RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W RAD6P06104 172 aa5.63□□□□□ -1.51
TOD6YBL054W SED1Q01589 338 aa5.63□□□□□ -1.51
TOD6YBL054W ERF2Q06551 359 aa5.63□□□□□ -1.51
TOD6YBL054W PBP4Q07362 185 aaKnown RBP5.63□□□□□ -1.51
TOD6YBL054W YDR119W-AQ2V2P9 66 aa5.63□□□□□ -1.51
TOD6YBL054W RPL18AP0CX49 186 aaKnown RBP5.62□□□□□ -1.51
TOD6YBL054W RPL18BP0CX50 186 aaKnown RBP5.62□□□□□ -1.51
TOD6YBL054W LCB3P47013 409 aa5.62□□□□□ -1.51
TOD6YBL054W YNL190WP53872 204 aa5.62□□□□□ -1.51
TOD6YBL054W COX12Q01519 83 aa5.62□□□□□ -1.51
TOD6YBL054W POR2P40478 281 aa5.61□□□□□ -1.51
TOD6YBL054W DCV1P43595 202 aa5.61□□□□□ -1.51
TOD6YBL054W YGR045CP53229 120 aa5.61□□□□□ -1.51
TOD6YBL054W YDR034W-BQ6Q5X2 51 aa5.61□□□□□ -1.51
TOD6YBL054W YCL021W-AQ96VH3 125 aa5.61□□□□□ -1.51
TOD6YBL054W HFA1P32874 2273 aa5.61□□□□□ -1.51
TOD6YBL054W YHR139C-AO13536 103 aa5.6□□□□□ -1.51
TOD6YBL054W VMA11P32842 164 aa5.6□□□□□ -1.51
TOD6YBL054W YCH1P42937 148 aa5.6□□□□□ -1.51
TOD6YBL054W YNL046WP53956 172 aa5.6□□□□□ -1.51
TOD6YBL054W COF1Q03048 143 aaKnown RBP5.6□□□□□ -1.51
TOD6YBL054W CSF1Q12150 2958 aa5.6□□□□□ -1.51
TOD6YBL054W IRA2P19158 3079 aa5.6□□□□□ -1.51
TOD6YBL054W LDB16P25587 256 aa5.59□□□□□ -1.51
TOD6YBL054W AIM19P40502 157 aa5.59□□□□□ -1.51
TOD6YBL054W SGN1P40561 250 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
TOD6YBL054W YGR219WP53307 113 aa5.59□□□□□ -1.51
TOD6YBL054W MRPS12P53732 153 aa5.59□□□□□ -1.51
TOD6YBL054W INO2P26798 304 aa5.59□□□□□ -1.52
TOD6YBL054W RTG1P32607 177 aa5.59□□□□□ -1.52
TOD6YBL054W MRPL24P36525 258 aaPredicted RBP5.59□□□□□ -1.52
TOD6YBL054W MIC12P38341 106 aa5.59□□□□□ -1.52
TOD6YBL054W YER121WP40076 114 aa5.59□□□□□ -1.52
TOD6YBL054W PEX17P40155 199 aa5.59□□□□□ -1.52
TOD6YBL054W YJR146WP47174 117 aa5.59□□□□□ -1.52
TOD6YBL054W YGR025WP53216 100 aa5.59□□□□□ -1.52
TOD6YBL054W PBI2P0CT04 75 aaKnown RBP5.58□□□□□ -1.52
TOD6YBL054W RPL16AP26784 199 aaKnown RBP5.58□□□□□ -1.52
TOD6YBL054W YOL085CQ99345 113 aa5.58□□□□□ -1.52
TOD6YBL054W YLR415CO13578 112 aa5.57□□□□□ -1.52
TOD6YBL054W IES6P32617 166 aa5.57□□□□□ -1.52
TOD6YBL054W YIL059CP40520 121 aa5.57□□□□□ -1.52
TOD6YBL054W WWM1P43582 211 aaKnown RBP5.57□□□□□ -1.52
TOD6YBL054W YDR381C-AQ3E6R5 114 aa5.57□□□□□ -1.52
TOD6YBL054W YBR200W-AQ3E755 54 aa5.57□□□□□ -1.52
TOD6YBL054W SMP1P38128 452 aa5.56□□□□□ -1.52
TOD6YBL054W YHL042WP38729 150 aa5.56□□□□□ -1.52
TOD6YBL054W KEG1P43614 200 aa5.56□□□□□ -1.52
TOD6YBL054W KNH1P50112 268 aa5.56□□□□□ -1.52
TOD6YBL054W YDR029WQ12111 104 aa5.56□□□□□ -1.52
TOD6YBL054W YCL048W-AQ2V2Q2 79 aa5.56□□□□□ -1.52
TOD6YBL054W YHL037CP38733 133 aa5.55□□□□□ -1.52
TOD6YBL054W YHR022CP38763 256 aa5.55□□□□□ -1.52
TOD6YBL054W PBA1Q05778 276 aa5.55□□□□□ -1.52
TOD6YBL054W ECM12O13529 151 aa5.55□□□□□ -1.52
TOD6YBL054W CAX4P53223 239 aa5.55□□□□□ -1.52
TOD6YBL054W TRP1P00912 224 aa5.54□□□□□ -1.52
TOD6YBL054W RPL15AP05748 204 aaKnown RBP5.54□□□□□ -1.52
TOD6YBL054W SHU1P38751 150 aa5.54□□□□□ -1.52
TOD6YBL054W HUR1P45820 110 aa5.54□□□□□ -1.52
TOD6YBL054W BNA1P47096 177 aa5.53□□□□□ -1.52
TOD6YBL054W YPL038W-AQ3E7B4 63 aa5.52□□□□□ -1.53
TOD6YBL054W RPL16BP26785 198 aaKnown RBP5.51□□□□□ -1.53
TOD6YBL054W MPC2P38857 129 aa5.51□□□□□ -1.53
TOD6YBL054W CCW12Q12127 133 aa5.51□□□□□ -1.53
TOD6YBL054W YER039C-AP0CD97 72 aa5.5□□□□□ -1.53
TOD6YBL054W YLR042CQ07990 161 aa5.5□□□□□ -1.53
TOD6YBL054W EMC6Q12431 108 aa5.5□□□□□ -1.53
TOD6YBL054W QCR8P08525 94 aa5.5□□□□□ -1.53
TOD6YBL054W TOM6P33448 61 aa5.5□□□□□ -1.53
TOD6YBL054W YBR209WP38311 105 aa5.5□□□□□ -1.53
TOD6YBL054W NCE103P53615 221 aa5.5□□□□□ -1.53
TOD6YBL054W SHH4Q06236 168 aa5.5□□□□□ -1.53
TOD6YBL054W MSA2P36157 363 aa5.49□□□□□ -1.53
TOD6YBL054W RRT13P40042 185 aa5.49□□□□□ -1.53
TOD6YBL054W YGL088WP53151 121 aa5.49□□□□□ -1.53
TOD6YBL054W YEL008WP40001 126 aa5.48□□□□□ -1.53
TOD6YBL054W SIM1P40472 476 aa5.48□□□□□ -1.53
TOD6YBL054W RPL2AP0CX45 254 aaKnown RBP5.47□□□□□ -1.53
TOD6YBL054W RPL2BP0CX46 254 aaKnown RBP5.47□□□□□ -1.53
TOD6YBL054W UBC5P15732 148 aa5.47□□□□□ -1.53
TOD6YBL054W YHL018WP38744 120 aaPredicted RBP5.47□□□□□ -1.53
TOD6YBL054W SVP26P38869 228 aa5.47□□□□□ -1.53
TOD6YBL054W YML122CQ03207 126 aa5.46□□□□□ -1.53
TOD6YBL054W PPT2Q12036 173 aa5.46□□□□□ -1.53
TOD6YBL054W YOR011W-AQ3E807 68 aa5.46□□□□□ -1.53
TOD6YBL054W YSY6P38374 65 aa5.46□□□□□ -1.54
TOD6YBL054W SBH2P52871 88 aa5.46□□□□□ -1.54
TOD6YBL054W SUT1P53032 299 aaKnown RBP5.46□□□□□ -1.54
TOD6YBL054W RGM1Q00453 211 aa5.46□□□□□ -1.54
TOD6YBL054W YNL146C-AQ3E7Z1 64 aa5.46□□□□□ -1.54
TOD6YBL054W FMP27Q06179 2628 aa5.45□□□□□ -1.54
TOD6YBL054W STF1P01098 86 aa5.45□□□□□ -1.54
TOD6YBL054W KRE9P39005 276 aa5.45□□□□□ -1.54
TOD6YBL054W ARC15P40518 154 aaRIP-Chip data5.45□□□□□ -1.54not detected
TOD6YBL054W YPR013CQ12145 317 aa5.45□□□□□ -1.54
TOD6YBL054W BPH1P25356 2167 aa5.44□□□□□ -1.54
TOD6YBL054W SAP30P38429 201 aa5.44□□□□□ -1.54
TOD6YBL054W YOR034C-AQ3E735 80 aa5.44□□□□□ -1.54
TOD6YBL054W YER135CP40082 130 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 292.4 ms