RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 CXCL8P10145 99 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 PDIA3P30101 505 aaKnown RBP11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.512e-11■■□□□ 12.7
PTP4A1-207ENST00000639568 GRK6P43250 576 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 PPP2R3AQ06190 1150 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 LY6DQ14210 128 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 DHCR24Q15392 516 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 GAB4Q2WGN9 574 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 ZC2HC1CQ53FD0 456 aaPredicted RBP11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 COLEC12Q5KU26 742 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 BROXQ5VW32 411 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 ADGRG2Q8IZP9 1017 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 TMEM130Q8N3G9 435 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 TMEM176AQ96HP8 235 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 AIFM3Q96NN9 605 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 NFE2L3Q9Y4A8 694 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 BCAT2O15382 392 aaPredicted RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 CYP11A1P05108 521 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 CLTAP09496 248 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 TCF3P15923 654 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 NDUFV2P19404 249 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 PROZP22891 400 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 NTSR1P30989 418 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 ACTN2P35609 894 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 WASP42768 502 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 GPR15P49685 360 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 PEX3P56589 373 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 ATP2C1P98194 919 aaPredicted RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 MESP2Q0VG99 397 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 MYO1EQ12965 1108 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 STRN3Q13033 797 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 PTPRNQ16849 979 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 INAVAQ3KP66 663 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 LRRTM3Q86VH5 581 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 SPACA3Q8IXA5 215 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 LRRC15Q8TF66 581 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 DNASE2BQ8WZ79 361 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 LGMNQ99538 433 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 SEMA4CQ9C0C4 833 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 NRSN2Q9GZP1 204 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 FTSJ1Q9UET6 329 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 BTBD3Q9Y2F9 522 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 HEMK1Q9Y5R4 338 aaPredicted RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 TNRC6BQ9UPQ9 1833 aaKnown RBP11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 PTPRQQ9UMZ3 2332 aa11.85□□□□□ -0.51
PTP4A1-207ENST00000639568 C2orf78A6NCI8 922 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 LEFTY2O00292 366 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 CLDN3O15551 220 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 NEMFO60524 1076 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 MED24O75448 989 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 TADA3O75528 432 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 TOM1L1O75674 476 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 ADH5P11766 374 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 CDK4P11802 303 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 CD6P30203 668 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 TNFSF9P41273 254 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 NPTX2P47972 431 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 GUCY2FP51841 1108 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 UCNP55089 124 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 TARDBPQ13148 414 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 RTP5Q14D33 572 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 ZBTB6Q15916 424 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 DDR2Q16832 855 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 ARHGAP40Q5TG30 622 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 BTBD8Q5XKL5 378 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 ERLEC1Q96DZ1 483 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 MED8Q96G25 268 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 ZBTB45Q96K62 511 aaPredicted RBP11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 JAKMIP1Q96N16 626 aaKnown RBP11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 PTPRBP23467 1997 aa11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 GOLGA4Q13439 2230 aaKnown RBP11.84□□□□□ -0.51
PTP4A1-207ENST00000639568 TTC26A0AVF1 554 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 CYB561D2O14569 222 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 ABLIM1O14639 778 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 PPEF2O14830 753 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 NOL4O94818 638 aa11.83□□□□□ -0.52
PTP4A1-207ENST00000639568 NCAM1P13591 858 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms