RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 DCDC2BA2VCK2 349 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 SLC30A4O14863 429 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 RPP40O75818 363 aaKnown RBP22.14■■□□□ 1.13
CPNE1-219ENST00000440240 AKAP3O75969 853 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 HOXC13P31276 330 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 PXNP49023 591 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-219ENST00000440240 CYP24A1Q07973 514 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 EHHADHQ08426 723 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 EML3Q32P44 896 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 WDR72Q3MJ13 1102 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 NELFCDQ8IXH7 590 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 OR6B3Q8NGW1 331 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 SNX21Q969T3 373 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 C8orf48Q96LL4 319 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 TTLL2Q9BWV7 592 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 FAM13BQ9NYF5 915 aa22.14■■□□□ 1.13
CPNE1-219ENST00000440240 CCDC192P0DO97 292 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 ATICP31939 592 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 TNNC1P63316 161 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 NOP14P78316 857 aaKnown RBP22.13■■□□□ 1.13
CPNE1-219ENST00000440240 TRPC3Q13507 836 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 MDH1BQ5I0G3 518 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 SYT13Q7L8C5 426 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 C12orf56Q8IXR9 622 aa22.13■■□□□ 1.13
CPNE1-219ENST00000440240 MRPL45Q9BRJ2 306 aaKnown RBP22.13■■□□□ 1.13
CPNE1-219ENST00000440240 TPRP12270 2363 aaKnown RBP22.13■■□□□ 1.13
CPNE1-219ENST00000440240 NFATC1O95644 943 aa22.12■■□□□ 1.13
CPNE1-219ENST00000440240 STAU1O95793 577 aaKnown RBP22.12■■□□□ 1.13
CPNE1-219ENST00000440240 PTPN1P18031 435 aaKnown RBP22.12■■□□□ 1.13
CPNE1-219ENST00000440240 ATL3Q6DD88 541 aa22.12■■□□□ 1.13
CPNE1-219ENST00000440240 KIAA1958Q8N8K9 716 aa22.12■■□□□ 1.13
CPNE1-219ENST00000440240 SYAP1Q96A49 352 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-219ENST00000440240 BLZF1Q9H2G9 400 aa22.12■■□□□ 1.13
CPNE1-219ENST00000440240 LINC00597Q9H2U6 94 aa22.12■■□□□ 1.13
CPNE1-219ENST00000440240 OBSL1O75147 1896 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 ZNF840PA6NDX5 716 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 F8VP50 259 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 AXIN1O15169 862 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 ZSCAN22P10073 491 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-219ENST00000440240 RAP1GAPP47736 663 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 ME1P48163 572 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 USP46P62068 366 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 KNOP1Q1ED39 458 aaKnown RBP22.11■■□□□ 1.13
CPNE1-219ENST00000440240 BMT2Q1RMZ1 405 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 FOXD4L5Q5VV16 416 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-219ENST00000440240 TDRD10Q5VZ19 366 aaKnown RBP22.11■■□□□ 1.13
CPNE1-219ENST00000440240 RPLP0P6Q8NHW5 317 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 GOLGA5Q8TBA6 731 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 FOXD4L4Q8WXT5 416 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-219ENST00000440240 ACDQ96AP0 544 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 ELOVL4Q9GZR5 314 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 SLC39A2Q9NP94 309 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 PCDHA7Q9UN72 937 aa22.11■■□□□ 1.13
CPNE1-219ENST00000440240 ATG2BQ96BY7 2078 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 A8MXQ7 604 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 EXOC3O60645 756 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 PHACTR2O75167 634 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 HSP90AA1P07900 732 aaKnown RBP22.1■■□□□ 1.13
CPNE1-219ENST00000440240 SLC7A9P82251 487 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 PSMD2Q13200 908 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 NAIF1Q69YI7 327 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-219ENST00000440240 ZNF516Q92618 1163 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 ZC3H10Q96K80 434 aaKnown RBP22.1■■□□□ 1.13
CPNE1-219ENST00000440240 SLITRK1Q96PX8 696 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 ARRDC1-AS1Q9H2J1 176 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 NXF1Q9UBU9 619 aaKnown RBP22.1■■□□□ 1.13
CPNE1-219ENST00000440240 CFAP45Q9UL16 551 aa22.1■■□□□ 1.13
CPNE1-219ENST00000440240 LEFTY2O00292 366 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 APBB3O95704 486 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 ABL1P00519 1130 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 ZNF806P0C7X5 589 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 CASP1P29466 404 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 AP3M2P53677 418 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 MYL6P60660 151 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 DMC1Q14565 340 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 FOXD4L6Q3SYB3 417 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-219ENST00000440240 RESP18Q5W5W9 173 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 FOXD4L3Q6VB84 417 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-219ENST00000440240 KBTBD6Q86V97 674 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 CEP57L1Q8IYX8 460 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 C12orf50Q8NA57 414 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-219ENST00000440240 B3GALNT2Q8NCR0 500 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 DDX1Q92499 740 aaKnown RBP22.09■■□□□ 1.13
CPNE1-219ENST00000440240 XYLT2Q9H1B5 865 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 EBF1Q9UH73 591 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 NME7Q9Y5B8 376 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 PCDHGA5Q9Y5G8 931 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 RALGAPA1Q6GYQ0 2036 aa22.09■■□□□ 1.13
CPNE1-219ENST00000440240 SLC9A3R1O14745 358 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-219ENST00000440240 GDF9O60383 454 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 EPN2O95208 641 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 F13A1P00488 732 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 AFMP43652 599 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 ZXDBP98169 803 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 TAF10Q12962 218 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 CUL4BQ13620 913 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 ADGRG2Q8IZP9 1017 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 EZH1Q92800 747 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-219ENST00000440240 HHIPQ96QV1 700 aa22.08■■□□□ 1.13
CPNE1-219ENST00000440240 RNF38Q9H0F5 515 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms