RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PRDX6P30041 224 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 DMPKQ09013 629 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ATP1A4Q13733 1029 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SF3B3Q15393 1217 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SF3B4Q15427 424 aaKnown RBP eCLIP9.97□□□□□ -0.811e-12■■■■■ 43.6
SF3A3-201ENST00000373019 CNGA3Q16281 694 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 TPTE2Q6XPS3 522 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 PPP4R3CPQ6ZMV5 832 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 BORCS5Q969J3 196 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 ANKRD36BP1Q96IX9 119 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 RIOK1Q9BRS2 568 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 MRPL46Q9H2W6 279 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SCHIP1Q9P0W5 487 aaPredicted RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 CNTN3Q9P232 1028 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
SF3A3-201ENST00000373019 DNAJC12Q9UKB3 198 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 POMPQ9Y244 141 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 N6AMT1Q9Y5N5 214 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 SNX9Q9Y5X1 595 aa9.97□□□□□ -0.81
SF3A3-201ENST00000373019 EML1O00423 815 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 PTPN2P17706 415 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 GABRB3P28472 473 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 SERPINB6P35237 376 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 PDIA2Q13087 525 aaKnown RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 UBAP2LQ14157 1087 aaKnown RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 HERC4Q5GLZ8 1057 aaPredicted RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 GALNT4Q8N4A0 578 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 EME1Q96AY2 570 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 PLVAPQ9BX97 442 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 VTA1Q9NP79 307 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 KCNK4Q9NYG8 393 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 PSMC3IPQ9P2W1 217 aaPredicted RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 VPS51Q9UID3 782 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 GNEQ9Y223 722 aaKnown RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 ITM2BQ9Y287 266 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.817e-6■■■■■ 91.9
SF3A3-201ENST00000373019 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 PIK3CDO00329 1044 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 MTA2O94776 668 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 ENDOUP21128 410 aaKnown RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 TCEA1P23193 301 aaKnown RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 GSSP48637 474 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 GPC5P78333 572 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 E2F2Q14209 437 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 CHSY1Q86X52 802 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 NACC2Q96BF6 587 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 FAM118BQ9BPY3 351 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 NYXQ9GZU5 481 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 GIN1Q9NXP7 522 aa9.96□□□□□ -0.81
SF3A3-201ENST00000373019 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.81
SF3A3-201ENST00000373019 ITGB4P16144 1822 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 F5H6K3 240 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 KLRC2P26717 231 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 MZF1P28698 734 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-201ENST00000373019 NDST2P52849 883 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 EPHB1P54762 984 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 RWDD4Q6NW29 188 aaKnown RBP9.96□□□□□ -0.82
SF3A3-201ENST00000373019 PCYOX1LQ8NBM8 494 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 JADE3Q92613 823 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 CCDC124Q96CT7 223 aaKnown RBP9.96□□□□□ -0.82
SF3A3-201ENST00000373019 CTRCQ99895 268 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 CENPOQ9BU64 300 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 CEP44Q9C0F1 390 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 EHD1Q9H4M9 534 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 SLC24A2Q9UI40 661 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 CDH22Q9UJ99 828 aa9.96□□□□□ -0.82
SF3A3-201ENST00000373019 ANKRD34BA5PLL1 514 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 CALCRLQ16602 461 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 LMBRD2Q68DH5 695 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 KRT25Q7Z3Z0 450 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 GPR180Q86V85 440 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 HPS6Q86YV9 775 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TSPAN14Q8NG11 270 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TBC1D15Q8TC07 691 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 AGPAT1Q99943 283 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 IVNS1ABPQ9Y6Y0 642 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 E9PMD0 336 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TRPA1O75762 1119 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 FBXO21O94952 628 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 HSPA8P11142 646 aaKnown RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 CYP7A1P22680 504 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 ALDH18A1P54886 795 aaKnown RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 C21orf59P57076 290 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 GPX6P59796 221 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 CLEC16AQ2KHT3 1053 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 EFHC2Q5JST6 749 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TCHHL1Q5QJ38 904 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 PPP1R2P3Q6NXS1 205 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 GLIS1Q8NBF1 620 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 MORC4Q8TE76 937 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 GJA10Q969M2 543 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 EFHD2Q96C19 240 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 NLRP4Q96MN2 994 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 DCUN1D5Q9BTE7 237 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 Q9H521 79 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 SACM1LQ9NTJ5 587 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 CDH7Q9ULB5 785 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 STRIP2Q9ULQ0 834 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms