1.79
SEC18YBR080C ICY1Q04329 127 aa3.84□□□□□ -1.79
SEC18YBR080C CDC39P25655 2108 aaKnown RBP3.84□□□□□ -1.79
SEC18YBR080C RPA12P32529 125 aaKnown RBP3.84□□□□□ -1.79
SEC18YBR080C YMR175W-AQ3E766 64 aa3.83□□□□□ -1.8
SEC18YBR080C RIF1P29539 1916 aa3.83□□□□□ -1.8
SEC18YBR080C YJL144WP47009 104 aa3.83□□□□□ -1.8
SEC18YBR080C HPA2Q06592 156 aa3.83□□□□□ -1.8
SEC18YBR080C RDS3Q06835 107 aaPredicted RBP3.83□□□□□ -1.8
SEC18YBR080C MHF2Q3E829 80 aa3.82□□□□□ -1.8
SEC18YBR080C GSC2P40989 1895 aa3.82□□□□□ -1.8
SEC18YBR080C RPL36BO14455 100 aaKnown RBP3.82□□□□□ -1.8
SEC18YBR080C RPL36AP05745 100 aaPredicted RBP3.82□□□□□ -1.8
SEC18YBR080C YFR010W-AP0C5N0 62 aa3.82□□□□□ -1.8
SEC18YBR080C YHR022CP38763 256 aa3.82□□□□□ -1.8
SEC18YBR080C SWM2P40342 146 aa3.82□□□□□ -1.8
SEC18YBR080C RPS22BQ3E7Y3 130 aaKnown RBP3.82□□□□□ -1.8
SEC18YBR080C SOD1P00445 154 aaKnown RBP3.81□□□□□ -1.8
SEC18YBR080C YLR285C-AQ3E771 56 aa3.81□□□□□ -1.8
SEC18YBR080C MET31Q03081 177 aa3.81□□□□□ -1.8
SEC18YBR080C YJL197C-AP0C5P0 93 aa3.79□□□□□ -1.8
SEC18YBR080C RSM18P40033 138 aa3.79□□□□□ -1.8
SEC18YBR080C ENV10Q99382 181 aa3.79□□□□□ -1.8
SEC18YBR080C AIM4P38305 123 aaPredicted RBP3.79□□□□□ -1.8
SEC18YBR080C IMP2P46972 177 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms