RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CYP3A5P20815 502 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 BCKDHBP21953 392 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 LMO2P25791 158 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 CASP1P29466 404 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 UBA7P41226 1012 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 SLC6A11P48066 632 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ZNF131P52739 623 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 NRLP54845 237 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ARHGAP8P85298 464 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 IFRD2Q12894 506 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 USP4Q13107 963 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 RUNX3Q13761 415 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 MYBPC2Q14324 1141 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 LRRC32Q14392 662 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 CSRP2Q16527 193 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ARHGAP29Q52LW3 1261 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ARHGAP15Q53QZ3 475 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 C2orf27AQ580R0 203 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 EMC10Q5UCC4 262 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 FOXD4L5Q5VV16 416 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ARMCX6Q7L4S7 300 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 WDR5BQ86VZ2 330 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 LONP2Q86WA8 852 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 RALGPS2Q86X27 583 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 HOMEZQ8IX15 550 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 DEFB119Q8N690 84 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 OR5B17Q8NGF7 314 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 RLN3Q8WXF3 142 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 FOXD4L4Q8WXT5 416 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 POMGNT1Q8WZA1 660 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 FAM83CQ9BQN1 747 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 CBWD1Q9BRT8 395 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 C8orf33Q9H7E9 229 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 C17orf75Q9HAS0 396 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 TRPV5Q9NQA5 729 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 SMPD4Q9NXE4 827 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 LARSQ9P2J5 1176 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ZNF638Q14966 1978 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 CACNA1EQ15878 2313 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 TCHHQ07283 1943 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 SPAG17Q6Q759 2223 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 ITPR1Q14643 2758 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 KPNA7A9QM74 516 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 LAD1O00515 517 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 ABL1P00519 1130 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 CYP11A1P05108 521 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 GJA4P35212 333 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 AVPR1AP37288 418 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 MCM2P49736 904 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 TAF6P49848 677 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 CACNA2D1P54289 1103 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 GTF2BQ00403 316 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 VEPH1Q14D04 833 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 FOXD4L6Q3SYB3 417 aaPredicted RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 RILPL1Q5EBL4 403 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 TMEM196Q5HYL7 178 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 STPG1Q5TH74 334 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 LARP1BQ659C4 914 aaKnown RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 KIAA1211LQ6NV74 962 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 FOXD4L3Q6VB84 417 aaPredicted RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 ZNF720Q7Z2F6 126 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 METTL23Q86XA0 190 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 CSGALNACT2Q8N6G5 542 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 PDILTQ8N807 584 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 CXorf38Q8TB03 319 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 NETO1Q8TDF5 533 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 SH3RF2Q8TEC5 729 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 LARP4BQ92615 738 aaKnown RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 WBP2Q969T9 261 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 DNAJC19Q96DA6 116 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 CALML4Q96GE6 196 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 FAM126AQ9BYI3 521 aaPredicted RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 MTMR12Q9C0I1 747 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 MRPL44Q9H9J2 332 aaKnown RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 TDP1Q9NUW8 608 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 TMEM30AQ9NV96 361 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 DUS2Q9NX74 493 aaKnown RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 DDX43Q9NXZ2 648 aaKnown RBP7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 SIX4Q9UIU6 781 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 SLC8A2Q9UPR5 921 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 SMC3Q9UQE7 1217 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 SNX9Q9Y5X1 595 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 BPTFQ12830 3046 aa7.35□□□□□ -1.23
PRPF40B-214ENST00000551320 MYOFQ9NZM1 2061 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 ATXN2Q99700 1313 aaKnown RBP7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 C4orf47A7E2U8 309 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 C1QTNF9BB2RNN3 333 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CLDN5O00501 218 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 TRIM24O15164 1050 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 LILRA1O75019 489 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 GCNT3O95395 438 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 CKMP06732 381 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 C1QTNF9P0C862 333 aa7.34□□□□□ -1.23
PRPF40B-214ENST00000551320 IDEP14735 1019 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms