RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 INO80B-WBP1J3KQ70 363 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 M0QZ92 97 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 B4GALT4O60513 344 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 ZNF623O75123 536 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 ZC3H11AO75152 810 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS41-211ENST00000466017 ATE1O95260 518 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CD4P01730 458 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 C4BPAP04003 597 aaKnown RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 VTNP04004 478 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 EDN1P05305 212 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CLTAP09496 248 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 IQCF3P0C7M6 154 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CCL5P13501 91 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 ARF4P18085 180 aaPredicted RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 HOXA11P31270 313 aaPredicted RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 HNRNPH3P31942 346 aaKnown RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 KCNJ6P48051 423 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 FMO5P49326 533 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CYP2J2P51589 502 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 MRPS6P82932 125 aaKnown RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 ZNF200P98182 395 aaPredicted RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 CDK17Q00537 523 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CYP24A1Q07973 514 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CETN1Q12798 172 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 SNX17Q15036 470 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 SNRNP35Q16560 246 aaKnown RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 PTGISQ16647 500 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 DCAF4L1Q3SXM0 396 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 XKR4Q5GH76 650 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 C1orf220Q5T0J3 134 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 KRT39Q6A163 491 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 OVOS1Q6IE37 1185 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 DPY19L2P1Q6NXN4 242 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 GBP6Q6ZN66 633 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 RUFY4Q6ZNE9 571 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 C15orf39Q6ZRI6 1047 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 FMNL3Q8IVF7 1028 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 SLITRK4Q8IW52 837 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 LRRC8AQ8IWT6 810 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CCDC150Q8NCX0 1101 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 LMO3Q8TAP4 145 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 CAGE1Q8TC20 777 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 SH3TC2Q8TF17 1288 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 SYN2Q92777 582 aaPredicted RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 ZBTB45Q96K62 511 aaPredicted RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 NLRP4Q96MN2 994 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 KREMEN1Q96MU8 473 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 PANX2Q96RD6 677 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 KRTAP4-12Q9BQ66 201 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 ADPGKQ9BRR6 497 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 SPON2Q9BUD6 331 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 NT5C1AQ9BXI3 368 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 TTYH3Q9C0H2 523 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 HAPLN2Q9GZV7 340 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 PCIF1Q9H4Z3 704 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 MINDY3Q9H8M7 445 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 TMEM8AQ9HCN3 771 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 STARD7Q9NQZ5 370 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 AGPAT5Q9NUQ2 364 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 DERAQ9Y315 318 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 TRIP12Q14669 1992 aaPredicted RBP5.92□□□□□ -1.46
VPS41-211ENST00000466017 MROH7Q68CQ1 1323 aa5.92□□□□□ -1.46
VPS41-211ENST00000466017 A0A1W2PQ45 241 aaPredicted RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 A0A1W2PQY0 241 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 AKR1B15C9JRZ8 316 aaPredicted RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 TSPAN1O60635 241 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 ERLIN2O94905 339 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 IL18RAPO95256 599 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CHRNA1P02708 482 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 TPM1P09493 284 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 FAM163BP0C2L3 166 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 SRFP11831 508 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 COL6A1P12109 1028 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 GJA8P48165 433 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 ZBED6P86452 979 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 NOLC1Q14978 699 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS41-211ENST00000466017 SYCP1Q15431 976 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 EXOC3L4Q17RC7 722 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 ZACNQ401N2 412 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 HSP90AA4PQ58FG1 418 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 RALGPS1Q5JS13 557 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 NOTUMQ6P988 496 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 ALKAL1Q6UXT8 129 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CCDC186Q7Z3E2 898 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 ANKRD33Q7Z3H0 272 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 TMC6Q7Z403 805 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 MRPL10Q7Z7H8 261 aaKnown RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 PPFIBP1Q86W92 1011 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CBWD2Q8IUF1 395 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CREBRFQ8IUR6 639 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 WDR49Q8IV35 697 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CNGA4Q8IV77 575 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 FAM126BQ8IXS8 530 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 DTWD2Q8NBA8 298 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 AGBL5Q8NDL9 886 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CCDC112Q8NEF3 446 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 ZNF397Q8NF99 534 aaPredicted RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 OR8K1Q8NGG5 319 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 PLEKHO2Q8TD55 490 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms