RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 PCDHGA5Q9Y5G8 931 aa18.76■□□□□ 0.59
SHKBP1-203ENST00000594298 GOLGA8IPA6NC78 632 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 GOLGA8JA6NMD2 632 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 RHOBTB3O94955 611 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 SMC2O95347 1197 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 TMEM191BP0C7N4 346 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 HOXD13P35453 343 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 STK4Q13043 487 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 KCNB1Q14721 858 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 SURF1Q15526 300 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 PLA2G2CQ5R387 149 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 SYT13Q7L8C5 426 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 KBTBD6Q86V97 674 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 NOC3LQ8WTT2 800 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 FAM84AQ96KN4 292 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 SLC22A12Q96S37 553 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 ARRDC1-AS1Q9H2J1 176 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 INTS13Q9NVM9 706 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 RMND1Q9NWS8 449 aa18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 DUS2Q9NX74 493 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-203ENST00000594298 TULP1O00294 542 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 HCRTO43612 131 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 CKMP06732 381 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 MYO1EQ12965 1108 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 CCDC142Q17RM4 750 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 AASDHQ4L235 1098 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 NAIF1Q69YI7 327 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 VSTM1Q6UX27 236 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 C4orf50Q6ZRC1 276 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 ELOA2Q8IYF1 753 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 C12orf50Q8NA57 414 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 CD101Q93033 1021 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 ANKRD36BP1Q96IX9 119 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 SPATA17Q96L03 361 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 IPO9Q96P70 1041 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 CYP2S1Q96SQ9 504 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 GTPBP4Q9BZE4 634 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 TRPC7Q9HCX4 862 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 AGPAT3Q9NRZ7 376 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 HSPBP1Q9NZL4 362 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 CDH9Q9ULB4 789 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 ARHGAP26Q9UNA1 814 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 TCHHQ07283 1943 aa18.74■□□□□ 0.59
SHKBP1-203ENST00000594298 TM4SF5O14894 197 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 TGFB1I1O43294 461 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 PRR29P0C7W0 189 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 PFKLP17858 780 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 IFNAR2P48551 515 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 PDE6CP51160 858 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 SF3A2Q15428 464 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 MAPRE1Q15691 268 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 EML3Q32P44 896 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 IL31Q6EBC2 164 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 C12orf56Q8IXR9 622 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 ARL14EPQ8N8R7 260 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 XXYLT1Q8NBI6 393 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 KIAA0895Q8NCT3 520 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 RPLP0P6Q8NHW5 317 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 KBTBD7Q8WVZ9 684 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 EZH1Q92800 747 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 HPDLQ96IR7 371 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 EBF1Q9UH73 591 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 R3HCC1Q9Y3T6 440 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 WNT6Q9Y6F9 365 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 PTPRJQ12913 1337 aa18.73■□□□□ 0.59
SHKBP1-203ENST00000594298 C2orf78A6NCI8 922 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 PDXKO00764 312 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 CLIC2O15247 247 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 TNNC2P02585 160 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 UBE2HP62256 183 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 NR1H3Q13133 447 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 DUOXA2Q1HG44 320 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 PLK5Q496M5 336 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 SCN4BQ8IWT1 228 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 KIAA1958Q8N8K9 716 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 OR5B17Q8NGF7 314 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 CCDC26Q8TAB7 109 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 SH3RF2Q8TEC5 729 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 ACDQ96AP0 544 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 GSDMAQ96QA5 445 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 HHIPQ96QV1 700 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 SYT15Q9BQS2 421 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 MAGEC2Q9UBF1 373 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 DENND4CQ5VZ89 1909 aa18.72■□□□□ 0.59
SHKBP1-203ENST00000594298 OBSL1O75147 1896 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 CALUO43852 315 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 ATP2C2O75185 946 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 APBB3O95704 486 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 HDCP19113 662 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 WARSP23381 471 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 LMO2P25791 158 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 MPLP40238 635 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 CYP2J2P51589 502 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 PNOCQ13519 176 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 DMC1Q14565 340 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 CCDC6Q16204 474 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms