RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PPP3CCP48454 512 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 IFNAR2P48551 515 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 FNTBP49356 437 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 PDE6CP51160 858 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 GALK1P51570 392 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 USP46P62068 366 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
NUP50-215ENST00000484186 KRT85P78386 507 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 DMWDQ09019 674 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 USP4Q13107 963 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 KCNB1Q14721 858 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 TDRD10Q5VZ19 366 aaKnown RBP10.05□□□□□ -0.8
NUP50-215ENST00000484186 FSTL4Q6MZW2 842 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 LONP2Q86WA8 852 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 CPA6Q8N4T0 437 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 TTC16Q8NEE8 873 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 SH3RF2Q8TEC5 729 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 EXOC4Q96A65 974 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 RMDN1Q96DB5 314 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 CHFRQ96EP1 664 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 DPEP3Q9H4B8 488 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 C2orf42Q9NWW7 574 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 GMEB2Q9UKD1 530 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 RAB23Q9ULC3 237 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 OTOGLQ3ZCN5 2332 aa10.05□□□□□ -0.8
NUP50-215ENST00000484186 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ZNF840PA6NDX5 716 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 CLDN5O00501 218 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ATG13O75143 517 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 KIF20AO95235 890 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 VNN1O95497 513 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 NR3C1P04150 777 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 RPN1P04843 607 aaKnown RBP10.04□□□□□ -0.8
NUP50-215ENST00000484186 DRD1P21728 446 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 NDUFA8P51970 172 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 CDH8P55286 799 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 DLG4P78352 724 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 NR1H3Q13133 447 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 NCOA4Q13772 614 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 SIM2Q14190 667 aaPredicted RBP10.04□□□□□ -0.8
NUP50-215ENST00000484186 PUM1Q14671 1186 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUP50-215ENST00000484186 SGSM1Q2NKQ1 1148 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ZNF699Q32M78 642 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 EML3Q32P44 896 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ZNF667Q5HYK9 610 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 HEATR6Q6AI08 1181 aaKnown RBP10.04□□□□□ -0.8
NUP50-215ENST00000484186 LAIR1Q6GTX8 287 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 PRR23BQ6ZRT6 265 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 WDR5BQ86VZ2 330 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 CHAMP1Q96JM3 812 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 P2RY13Q9BPV8 354 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 B3GNT5Q9BYG0 378 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ZNF518BQ9C0D4 1074 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ELOVL4Q9GZR5 314 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 LINC00597Q9H2U6 94 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 FBRSL1Q9HCM7 1045 aaKnown RBP10.04□□□□□ -0.8
NUP50-215ENST00000484186 ARHGAP26Q9UNA1 814 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 TRAF3IP3Q9Y228 551 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 WNT6Q9Y6F9 365 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 ZNF638Q14966 1978 aaKnown RBP10.04□□□□□ -0.8
NUP50-215ENST00000484186 OBSL1O75147 1896 aa10.04□□□□□ -0.8
NUP50-215ENST00000484186 KIF26AQ9ULI4 1882 aaPredicted RBP10.04□□□□□ -0.8
NUP50-215ENST00000484186 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SPTBN4Q9H254 2564 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 LEFTY2O00292 366 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 IKBKBO14920 756 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 CALUO43852 315 aaPredicted RBP10.03□□□□□ -0.8
NUP50-215ENST00000484186 RHOBTB3O94955 611 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 CLSTN1O94985 981 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 ABL1P00519 1130 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 EGFP01133 1207 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 RETP07949 1114 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 P4HA1P13674 534 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 TGM1P22735 817 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 RAP1GAPP47736 663 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 CACNA2D1P54289 1103 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SLC7A9P82251 487 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 ZXDBP98169 803 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 TAF10Q12962 218 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 LPAL2Q16609 132 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 RSPO4Q2I0M5 234 aaPredicted RBP10.03□□□□□ -0.8
NUP50-215ENST00000484186 FBXO43Q4G163 708 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 PKN3Q6P5Z2 889 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 NUP93Q8N1F7 819 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 CD101Q93033 1021 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 CCDC47Q96A33 483 aaKnown RBP10.03□□□□□ -0.8
NUP50-215ENST00000484186 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SLITRK1Q96PX8 696 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SCAND2PQ9GZW5 306 aaPredicted RBP10.03□□□□□ -0.8
NUP50-215ENST00000484186 RNF38Q9H0F5 515 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SMYD3Q9H7B4 428 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 TMEM30AQ9NV96 361 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 DLL3Q9NYJ7 618 aa10.03□□□□□ -0.8
NUP50-215ENST00000484186 SLC8A2Q9UPR5 921 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms