RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PDCL2Q8N4E4 241 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 IL17RCQ8NAC3 791 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 LEO1Q8WVC0 666 aaPredicted RBP20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 ACBD6Q9BR61 282 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 PARVGQ9HBI0 331 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 ZDHHC4Q9NPG8 344 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 SETXQ7Z333 2677 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 HELZP42694 1942 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 ANKRD63C9JTQ0 380 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 LEFTY2O00292 366 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 TRAK2O60296 914 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 HNRNPDQ14103 355 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 MAP7D1Q3KQU3 841 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 HYIQ5T013 277 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 EMC10Q5UCC4 262 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 SLFN12LQ6IEE8 588 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 RAB44Q7Z6P3 723 aaPredicted RBP20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 SFTPA1Q8IWL2 248 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 MINDY1Q8N5J2 469 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 KCTD17Q8N5Z5 321 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 LLPHQ9BRT6 129 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 AGAP1Q9UPQ3 857 aa20.34■□□□□ 0.85
NCKIPSD-209ENST00000470006 IGSF10Q6WRI0 2623 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 FAM221BA6H8Z2 402 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 VWA3AA6NCI4 1184 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 TISP43B9A030 160 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 SCAMP3O14828 347 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 KAT7O95251 611 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 CYP17A1P05093 508 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 SERPINF2P08697 491 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 POLR2BP30876 1174 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 HOXD12P35452 270 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 ATP2C1P98194 919 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 TFAMQ00059 246 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 KDSRQ06136 332 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 RESTQ13127 1097 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 HSF5Q4G112 596 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 OR2I1PQ8NGU4 316 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 CCDC86Q9H6F5 360 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 ARHGEF4Q9NR80 690 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 TRPM5Q9NZQ8 1165 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 L1RE1Q9UN81 338 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 LIMCH1Q9UPQ0 1083 aa20.33■□□□□ 0.85
NCKIPSD-209ENST00000470006 MYOFQ9NZM1 2061 aa20.33■□□□□ 0.84
NCKIPSD-209ENST00000470006 MYO18AQ92614 2054 aaKnown RBP20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 TBCAO75347 108 aaKnown RBP20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 IL18RAPO95256 599 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 ABL1P00519 1130 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 SYPP08247 313 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 TCF3P15923 654 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 DHCR24Q15392 516 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 TRIP6Q15654 476 aaKnown RBP20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 RABEPKQ7Z6M1 372 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 POMGNT1Q8WZA1 660 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 COL26A1Q96A83 441 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 CAMK1GQ96NX5 476 aa20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.32■□□□□ 0.84
NCKIPSD-209ENST00000470006 ARHGAP33O14559 1287 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 SLC9A3R1O14745 358 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 ZBTB24O43167 697 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 ITGB3P05106 788 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 ABCD1P33897 745 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 CCDC142Q17RM4 750 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 GAB4Q2WGN9 574 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 SLC36A4Q6YBV0 504 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 ADGRG2Q8IZP9 1017 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 TMEM86AQ8N2M4 240 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 PNPLA1Q8N8W4 532 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 HNRNPLLQ8WVV9 542 aaKnown RBP20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 KCNN1Q92952 543 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 SMPD4Q9NXE4 827 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 PLXND1Q9Y4D7 1925 aa20.31■□□□□ 0.84
NCKIPSD-209ENST00000470006 SH3BP5O60239 455 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 ZIC2O95409 532 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 ADH1CP00326 375 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 KRT19P08727 400 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 CD59P13987 128 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 ANXA13P27216 316 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 PCSK1P29120 753 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 GRIK1P39086 918 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 GRIA2P42262 883 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 ZXDBP98169 803 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 GTF2BQ00403 316 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 ZNF33AQ06730 810 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 MESP2Q0VG99 397 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 CFAP221Q4G0U5 840 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 TMEM119Q4V9L6 283 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 MCTP1Q6DN14 999 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 C4orf50Q6ZRC1 276 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 NT5DC4Q86YG4 428 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 CACTINQ8WUQ7 758 aaKnown RBP20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 CALML4Q96GE6 196 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 FUBP3Q96I24 572 aaKnown RBP eCLIP20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 CAPN10Q9HC96 672 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 MAGEC2Q9UBF1 373 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 SNX9Q9Y5X1 595 aa20.3■□□□□ 0.84
NCKIPSD-209ENST00000470006 LOC400499M0QZD8 3231 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 TBC1D3BA6NDS4 549 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms