RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 NPTXRO95502 500 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CST3P01034 146 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CYP1A2P05177 515 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 KRT19P08727 400 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 UNGP13051 313 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-234ENST00000642041 FGFR4P22455 802 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 PPM1AP35813 382 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 ZNF132P52740 706 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 MYL6P60660 151 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 ARHGAP8P85298 464 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CENPCQ03188 943 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
PHGDH-234ENST00000642041 JADE1Q6IE81 842 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 KCNT2Q6UVM3 1135 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 OTOP3Q7RTS5 596 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 UNC93AQ86WB7 457 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 PHF13Q86YI8 300 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-234ENST00000642041 UBL4BQ8N7F7 174 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 UBR7Q8N806 425 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 KIF12Q96FN5 646 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CPB2Q96IY4 423 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 PI4K2AQ9BTU6 479 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 XYLT2Q9H1B5 865 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 RGS18Q9NS28 235 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CISHQ9NSE2 258 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CAPN6Q9Y6Q1 641 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 CITO14578 2027 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 KRBA1A5PL33 1030 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 MGEA5O60502 916 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 TADA3O75528 432 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 ATP1A1P05023 1023 aaKnown RBP18.2■□□□□ 0.5
PHGDH-234ENST00000642041 OSTNP61366 133 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 NFX1Q12986 1120 aaKnown RBP18.2■□□□□ 0.5
PHGDH-234ENST00000642041 ZBTB6Q15916 424 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 VARS2Q5ST30 1063 aaKnown RBP18.2■□□□□ 0.5
PHGDH-234ENST00000642041 LMBRD2Q68DH5 695 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-234ENST00000642041 ALKAL1Q6UXT8 129 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 DAAM2Q86T65 1068 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 C1orf210Q8IVY1 113 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 C1orf127Q8N9H9 656 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 PGBD4Q96DM1 585 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 OSBPL9Q96SU4 736 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 RTKNQ9BST9 563 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 APOBEC3GQ9HC16 384 aaKnown RBP18.2■□□□□ 0.5
PHGDH-234ENST00000642041 CTTNBP2NLQ9P2B4 639 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 IGSF9Q9P2J2 1179 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 ST3GAL5Q9UNP4 418 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 MYH10P35580 1976 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 FASNP49327 2511 aaKnown RBP18.2■□□□□ 0.5
PHGDH-234ENST00000642041 PTPRJQ12913 1337 aa18.2■□□□□ 0.5
PHGDH-234ENST00000642041 C9IYK1 514 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 BUB1O43683 1085 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 ZNF623O75123 536 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 ERLIN1O75477 346 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 VDRP11473 427 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 CHRNB2P17787 502 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 CDH5P33151 784 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-234ENST00000642041 WDR72Q3MJ13 1102 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 SEZ6Q53EL9 994 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 RSRC2Q7L4I2 434 aaKnown RBP18.19■□□□□ 0.5
PHGDH-234ENST00000642041 DENND4AQ7Z401 1863 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 SPATA18Q8TC71 538 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 ZNF606Q8WXB4 792 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 KAT5Q92993 513 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 ADAM2Q99965 735 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 SPG21Q9NZD8 308 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 NCDNQ9UBB6 729 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 CDV3Q9UKY7 258 aaKnown RBP18.19■□□□□ 0.5
PHGDH-234ENST00000642041 TTC7AQ9ULT0 858 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-234ENST00000642041 GIT1Q9Y2X7 761 aa18.19■□□□□ 0.5
PHGDH-234ENST00000642041 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
PHGDH-234ENST00000642041 ANKRD11Q6UB99 2663 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-234ENST00000642041 TARSL2A2RTX5 802 aaKnown RBP18.18■□□□□ 0.5
PHGDH-234ENST00000642041 DCDC2BA2VCK2 349 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 THAP12O43422 761 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 ABL1P00519 1130 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 ITGB3P05106 788 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
PHGDH-234ENST00000642041 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 LRRC57Q8N9N7 239 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 NCAPGQ9BPX3 1015 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 CARD9Q9H257 536 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 TBC1D17Q9HA65 648 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 ABCB6Q9NP58 842 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 TMEM161AQ9NX61 479 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 DLGAP2Q9P1A6 1054 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 RALYQ9UKM9 306 aaKnown RBP18.18■□□□□ 0.5
PHGDH-234ENST00000642041 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
PHGDH-234ENST00000642041 A0A0U1RQJ8 604 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 CCDC66A2RUB6 948 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 CCDC188H7C350 402 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 ATP8B1O43520 1251 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 NARSO43776 548 aaKnown RBP18.17■□□□□ 0.5
PHGDH-234ENST00000642041 MMEP08473 750 aa18.17■□□□□ 0.5
PHGDH-234ENST00000642041 CFHP08603 1231 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms