RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KIF3BO15066 747 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 KPNA5O15131 536 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 PMM2O15305 246 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 RRP9O43818 475 aaKnown RBP5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 TLR5O60602 858 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 RASSF9O75901 435 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 TTLL1O95922 423 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 TXNP10599 105 aaKnown RBP5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 TRIM27P14373 513 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 PTDSS1P48651 473 aaKnown RBP5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 ITGA8P53708 1063 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 SLC44A4Q53GD3 710 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 STRIP1Q5VSL9 837 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF551Q7Z340 670 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 RD3Q7Z3Z2 195 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 DNAJC10Q8IXB1 793 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 OSCP1Q8WVF1 389 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 TIMP4Q99727 224 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 NAA15Q9BXJ9 866 aaKnown RBP5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 NUP62CLQ9H1M0 184 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 CPNE5Q9HCH3 593 aa5.46□□□□□ -1.54
HMGB1P49-201ENST00000418882 LOC102723971A0A1B0GUV8 181 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 AGPSO00116 658 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 RAB27BO00194 218 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 SRGAP2O75044 1071 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 CTGFP29279 349 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 PRIM2P49643 509 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 CCT8P50990 548 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 PRKAG1P54619 331 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF543Q08ER8 600 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 CYP1B1Q16678 543 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 KLHDC7AQ5VTJ3 777 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 CACHD1Q5VU97 1274 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 LIX1LQ8IVB5 337 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 IZUMO1Q8IYV9 350 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 SOCS4Q8WXH5 440 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 SNX22Q96L94 193 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 HAPLN3Q96S86 360 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 PPP1R9BQ96SB3 815 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 MACROD1Q9BQ69 325 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 C17orf80Q9BSJ5 609 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 SERGEFQ9UGK8 458 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 HDAC9Q9UKV0 1011 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 SNX13Q9Y5W8 968 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 SPATA31A6Q5VVP1 1343 aa5.45□□□□□ -1.54
HMGB1P49-201ENST00000418882 A0A087WZ62 844 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 NXPH3O95157 252 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 MT-ND5P03915 603 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 MYL3P08590 195 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 HGFP14210 728 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 TSHRP16473 764 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 ENGP17813 658 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 WT1P19544 449 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 ACVR2AP27037 513 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 CYP2C18P33260 490 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 CARSP49589 748 aaKnown RBP5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 CASP5P51878 434 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 TBX4P57082 545 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 KCNAB1Q14722 419 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 SAFBQ15424 915 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 TEDDM1Q5T9Z0 273 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 GRASPQ7Z6J2 395 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 RNF152Q8N8N0 203 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 XAGE5Q8WWM1 108 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 SARAFQ96BY9 339 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZBTB45Q96K62 511 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 CRAMP1Q96RY5 1269 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 TRIM5Q9C035 493 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 DUSP22Q9NRW4 184 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 GJB4Q9NTQ9 266 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 ITGB1BP2Q9UKP3 347 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 COX11Q9Y6N1 276 aa5.44□□□□□ -1.54
HMGB1P49-201ENST00000418882 RHPN2P1A8MT19 583 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 OVOL3O00110 214 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 CD3EAPO15446 510 aaKnown RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 CCP110O43303 1012 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 RASAL1O95294 804 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 NHLRC4P0CG21 123 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 BTF3P20290 206 aaKnown RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 DAG1Q14118 895 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 ARHGEF7Q14155 803 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF750Q32MQ0 723 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 KSR2Q6VAB6 950 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 CAND1Q86VP6 1230 aaKnown RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 REPS1Q96D71 796 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 LENG8Q96PV6 779 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 TBCBQ99426 244 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 BRIP1Q9BX63 1249 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 UNKQ9C0B0 810 aaKnown RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZSCAN32Q9NX65 697 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 DKK4Q9UBT3 224 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 RGS17Q9UGC6 210 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 GABRQQ9UN88 632 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 SH2B3Q9UQQ2 575 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 PAXBP1Q9Y5B6 917 aa5.43□□□□□ -1.54
HMGB1P49-201ENST00000418882 POM121BA6NF01 834 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 ORC4O43929 436 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms