RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 STK3Q13188 491 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 NOLC1Q14978 699 aaKnown RBP eCLIP16.41■□□□□ 0.22
U2AF1-211ENST00000486519 HSF5Q4G112 596 aaPredicted RBP16.41■□□□□ 0.22
U2AF1-211ENST00000486519 LRRC69Q6ZNQ3 347 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 SPPL2BQ8TCT7 592 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 KCNB2Q92953 911 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 ACOX2Q99424 681 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 NAP1L4Q99733 375 aaKnown RBP16.41■□□□□ 0.22
U2AF1-211ENST00000486519 TMEM134Q9H6X4 195 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 ARHGEF4Q9NR80 690 aa16.41■□□□□ 0.22
U2AF1-211ENST00000486519 UBQLN1Q9UMX0 589 aaKnown RBP16.41■□□□□ 0.22
U2AF1-211ENST00000486519 A0A0A0MRY4 1105 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 B8ZZF3 427 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 LEFTY2O00292 366 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 SLC16A4O15374 487 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
U2AF1-211ENST00000486519 NOL4O94818 638 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
U2AF1-211ENST00000486519 TLE3Q04726 772 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 MAPK7Q13164 816 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 HLA-BQ31612 363 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 TAF1BQ53T94 588 aaPredicted RBP16.4■□□□□ 0.22
U2AF1-211ENST00000486519 WSCD1Q658N2 575 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 RHBDF2Q6PJF5 856 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 ADGRG2Q8IZP9 1017 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 SPATA18Q8TC71 538 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 ARID3AQ99856 593 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 FAM124BQ9H5Z6 455 aaPredicted RBP16.4■□□□□ 0.22
U2AF1-211ENST00000486519 GMIPQ9P107 970 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 ARHGAP26Q9UNA1 814 aa16.4■□□□□ 0.22
U2AF1-211ENST00000486519 USP9XQ93008 2570 aaPredicted RBP16.39■□□□□ 0.22
U2AF1-211ENST00000486519 MYMKA6NI61 221 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 NEMFO60524 1076 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 CSH1P0DML2 217 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 CSH2P0DML3 217 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 HOXB2P14652 356 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 TCF3P15923 654 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 CYP3A5P20815 502 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 CYP2F1P24903 491 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 RESTQ13127 1097 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 C9orf57Q5W0N0 161 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 KIFAP3Q92845 792 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 CDC6Q99741 560 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 BHMT2Q9H2M3 363 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 RAD54BQ9Y620 910 aa16.39■□□□□ 0.21
U2AF1-211ENST00000486519 ZNF883P0CG24 379 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 HDCP19113 662 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 MATKP42679 507 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
U2AF1-211ENST00000486519 COLEC12Q5KU26 742 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 SPATA1Q5VX52 437 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 EGFLAMQ63HQ2 1017 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
U2AF1-211ENST00000486519 ZNF513Q8N8E2 541 aaPredicted RBP16.38■□□□□ 0.21
U2AF1-211ENST00000486519 NAT16Q8N8M0 369 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 MYRFLQ96LU7 910 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 TRIM4Q9C037 500 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 ZDHHC5Q9C0B5 715 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 MIR1-1HGQ9H1L0 117 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 SUSD2Q9UGT4 822 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 PCDHB5Q9Y5E4 795 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 TEX15Q9BXT5 2789 aa16.38■□□□□ 0.21
U2AF1-211ENST00000486519 A0A1B0GTW7 788 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 ERVH48-1M5A8F1 160 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 CBX4O00257 560 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 PIRO00625 290 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 CYB561D2O14569 222 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 KCNK3O14649 394 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 CPLX1O14810 134 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 FLRT2O43155 660 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 HCRTO43612 131 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 SLC28A2O43868 658 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 FAM189A1O60320 539 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 HIP1RO75146 1068 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 TOM1L1O75674 476 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 NFICP08651 508 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 GNSP15586 552 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 RPA1P27694 616 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 GRIA2P42262 883 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 TNFRSF4P43489 277 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 MCL1Q07820 350 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
U2AF1-211ENST00000486519 JADE1Q6IE81 842 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 SPACA3Q8IXA5 215 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 SNIP1Q8TAD8 396 aaKnown RBP16.37■□□□□ 0.21
U2AF1-211ENST00000486519 C2orf15Q8WU43 125 aaKnown RBP16.37■□□□□ 0.21
U2AF1-211ENST00000486519 DNASE2BQ8WZ79 361 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 TRMT2BQ96GJ1 504 aaKnown RBP16.37■□□□□ 0.21
U2AF1-211ENST00000486519 PYM1Q9BRP8 204 aaKnown RBP16.37■□□□□ 0.21
U2AF1-211ENST00000486519 RNF38Q9H0F5 515 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 PLEKHA5Q9HAU0 1116 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 SMPD4Q9NXE4 827 aa16.37■□□□□ 0.21
U2AF1-211ENST00000486519 A0A1B0GVT2 93 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 ANO9A1A5B4 782 aa16.36■□□□□ 0.21
U2AF1-211ENST00000486519 E9PAM4 449 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms