RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 PCBP1Q15365 356 aaKnown RBP eCLIP5.99□□□□□ -1.45
CHKA-204ENST00000528235 PLK5Q496M5 336 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 C8orf34Q49A92 452 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 BEND4Q6ZU67 534 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 HAUS6Q7Z4H7 955 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 RALGPS2Q86X27 583 aaPredicted RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 REXO1Q8N1G1 1221 aaKnown RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 CAMKK1Q8N5S9 505 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 C1orf127Q8N9H9 656 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 RNF149Q8NC42 400 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 RDM1Q8NG50 284 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 TTC8Q8TAM2 541 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 ZSCAN18Q8TBC5 510 aaPredicted RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 HNRNPLLQ8WVV9 542 aaKnown RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 TCP11Q8WWU5 503 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 PRPF31Q8WWY3 499 aaKnown RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 TMEM143Q96AN5 459 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 TCEAL4Q96EI5 215 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 ZNF512Q96ME7 567 aaPredicted RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 RIT2Q99578 217 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 PAAF1Q9BRP4 392 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 RUSC1Q9BVN2 902 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 GPR88Q9GZN0 384 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 DUSP15Q9H1R2 295 aaPredicted RBP5.99□□□□□ -1.45
CHKA-204ENST00000528235 UNC45AQ9H3U1 944 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 MINDY3Q9H8M7 445 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 C6orf50Q9HD87 102 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 C2orf42Q9NWW7 574 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 BARHL2Q9NY43 387 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 CACNG4Q9UBN1 327 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 SEPT3Q9UH03 358 aa5.99□□□□□ -1.45
CHKA-204ENST00000528235 MYO18AQ92614 2054 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 MYH11P35749 1972 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 GOLGA4Q13439 2230 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 LAMA5O15230 3695 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ARHGEF37A1IGU5 675 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 BCLAF3A2AJT9 711 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 MYBPHLA2RUH7 354 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 PPP1R12AO14974 1030 aaPredicted RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 MSH4O15457 936 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 TRAPPC3O43617 180 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 EXTL3O43909 919 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 TSPAN1O60635 241 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 NPTXRO95502 500 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 THP07101 528 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 FAM200BP0CF97 657 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 SETSIPP0DME0 302 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 MYL4P12829 197 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 MZF1P28698 734 aaPredicted RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 GNA11P29992 359 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 HOXC13P31276 330 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ARPP19P56211 112 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 PSMC5P62195 406 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 SIM1P81133 766 aaPredicted RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 PTH1RQ03431 593 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 TFDP1Q14186 410 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 PTPAQ15257 358 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ARHGAP29Q52LW3 1261 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ZFYVE27Q5T4F4 411 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 PLA2G4FQ68DD2 849 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 KLHL10Q6JEL2 608 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ALKBH2Q6NS38 261 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 SLC27A1Q6PCB7 646 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ANKS3Q6ZW76 656 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 GSTCDQ8NEC7 633 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ZNF461Q8TAF7 563 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 EXOC6Q8TAG9 804 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 CCDC12Q8WUD4 166 aaPredicted RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 CRYGNQ8WXF5 182 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 LRIG1Q96JA1 1093 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 CEP170P1Q96L14 293 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ZSWIM3Q96MP5 696 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 CEP89Q96ST8 783 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 NXF3Q9H4D5 531 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 CCDC86Q9H6F5 360 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 CYP4F11Q9HBI6 524 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 METTL14Q9HCE5 456 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 MTRRQ9UBK8 725 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 KIF3AQ9Y496 699 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 PAXBP1Q9Y5B6 917 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 OAS3Q9Y6K5 1087 aaKnown RBP5.98□□□□□ -1.45
CHKA-204ENST00000528235 MYH10P35580 1976 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 CACNA1EQ15878 2313 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ASXL3Q9C0F0 2248 aa5.98□□□□□ -1.45
CHKA-204ENST00000528235 ZMYM2Q9UBW7 1377 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 SPAARA0A1B0GVQ0 90 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 MEGF11A6BM72 1044 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 PRR19A6NJB7 356 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 TULP2O00295 520 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 DYNC1I1O14576 645 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 CDX4O14627 284 aaPredicted RBP5.97□□□□□ -1.45
CHKA-204ENST00000528235 EIF4EBP3O60516 100 aaPredicted RBP5.97□□□□□ -1.45
CHKA-204ENST00000528235 STBD1O95210 358 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 WNT11O96014 354 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 PDGFAP04085 211 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 GJA1P17302 382 aa5.97□□□□□ -1.45
CHKA-204ENST00000528235 ARF4P18085 180 aaPredicted RBP5.97□□□□□ -1.45
CHKA-204ENST00000528235 CIITAP33076 1130 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms