RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 VEPH1Q14D04 833 aa32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 PKDCCQ504Y2 493 aa32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 SMYD5Q6GMV2 418 aa32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 GADD45GIP1Q8TAE8 222 aaPredicted RBP32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 MAGED2Q9UNF1 606 aaPredicted RBP32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP32.36■■■□□ 2.772e-6■■□□□ 11.5
CSNK1E-206ENST00000413574 SLC38A8A6NNN8 435 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 CASP14P31944 242 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 STILQ15468 1287 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 TAF3Q5VWG9 929 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 E4F1Q66K89 784 aaPredicted RBP32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 DENND1BQ6P3S1 775 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 TMC6Q7Z403 805 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 EPS8L1Q8TE68 723 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 SPATA17Q96L03 361 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 ZNF334Q9HCZ1 680 aaPredicted RBP32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 CAPN11Q9UMQ6 739 aa32.35■■■□□ 2.77
CSNK1E-206ENST00000413574 A0A1W2PQJ5 194 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 HHLA1C9JL84 531 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 MED7O43513 233 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 POU2F2P09086 479 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 HMGA1P17096 107 aaKnown RBP32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 BCAT1P54687 386 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 USP46P62068 366 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 LEXMQ3ZCV2 418 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 GPRIN1Q7Z2K8 1008 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 SLC20A1Q8WUM9 679 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 DDX1Q92499 740 aaKnown RBP32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 SECISBP2LQ93073 1101 aaKnown RBP32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 MRFAP1L1Q96HT8 127 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 MYO6Q9UM54 1294 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 ASB3Q9Y575 518 aa32.34■■■□□ 2.77
CSNK1E-206ENST00000413574 MBTPS2O43462 519 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 PTPN2P17706 415 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 PDE6CP51160 858 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 IFRD2Q12894 506 aaPredicted RBP32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 ATAT1Q5SQI0 421 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 PASD1Q8IV76 773 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 LRRC3Q9BY71 257 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 NRG2O14511 850 aaPredicted RBP32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 TNFRSF10BO14763 440 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 RHOP08100 348 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 BST2Q10589 180 aaKnown RBP32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 TAF12Q16514 161 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 DENND5BQ6ZUT9 1274 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 IRF2BP2Q7Z5L9 587 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 ITIH5Q86UX2 942 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 TMC8Q8IU68 726 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 SCAMP5Q8TAC9 235 aa32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 NOCTQ9UK39 431 aaKnown RBP32.33■■■□□ 2.77
CSNK1E-206ENST00000413574 GOLGA8FQ08AF8 430 aa32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 GOLGA8DPQ0D2H9 430 aa32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 SMAD4Q13485 552 aaKnown RBP32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 PIGZQ86VD9 579 aa32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 SUSD6Q92537 303 aa32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 THEGQ9P2T0 379 aa32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 LUC7L2Q9Y383 392 aaKnown RBP32.32■■■□□ 2.76
CSNK1E-206ENST00000413574 FAM170AA1A519 330 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 MMEP08473 750 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 CSH1P0DML2 217 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 CSH2P0DML3 217 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 KRT9P35527 623 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 CCR2P41597 374 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 SLC5A3P53794 718 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 ZBED6P86452 979 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 PABPC1LQ4VXU2 614 aaKnown RBP32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 SFMBT2Q5VUG0 894 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 CYP26C1Q6V0L0 522 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 NUP93Q8N1F7 819 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 IQCDQ96DY2 449 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 RIPOR3Q96MK2 946 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 POMKQ9H5K3 350 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 ASAH2Q9NR71 780 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 DENND4AQ7Z401 1863 aa32.31■■■□□ 2.76
CSNK1E-206ENST00000413574 XPO1O14980 1071 aaKnown RBP32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 ADCY5O95622 1261 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 MYL4P12829 197 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 FERP16591 822 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 SLC8A3P57103 927 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 CBX2Q14781 532 aaPredicted RBP32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 SLC5A9Q2M3M2 681 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 ZNF397Q8NF99 534 aaPredicted RBP32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 SLC35F5Q8WV83 523 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 TCEAL4Q96EI5 215 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 PCDHGC3Q9UN70 934 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 MYO16Q9Y6X6 1858 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 OBSL1O75147 1896 aa32.3■■■□□ 2.76
CSNK1E-206ENST00000413574 GOLGA6L3A6NEY3 463 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 CHRNB2P17787 502 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 GPD2P43304 727 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 RGS7P49802 495 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 ASIC2Q16515 512 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 PTCRAQ6ISU1 281 aaPredicted RBP32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 PMF1Q6P1K2 205 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 WDR6Q9NNW5 1121 aaKnown RBP32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 AIPL1Q9NZN9 384 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 CYTH4Q9UIA0 394 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 SETSIPP0DME0 302 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 GJA1P17302 382 aa32.29■■■□□ 2.76
CSNK1E-206ENST00000413574 MTHFRP42898 656 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms