RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PRKCQQ04759 706 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 TTC39CQ8N584 583 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 LMO3Q8TAP4 145 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 SLC2A14Q8TDB8 520 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 SMARCD1Q96GM5 515 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 MED10Q9BTT4 135 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 NUP62CLQ9H1M0 184 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 BRD9Q9H8M2 597 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 TBC1D17Q9HA65 648 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 CISHQ9NSE2 258 aa21.26■□□□□ 0.99
TMEM53-205ENST00000372244 ATP8B3O60423 1300 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 SHISA7A6NL88 538 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 CHADO15335 359 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 FGFR1OPO95684 399 aaKnown RBP21.25■□□□□ 0.99
TMEM53-205ENST00000372244 CCDC130P13994 396 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 CD58P19256 250 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 GDI1P31150 447 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 AVPR1AP37288 418 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 PPP3CCP48454 512 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 MLF2Q15773 248 aaPredicted RBP21.25■□□□□ 0.99
TMEM53-205ENST00000372244 NUP93Q8N1F7 819 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 CELF5Q8N6W0 485 aaKnown RBP21.25■□□□□ 0.99
TMEM53-205ENST00000372244 ZMIZ2Q8NF64 920 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 GPT2Q8TD30 523 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 USP13Q92995 863 aaPredicted RBP21.25■□□□□ 0.99
TMEM53-205ENST00000372244 CYFIP2Q96F07 1278 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 CYP2S1Q96SQ9 504 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 SMOQ99835 787 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 ARID3AQ99856 593 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 SMG9Q9H0W8 520 aaKnown RBP21.25■□□□□ 0.99
TMEM53-205ENST00000372244 DMAP1Q9NPF5 467 aaPredicted RBP21.25■□□□□ 0.99
TMEM53-205ENST00000372244 TDP1Q9NUW8 608 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 GCNT4Q9P109 453 aa21.25■□□□□ 0.99
TMEM53-205ENST00000372244 ZNF840PA6NDX5 716 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 DPYSL4O14531 572 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 ZNF263O14978 683 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 AP1G2O75843 785 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 BEST1O76090 585 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 KCNH2Q12809 1159 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 IRF2BP1Q8IU81 584 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 SLC22A12Q96S37 553 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 HEBP1Q9NRV9 189 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 FAM49BQ9NUQ9 324 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 CCL26Q9Y258 94 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 GREB1Q4ZG55 1949 aa21.24■□□□□ 0.99
TMEM53-205ENST00000372244 TRIM21P19474 475 aaKnown RBP21.23■□□□□ 0.99
TMEM53-205ENST00000372244 RAD23BP54727 409 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 MLLT6P55198 1093 aaPredicted RBP21.23■□□□□ 0.99
TMEM53-205ENST00000372244 TAF10Q12962 218 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 CUL2Q13617 745 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 ZNF268Q14587 947 aaPredicted RBP21.23■□□□□ 0.99
TMEM53-205ENST00000372244 BPIFB1Q8TDL5 484 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 PRRX2Q99811 253 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 KRT82Q9NSB4 513 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 COMMD8Q9NX08 183 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 TRPM5Q9NZQ8 1165 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 DENND4CQ5VZ89 1909 aa21.23■□□□□ 0.99
TMEM53-205ENST00000372244 KANSL1LA0AUZ9 987 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 FAM92AA1XBS5 289 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 C2orf78A6NCI8 922 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 STK25O00506 426 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 RTN3O95197 1032 aaPredicted RBP21.22■□□□□ 0.99
TMEM53-205ENST00000372244 CCDC192P0DO97 292 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 PFKLP17858 780 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 YWHAQP27348 245 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 YAF2Q8IY57 180 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 SLC4A11Q8NBS3 891 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 SCAMP5Q8TAC9 235 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 TMEM176AQ96HP8 235 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 HEXIM2Q96MH2 286 aaKnown RBP21.22■□□□□ 0.99
TMEM53-205ENST00000372244 DNAI2Q9GZS0 605 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 SIT1Q9Y3P8 196 aa21.22■□□□□ 0.99
TMEM53-205ENST00000372244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.22■□□□□ 0.99
TMEM53-205ENST00000372244 GLULP15104 373 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 CETN1Q12798 172 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 DPCR1Q3MIW9 517 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 ARHGAP29Q52LW3 1261 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 ZNF394Q53GI3 561 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 RBM43Q6ZSC3 357 aaKnown RBP21.21■□□□□ 0.99
TMEM53-205ENST00000372244 UBR7Q8N806 425 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 EHBP1Q8NDI1 1231 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 OVCA2Q8WZ82 227 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 OSBPL6Q9BZF3 934 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 KIF9Q9HAQ2 790 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 DLGAP2Q9P1A6 1054 aa21.21■□□□□ 0.99
TMEM53-205ENST00000372244 TRAV19A0A0A6YYK7 116 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 HHLA1C9JL84 531 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 USP17L7P0C7H9 530 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 FAM200BP0CF97 657 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 HDCP19113 662 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 ERCC5P28715 1186 aaPredicted RBP21.2■□□□□ 0.98
TMEM53-205ENST00000372244 SLC5A3P53794 718 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 MAP3K7CLP57077 242 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 PLCB2Q00722 1185 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 CT47A1Q5JQC4 288 aaPredicted RBP21.2■□□□□ 0.98
TMEM53-205ENST00000372244 PPP1R26Q5T8A7 1209 aaPredicted RBP21.2■□□□□ 0.98
TMEM53-205ENST00000372244 SNX30Q5VWJ9 437 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 CLEC20AQ6ZU45 233 aa21.2■□□□□ 0.98
TMEM53-205ENST00000372244 ARL14EPQ8N8R7 260 aaPredicted RBP21.2■□□□□ 0.98
TMEM53-205ENST00000372244 PRSS33Q8NF86 280 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms