RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 FUBP3Q96I24 572 aaKnown RBP eCLIP19.29■□□□□ 0.68
CHCHD3-203ENST00000448878 ACCSQ96QU6 501 aa19.29■□□□□ 0.68
CHCHD3-203ENST00000448878 POLMQ9NP87 494 aaPredicted RBP19.29■□□□□ 0.68
CHCHD3-203ENST00000448878 ITGA11Q9UKX5 1188 aa19.29■□□□□ 0.68
CHCHD3-203ENST00000448878 WASF3Q9UPY6 502 aa19.29■□□□□ 0.68
CHCHD3-203ENST00000448878 HYAL3O43820 417 aaPredicted RBP19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 PDGFRBP09619 1106 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 SLC6A11P48066 632 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 LMBRD2Q68DH5 695 aaPredicted RBP19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 BRSK2Q8IWQ3 736 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 TOP6BLQ8N6T0 577 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 FRMD1Q8N878 549 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 WHAMMQ8TF30 809 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 HMGB4Q8WW32 186 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 ZCCHC14Q8WYQ9 949 aaKnown RBP19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 PNKPQ96T60 521 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 PKMYT1Q99640 499 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 SYT15Q9BQS2 421 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 PCIF1Q9H4Z3 704 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 SMPD4Q9NXE4 827 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 GDAP2Q9NXN4 497 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 KIAA1549LQ6ZVL6 1849 aa19.28■□□□□ 0.68
CHCHD3-203ENST00000448878 ATXN2Q99700 1313 aaKnown RBP19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 SRRM3A6NNA2 597 aaPredicted RBP19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 APODP05090 189 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 CFIP05156 583 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 ENGP17813 658 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 MAGEA11P43364 429 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 ZXDBP98169 803 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 IFRD2Q12894 506 aaPredicted RBP19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 MYO1EQ12965 1108 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 SOWAHAQ2M3V2 549 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 EMC10Q5UCC4 262 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 DENND5BQ6ZUT9 1274 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 SFTPA1Q8IWL2 248 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 ADGRG2Q8IZP9 1017 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 GATA6Q92908 595 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 MYLPFQ96A32 169 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 GTPBP2Q9BX10 602 aaKnown RBP19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 MTMR12Q9C0I1 747 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 PDE11AQ9HCR9 933 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 ZDHHC4Q9NPG8 344 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 TMEM74BQ9NUR3 256 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 EVLQ9UI08 416 aaPredicted RBP19.27■□□□□ 0.68
CHCHD3-203ENST00000448878 SPAARA0A1B0GVQ0 90 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 SGK1O00141 431 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 CYP17A1P05093 508 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 IDEP14735 1019 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 HNRNPLP14866 589 aaKnown RBP eCLIP19.26■□□□□ 0.673e-8■■■■□ 21.4
CHCHD3-203ENST00000448878 TCF3P15923 654 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 LMO2P25791 158 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 RDXP35241 583 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 P2RY2P41231 377 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 PTGER3P43115 390 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 KDSRQ06136 332 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 RESTQ13127 1097 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 BYSLQ13895 437 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 DHCR24Q15392 516 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 EOGTQ5NDL2 527 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 L1TD1Q5T7N2 865 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 FAM171BQ6P995 826 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 HS2ST1Q7LGA3 356 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 SYT12Q8IV01 421 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 HDDC3Q8N4P3 179 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 DEFB119Q8N690 84 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 IL17RCQ8NAC3 791 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 ANKRD36BP1Q96IX9 119 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 EPSTI1Q96J88 318 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 MMS19Q96T76 1030 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 KIF2CQ99661 725 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 TMEM121BQ9BXQ6 578 aaPredicted RBP19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 CCDC39Q9UFE4 941 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 CDH9Q9ULB4 789 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 PCDHB13Q9Y5F0 798 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 CPQQ9Y646 472 aa19.26■□□□□ 0.67
CHCHD3-203ENST00000448878 SLC9A3R1O14745 358 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 TNFRSF10BO14763 440 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 GABRDO14764 452 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 KAT7O95251 611 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 BMP15O95972 392 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 USP46P62068 366 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 SIM1P81133 766 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 MAPRE1Q15691 268 aaKnown RBP19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 LYSMD4Q5XG99 296 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 VSTM1Q6UX27 236 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 OLIG1Q8TAK6 271 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 HPDLQ96IR7 371 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 SPATA17Q96L03 361 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 FNBP1Q96RU3 617 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 RNF38Q9H0F5 515 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 FSCN3Q9NQT6 498 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 ARHGEF4Q9NR80 690 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 EHD2Q9NZN4 543 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 CFAP97Q9P2B7 532 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 ANAPC1Q9H1A4 1944 aa19.25■□□□□ 0.67
CHCHD3-203ENST00000448878 TCRBV21S2A2A0A5A6 115 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 PPP1R37O75864 691 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 TNNC2P02585 160 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms