RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W YMR175W-AQ3E766 64 aa3.74□□□□□ -1.81
SHP1YBL058W ADH2P00331 348 aaKnown RBP3.73□□□□□ -1.81
SHP1YBL058W YKR070WP36151 352 aaKnown RBP3.73□□□□□ -1.81
SHP1YBL058W PET8P38921 284 aa3.73□□□□□ -1.81
SHP1YBL058W YAR029WP39549 74 aa3.73□□□□□ -1.81
SHP1YBL058W SDS23P53172 527 aa3.73□□□□□ -1.81
SHP1YBL058W POM33Q12164 279 aa3.73□□□□□ -1.81
SHP1YBL058W YLR118CQ12354 227 aa3.73□□□□□ -1.81
SHP1YBL058W FMP16Q12497 93 aa3.73□□□□□ -1.81
SHP1YBL058W YNR034W-AQ3E841 98 aa3.73□□□□□ -1.81
SHP1YBL058W YJR146WP47174 117 aa3.72□□□□□ -1.81
SHP1YBL058W DAN1P47178 298 aa3.72□□□□□ -1.81
SHP1YBL058W YLR112WQ12130 139 aa3.72□□□□□ -1.81
SHP1YBL058W ATP14Q12349 124 aa3.72□□□□□ -1.81
SHP1YBL058W TRP1P00912 224 aa3.71□□□□□ -1.82
SHP1YBL058W RPL23AP0CX41 137 aaKnown RBP3.71□□□□□ -1.82
SHP1YBL058W RPL23BP0CX42 137 aaKnown RBP3.71□□□□□ -1.82
SHP1YBL058W YEL008WP40001 126 aa3.71□□□□□ -1.82
SHP1YBL058W UBC12P52491 188 aa3.71□□□□□ -1.82
SHP1YBL058W YGL041C-BQ3E750 60 aa3.71□□□□□ -1.82
SHP1YBL058W ECM12O13529 151 aa3.7□□□□□ -1.82
SHP1YBL058W HYP2P23301 157 aaKnown RBP3.7□□□□□ -1.82
SHP1YBL058W LDS1P31379 325 aa3.7□□□□□ -1.82
SHP1YBL058W EOS1P53938 366 aa3.7□□□□□ -1.82
SHP1YBL058W YCL021W-AQ96VH3 125 aa3.7□□□□□ -1.82
SHP1YBL058W NTF2P33331 125 aaKnown RBP3.69□□□□□ -1.82
SHP1YBL058W YKL070WP36087 169 aa3.69□□□□□ -1.82
SHP1YBL058W DAD2P36162 133 aa3.69□□□□□ -1.82
SHP1YBL058W HSP10P38910 106 aa3.69□□□□□ -1.82
SHP1YBL058W VTC1P40046 129 aaRIP-Chip data3.69□□□□□ -1.82not detected
SHP1YBL058W FSF1Q12029 327 aaKnown RBP3.69□□□□□ -1.82
SHP1YBL058W HAC1P41546 238 aa3.68□□□□□ -1.82
SHP1YBL058W APS2Q00381 147 aa3.68□□□□□ -1.82
SHP1YBL058W YDL241WQ07738 123 aa3.68□□□□□ -1.82
SHP1YBL058W PFY1P07274 126 aa3.67□□□□□ -1.82
SHP1YBL058W PRE1P22141 198 aaKnown RBP3.67□□□□□ -1.82
SHP1YBL058W ARO2P28777 376 aaKnown RBP3.67□□□□□ -1.82
SHP1YBL058W YMR295CQ03559 197 aa3.67□□□□□ -1.82
SHP1YBL058W TPT1Q12272 230 aaKnown RBP3.67□□□□□ -1.82
SHP1YBL058W SRB6P32570 121 aa3.66□□□□□ -1.82
SHP1YBL058W RPF1P38805 295 aaKnown RBP3.66□□□□□ -1.82
SHP1YBL058W MGR2Q02889 113 aa3.66□□□□□ -1.82
SHP1YBL058W WIP1Q2V2P8 89 aa3.66□□□□□ -1.82
SHP1YBL058W YPR014CQ6B0W2 109 aa3.66□□□□□ -1.82
SHP1YBL058W YAL065CO13511 128 aa3.65□□□□□ -1.83
SHP1YBL058W NHP6AP11632 93 aaKnown RBP3.65□□□□□ -1.83
SHP1YBL058W TOS6P48560 102 aa3.65□□□□□ -1.83
SHP1YBL058W YOP1Q12402 180 aa3.65□□□□□ -1.83
SHP1YBL058W YOR008C-AQ3E7B9 74 aa3.65□□□□□ -1.83
SHP1YBL058W SEC4P07560 215 aaKnown RBP3.64□□□□□ -1.83
SHP1YBL058W APS1P35181 156 aa3.64□□□□□ -1.83
SHP1YBL058W CWP2P43497 92 aa3.64□□□□□ -1.83
SHP1YBL058W YGL149WP53116 101 aa3.64□□□□□ -1.83
SHP1YBL058W YIL014C-AQ02598 104 aa3.64□□□□□ -1.83
SHP1YBL058W PKR1Q03880 122 aaKnown RBP3.63□□□□□ -1.83
SHP1YBL058W YCR024C-BQ3E7Z8 88 aa3.63□□□□□ -1.83
SHP1YBL058W STF1P01098 86 aa3.62□□□□□ -1.83
SHP1YBL058W POR1P04840 283 aaKnown RBP3.62□□□□□ -1.83
SHP1YBL058W ADH3P07246 375 aaKnown RBP3.62□□□□□ -1.83
SHP1YBL058W PAU19P0CE85 124 aa3.62□□□□□ -1.83
SHP1YBL058W PAU21P0CE86 164 aa3.62□□□□□ -1.83
SHP1YBL058W PAU22P0CE87 164 aa3.62□□□□□ -1.83
SHP1YBL058W PAU3P25610 124 aa3.62□□□□□ -1.83
SHP1YBL058W PAU15P40585 124 aa3.62□□□□□ -1.83
SHP1YBL058W YFL019CP43576 117 aa3.61□□□□□ -1.83
SHP1YBL058W AQY2P0CD90 149 aa3.6□□□□□ -1.83
SHP1YBL058W HMRA2P0CY13 119 aa3.6□□□□□ -1.83
SHP1YBL058W VMA21P41806 77 aa3.6□□□□□ -1.83
SHP1YBL058W CMC4Q3E7A9 73 aa3.6□□□□□ -1.83
SHP1YBL058W RPS22BQ3E7Y3 130 aaKnown RBP3.59□□□□□ -1.83
SHP1YBL058W Q0032Q9ZZX7 96 aa3.59□□□□□ -1.83
SHP1YBL058W YLR156WP0CE96 114 aa3.58□□□□□ -1.84
SHP1YBL058W YLR159WP0CE97 114 aa3.58□□□□□ -1.84
SHP1YBL058W YLR161WP0CE98 114 aa3.58□□□□□ -1.84
SHP1YBL058W CNB1P25296 175 aa3.58□□□□□ -1.84
SHP1YBL058W YGL193CP53097 103 aa3.58□□□□□ -1.84
SHP1YBL058W SMD1Q02260 146 aaPredicted RBP3.58□□□□□ -1.84
SHP1YBL058W COA3Q3E7B2 85 aa3.58□□□□□ -1.84
SHP1YBL058W RPL31AP0C2H8 113 aaKnown RBP3.57□□□□□ -1.84
SHP1YBL058W ATP15P21306 62 aa3.57□□□□□ -1.84
SHP1YBL058W PAU16P35994 123 aa3.57□□□□□ -1.84
SHP1YBL058W ATG8P38182 117 aaRIP-Chip data3.57□□□□□ -1.84not detected
SHP1YBL058W COX14P39103 70 aa3.57□□□□□ -1.84
SHP1YBL058W OXA1P39952 402 aa3.57□□□□□ -1.84
SHP1YBL058W IGD1P43598 195 aa3.57□□□□□ -1.84
SHP1YBL058W YDR042CQ03205 200 aa3.57□□□□□ -1.84
SHP1YBL058W ERV14P53173 138 aa3.56□□□□□ -1.84
SHP1YBL058W PPT2Q12036 173 aa3.56□□□□□ -1.84
SHP1YBL058W CMC2Q3E7A4 109 aa3.56□□□□□ -1.84
SHP1YBL058W TOA2P32774 122 aa3.55□□□□□ -1.84
SHP1YBL058W YBL039W-BP0C268 59 aa3.54□□□□□ -1.84
SHP1YBL058W UBC4P15731 148 aa3.54□□□□□ -1.84
SHP1YBL058W MVB12P42939 101 aa3.54□□□□□ -1.84
SHP1YBL058W KNH1P50112 268 aa3.54□□□□□ -1.84
SHP1YBL058W ABF2Q02486 183 aa3.54□□□□□ -1.84
SHP1YBL058W YOR268CQ08734 132 aa3.54□□□□□ -1.84
SHP1YBL058W KTI11Q3E840 82 aa3.53□□□□□ -1.84
SHP1YBL058W YER039C-AP0CD97 72 aa3.52□□□□□ -1.85
SHP1YBL058W CPR1P14832 162 aaKnown RBP3.52□□□□□ -1.85
SHP1YBL058W YCR007CP25354 239 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms