RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 CTHP32929 405 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 MTF1Q14872 753 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
SNHG17-205ENST00000424235 SPOPLQ6IQ16 392 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 LIMS2Q7Z4I7 341 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 EEF2KMTQ96G04 330 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 SPATA17Q96L03 361 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 CYP2S1Q96SQ9 504 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 NACA2Q9H009 215 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 KRT82Q9NSB4 513 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 FBXO4Q9UKT5 387 aa17.14■□□□□ 0.33
SNHG17-205ENST00000424235 C2orf78A6NCI8 922 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 ARNTLO00327 626 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 IKBKBO14920 756 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 CETN3O15182 167 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 TADA3O75528 432 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 AKAP3O75969 853 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 VNN1O95497 513 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 FAM163BP0C2L3 166 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 CD58P19256 250 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 WEE1P30291 646 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 USP46P62068 366 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 AMPD2Q01433 879 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 STIM1Q13586 685 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 RUNX3Q13761 415 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 ZACNQ401N2 412 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 FAM35AQ86V20 835 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 CPA6Q8N4T0 437 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 TAF4BQ92750 862 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 ERCC4Q92889 916 aaPredicted RBP17.13■□□□□ 0.33
SNHG17-205ENST00000424235 FBXO32Q969P5 355 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 JAKMIP2Q96AA8 810 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 CLDN23Q96B33 292 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 SMARCD1Q96GM5 515 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 MYRFLQ96LU7 910 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 B3GNT5Q9BYG0 378 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 RBM12Q9NTZ6 932 aaKnown RBP17.13■□□□□ 0.33
SNHG17-205ENST00000424235 FAM49BQ9NUQ9 324 aa17.13■□□□□ 0.33
SNHG17-205ENST00000424235 DUS2Q9NX74 493 aaKnown RBP17.13■□□□□ 0.33
SNHG17-205ENST00000424235 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
SNHG17-205ENST00000424235 STX10O60499 249 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 AP1G2O75843 785 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 CCDC130P13994 396 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 ARSAP15289 507 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 ADORA2BP29275 332 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 CCR3P51677 355 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 NDST1P52848 882 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 NOP14P78316 857 aaKnown RBP17.12■□□□□ 0.33
SNHG17-205ENST00000424235 GRSF1Q12849 480 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNHG17-205ENST00000424235 PDGFRLQ15198 375 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 FMR1NBQ8N0W7 255 aaPredicted RBP17.12■□□□□ 0.33
SNHG17-205ENST00000424235 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 C8orf48Q96LL4 319 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 CHRDQ9H2X0 955 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 SEMA4AQ9H3S1 761 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
SNHG17-205ENST00000424235 SMPD4Q9NXE4 827 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 NME7Q9Y5B8 376 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
SNHG17-205ENST00000424235 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 MAPK13O15264 365 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 RTN3O95197 1032 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-205ENST00000424235 YWHAQP27348 245 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 CACNA2D1P54289 1103 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 CLDN10P78369 228 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 TAF10Q12962 218 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 ZNF268Q14587 947 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-205ENST00000424235 DGKKQ5KSL6 1271 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 NUP93Q8N1F7 819 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 ATP2A3Q93084 1043 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 CEP295NLQ96MC4 621 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 SLC22A12Q96S37 553 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 SDCBP2Q9H190 292 aa17.11■□□□□ 0.33
SNHG17-205ENST00000424235 EP300Q09472 2414 aaPredicted RBP17.1■□□□□ 0.33
SNHG17-205ENST00000424235 ASS1P00966 412 aaKnown RBP17.1■□□□□ 0.33
SNHG17-205ENST00000424235 MBL2P11226 248 aaPredicted RBP17.1■□□□□ 0.33
SNHG17-205ENST00000424235 PRCPP42785 496 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 CXCL12P48061 93 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 PPP3CCP48454 512 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 MXI1P50539 228 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 MLLT6P55198 1093 aaPredicted RBP17.1■□□□□ 0.33
SNHG17-205ENST00000424235 NR1H3Q13133 447 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 NFIL3Q16649 462 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 ZNF528Q3MIS6 628 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 WDR44Q5JSH3 913 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 ZNF658Q5TYW1 1059 aaPredicted RBP17.1■□□□□ 0.33
SNHG17-205ENST00000424235 Q6ZS52 159 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 PDZD8Q8NEN9 1154 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 SLC2A14Q8TDB8 520 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 TAS1R2Q8TE23 839 aa17.1■□□□□ 0.33
SNHG17-205ENST00000424235 GSDMAQ96QA5 445 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms