RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 ATICP31939 592 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 PPP3CCP48454 512 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 SRSF5Q13243 272 aaKnown RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 TRPC3Q13507 836 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 KNOP1Q1ED39 458 aaKnown RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 WDR72Q3MJ13 1102 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 FOXD4L6Q3SYB3 417 aaPredicted RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 FOXD4L3Q6VB84 417 aaPredicted RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 CEP57L1Q8IYX8 460 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 ARL14EPQ8N8R7 260 aaPredicted RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 OR6B3Q8NGW1 331 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 SH3RF2Q8TEC5 729 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 SYAP1Q96A49 352 aaPredicted RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 CYP2S1Q96SQ9 504 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 MRPL45Q9BRJ2 306 aaKnown RBP20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 RTKNQ9BST9 563 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 TTLL2Q9BWV7 592 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 ELOVL4Q9GZR5 314 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 SLC39A2Q9NP94 309 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 TRPM5Q9NZQ8 1165 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 SLC8A2Q9UPR5 921 aa20.79■□□□□ 0.92
R3HDM1-215ENST00000483021 EML5Q05BV3 1969 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 C2orf78A6NCI8 922 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 EXOC3O60645 756 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 RNF40O75150 1001 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 EGFP01133 1207 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 CASP1P29466 404 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 AFMP43652 599 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 NOP14P78316 857 aaKnown RBP20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 NR1H3Q13133 447 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 EML3Q32P44 896 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 MDH1BQ5I0G3 518 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 PKN3Q6P5Z2 889 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 TTC16Q8NEE8 873 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 C8orf48Q96LL4 319 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 WNT6Q9Y6F9 365 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 SPTBN2O15020 2390 aa20.78■□□□□ 0.92
R3HDM1-215ENST00000483021 F8VP50 259 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 NFATC1O95644 943 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 GALK1P51570 392 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 AP3M2P53677 418 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 ATXN1P54253 815 aaKnown RBP20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 CUL4BQ13620 913 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 CSRP2Q16527 193 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 CAMKK1Q8N5S9 505 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 KIAA1958Q8N8K9 716 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 CCDC26Q8TAB7 109 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 NETO1Q8TDF5 533 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 GAB3Q8WWW8 586 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 CD101Q93033 1021 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 SEMA4GQ9NTN9 838 aa20.77■□□□□ 0.92
R3HDM1-215ENST00000483021 PHACTR2O75167 634 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 AKAP3O75969 853 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 PTPN1P18031 435 aaKnown RBP20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 USP46P62068 366 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 FAM160A2Q8N612 972 aaPredicted RBP20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 ACDQ96AP0 544 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 SLITRK1Q96PX8 696 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 VRTNQ9H8Y1 702 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 NME7Q9Y5B8 376 aa20.76■□□□□ 0.91
R3HDM1-215ENST00000483021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 A8MXQ7 604 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 RPP40O75818 363 aaKnown RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 SLFN14P0C7P3 912 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 MYL6P60660 151 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 BIRC3Q13489 604 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 TDRD10Q5VZ19 366 aaKnown RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 PRR23CQ6ZRP0 262 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 B3GALNT2Q8NCR0 500 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 ZNF516Q92618 1163 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 LOXL4Q96JB6 756 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 GZF1Q9H116 711 aaPredicted RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 XYLT2Q9H1B5 865 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 FBRSL1Q9HCM7 1045 aaKnown RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 EXOC1Q9NV70 894 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 NXF1Q9UBU9 619 aaKnown RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 RCOR1Q9UKL0 485 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 ATP8B3O60423 1300 aa20.75■□□□□ 0.91
R3HDM1-215ENST00000483021 ZNF840PA6NDX5 716 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 CLSTN1O94985 981 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 OLFM2O95897 454 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 CCDC192P0DO97 292 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 SLC7A9P82251 487 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 PSMD2Q13200 908 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 ZNF699Q32M78 642 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 SYT13Q7L8C5 426 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 CACNA2D4Q7Z3S7 1137 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 RPLP0P6Q8NHW5 317 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 TMEM174Q8WUU8 243 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 ZNF518BQ9C0D4 1074 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 DPEP3Q9H4B8 488 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 MYH10P35580 1976 aa20.74■□□□□ 0.91
R3HDM1-215ENST00000483021 LEFTY2O00292 366 aa20.73■□□□□ 0.91
R3HDM1-215ENST00000483021 MYL1P05976 194 aa20.73■□□□□ 0.91
R3HDM1-215ENST00000483021 CLDN10P78369 228 aa20.73■□□□□ 0.91
R3HDM1-215ENST00000483021 DNM1Q05193 864 aaKnown RBP20.73■□□□□ 0.91
R3HDM1-215ENST00000483021 ZNF667Q5HYK9 610 aa20.73■□□□□ 0.91
R3HDM1-215ENST00000483021 NAIF1Q69YI7 327 aaPredicted RBP20.73■□□□□ 0.91
R3HDM1-215ENST00000483021 DDX42Q86XP3 938 aaKnown RBP eCLIP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms